Homology
BLAST of mRNA_P-canaliculata_contig100742.148.1 vs. uniprot
Match:
A0A518EUS2_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EUS2_9BACT)
HSP 1 Score: 251 bits (642), Expect = 1.220e-78
Identity = 115/170 (67.65%), Postives = 141/170 (82.94%), Query Frame = 1
Query: 25 CAGPGTERNLAPLFSSFSAADDATEVEALGGMVLTRRDPVTGERDYWAVRPIVSNRYKENGDRFAWFLPPLGFSSKDAGTGTRIAQLLPIARYHTSQEVSGFWNWSLLVIPGIYWASHGDGRVQRAFFPFYGVFEKFLSVDRARFLLFPLWFQVQRYGRTTNHYLFPIFA 534
CAGP +ER L+PLFSS SAA E+EALGG L+RR+P TG+RDYWA+RP++SNR+ E GDRF WFLPPLGF +D+ GTR+AQ +P+ARY T +E SGF WSLLVIPG+YW++H DGRVQRAFFPF+GV EKFLS+DR F LFPLW +V+RYGRTT+H+LFPIF+
Sbjct: 11 CAGPNSERVLSPLFSSHSAAGGIPEIEALGGAYLSRRNPSTGQRDYWAIRPLLSNRFDEKGDRFTWFLPPLGFIDEDSERGTRVAQFVPLARYATLREESGFKTWSLLVIPGLYWSAHEDGRVQRAFFPFFGVVEKFLSLDRGTFALFPLWLRVERYGRTTDHFLFPIFS 180
BLAST of mRNA_P-canaliculata_contig100742.148.1 vs. uniprot
Match:
A0A523PG03_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PG03_9BACT)
HSP 1 Score: 164 bits (414), Expect = 6.930e-45
Identity = 82/170 (48.24%), Postives = 108/170 (63.53%), Query Frame = 1
Query: 25 CAGPGTERNLAPLFSSFSAADDATEVEALGGMVLTRRDPVTGERDYWAVRPIVSNRYKENGDRFAWFLPPLGFSSKDAGTGTRIAQLLPIARYHTSQEVSGFWNWSLLVIPGIYWASHGDGRVQRAFFPFYGVFEKFLSVDRARFLLFPLWFQVQRYGRTTNHYLFPIFA 534
CA ER++AP+FS FS A E++GGM ++ + + G DYWA+RP+ S R ENG+RF WFLPPLG + R+ QLLPIARY + WS L +PGIYWA DGR+ RA+FPF GV ++F S DR F +FPL+ + +R GR T H+LFPIF+
Sbjct: 37 CASVYDERHVAPVFSRFSPAGGGIGTESVGGMFVSHKPGLEGPLDYWAIRPLYSKRVAENGNRFYWFLPPLG--TYKVRERERVWQLLPIARYQWRLDEGDTERWSFLSLPGIYWAKTSDGRIVRAWFPFGGVADEFFSFDRLEFFMFPLFVRTERNGRRTTHFLFPIFS 204
BLAST of mRNA_P-canaliculata_contig100742.148.1 vs. uniprot
Match:
A0A2D5W8Y1_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W8Y1_9BACT)
HSP 1 Score: 150 bits (379), Expect = 1.130e-39
Identity = 84/173 (48.55%), Postives = 104/173 (60.12%), Query Frame = 1
Query: 16 LGACAGPGTERNLAPLFSSFSAADDATEVEALGGMVLTRRDPVTGERDYWAVRPIVSNRYKENGDRFAWFLPPLGFSSKDAGTGTRIAQLLPIARYHTSQEVSGFWNWSLLVIPGIYWASHGDGRVQRAFFPFYGVFEKFLSVDRARFLLFPLWFQVQRYGRTTNHYLFPIFA 534
L +CA ER+LAPLF+ S A+ E EALGG+ +RR G WA+RP S K +G+ + FLPPLG S A I Q LPI RY S + G WSLL +PG+YW+ DGRV RA FP GV E+ +S DR FLLFPL+ Q QR+GRTT H+L P F+
Sbjct: 41 LSSCASFDQERHLAPLFTQLSLAEGGVETEALGGLWKSRRHVPGGVASSWALRPFFSRSVKWDGETSSQFLPPLG--SAHASHNEWIWQFLPIVRYQRSVDELGREEWSLLALPGVYWSKKTDGRVLRAAFPIAGVLERSMSYDRVAFLLFPLFAQTQRHGRTTWHFLAPFFS 211
BLAST of mRNA_P-canaliculata_contig100742.148.1 vs. uniprot
Match:
A0A518D2Y2_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518D2Y2_9BACT)
HSP 1 Score: 94.7 bits (234), Expect = 2.120e-19
Identity = 66/194 (34.02%), Postives = 100/194 (51.55%), Query Frame = 1
Query: 1 LGLLGLGACAGPGTERNLAPLFSSFSAADDATEVEALGGMVLTRRDPVTGERDYWAVRPIVSNRYKENGDRFAWFLPPLGF--SSKDAGTGTRIAQLLPIARYHTSQEVSGFWNWS----------------LLVIPGIYWASHGDGRVQRAFFPFYGVFEKFLSVDRARFLLFPLWFQVQRYGRTTNHYLFPI 528
L L+ ACA ++ +LAP ++ + ADD E EALGG L RR TGE + A++P+VS R + FL PLG+ S D+ G +LP+ + T+ G W++ +L++PG W+ + G + FP YG +KFL+ DR RF+LFPL+ +R T++ LFP+
Sbjct: 20 LALVLTSACASVDSDIHLAPFWTQSATADDRIEREALGGAYLERRFEPTGELEVRALKPLVSWRQVGPEEEKVEFLAPLGYWRSKVDSTWGL----MLPLLYWRTAP---GDWSFEARGVEAPPEAPEREIDVLLLPGFIWSRNARGASKFGIFPIYGELDKFLTWDRVRFVLFPLYVSARRGKSVTHNVLFPV 206
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100742.148.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 4
0 1 Expect = 1.22e-78 / Id = 67.65 Expect = 6.93e-45 / Id = 48.24 Expect = 1.13e-39 / Id = 48.55 Expect = 2.12e-19 / Id = 34.02 Sequence A0A518EUS2_9BACT A0A523PG03_9BACT A0A2D5W8Y1_9BACT A0A518D2Y2_9BACT back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Hectar predicted targeting category other localisation Exons 1 Model size 534 Cds size 534 Stop 0 Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815581.2695994-CDS-P-canaliculata_contig100742:477..1011 1622815581.2695994-CDS-P-canaliculata_contig100742:477..1011 Pelvetia canaliculata dioecious CDS P-canaliculata_contig100742 478..1011 + 1693494149.2320297-CDS-P-canaliculata_contig100742:477..1011 1693494149.2320297-CDS-P-canaliculata_contig100742:477..1011 Pelvetia canaliculata dioecious CDS P-canaliculata_contig100742 478..1011 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig100742.148.1
>prot_P-canaliculata_contig100742.148.1 ID=prot_P-canaliculata_contig100742.148.1|Name=mRNA_P-canaliculata_contig100742.148.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=178bp
LGLLGLGACAGPGTERNLAPLFSSFSAADDATEVEALGGMVLTRRDPVTG back to top mRNA from alignment at P-canaliculata_contig100742:478..1011+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig100742.148.1 ID=mRNA_P-canaliculata_contig100742.148.1|Name=mRNA_P-canaliculata_contig100742.148.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=534bp|location=Sequence derived from alignment at P-canaliculata_contig100742:478..1011+ (Pelvetia canaliculata dioecious)CTAGGGCTCCTCGGGCTTGGTGCCTGCGCGGGTCCGGGCACGGAACGTAA
CCTGGCGCCACTCTTCTCGTCGTTCTCTGCGGCCGACGACGCCACCGAGG
TGGAGGCCCTTGGCGGGATGGTCCTCACTAGGCGAGACCCCGTCACCGGC
GAACGGGACTACTGGGCGGTGCGGCCCATCGTCTCCAATCGCTATAAGGA
AAACGGTGATCGCTTCGCCTGGTTCCTGCCGCCCCTTGGCTTCAGCAGCA
AAGACGCCGGGACCGGAACCCGAATAGCCCAACTCCTCCCCATCGCGCGC
TACCACACCTCCCAAGAGGTCAGTGGTTTCTGGAACTGGTCGCTGCTAGT
CATTCCGGGGATCTACTGGGCCTCCCACGGCGACGGGCGCGTGCAGAGGG
CCTTCTTCCCCTTCTACGGCGTCTTTGAGAAGTTCCTGTCCGTCGACCGT
GCGCGCTTCCTGCTGTTTCCATTGTGGTTCCAGGTCCAACGCTACGGCCG
CACGACCAACCACTATCTCTTCCCGATCTTCGCG back to top Coding sequence (CDS) from alignment at P-canaliculata_contig100742:478..1011+
>mRNA_P-canaliculata_contig100742.148.1 ID=mRNA_P-canaliculata_contig100742.148.1|Name=mRNA_P-canaliculata_contig100742.148.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1068bp|location=Sequence derived from alignment at P-canaliculata_contig100742:478..1011+ (Pelvetia canaliculata dioecious) back to top