Homology
BLAST of mRNA_P-canaliculata_contig10073.147.1 vs. uniprot
Match:
A0A6H5KBQ9_9PHAE (PHB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBQ9_9PHAE)
HSP 1 Score: 169 bits (427), Expect = 3.000e-49
Identity = 87/103 (84.47%), Postives = 92/103 (89.32%), Query Frame = 3
Query: 3 ESKYLSGVGVSRQRKAIVDGLRDSVQTFSDTIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRSSTVFLPHAPQSVEALQSAMRDGFMQASAGQVGAHQPQQIKR 311
ESKYLSGVGVSRQRKAIVDGLRDSVQTFS+TIDGTSPKDVMDLLLLTQYFDMLRDVGQSSR++TVFLPHAPQSV +LQSAMRDGFMQ AG G Q + R
Sbjct: 262 ESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVASLQSAMRDGFMQGHAGSEGLASAQMMNR 364
BLAST of mRNA_P-canaliculata_contig10073.147.1 vs. uniprot
Match:
A0A6H5KP74_9PHAE (PHB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP74_9PHAE)
HSP 1 Score: 160 bits (405), Expect = 8.160e-48
Identity = 81/98 (82.65%), Postives = 87/98 (88.78%), Query Frame = 3
Query: 3 ESKYLSGVGVSRQRKAIVDGLRDSVQTFSDTIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRSSTVFLPHAPQSVEALQSAMRDGFMQASAGQVGAHQP 296
ESKYLSGVGVSRQRKAIVDGLRDSVQ F++ IDGTSPKDVMDLLLLTQYFDMLRDVGQSSR++TVFLPHAPQSV A+Q+AMRDGFMQ AG P
Sbjct: 97 ESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTETPPP 194
BLAST of mRNA_P-canaliculata_contig10073.147.1 vs. uniprot
Match:
D8LDT1_ECTSI (PHB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDT1_ECTSI)
HSP 1 Score: 160 bits (405), Expect = 1.540e-45
Identity = 81/98 (82.65%), Postives = 87/98 (88.78%), Query Frame = 3
Query: 3 ESKYLSGVGVSRQRKAIVDGLRDSVQTFSDTIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRSSTVFLPHAPQSVEALQSAMRDGFMQASAGQVGAHQP 296
ESKYLSGVGVSRQRKAIVDGLRDSVQ F++ IDGTSPKDVMDLLLLTQYFDMLRDVGQSSR++TVFLPHAPQSV A+Q+AMRDGFMQ AG P
Sbjct: 303 ESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTETPPP 400
BLAST of mRNA_P-canaliculata_contig10073.147.1 vs. uniprot
Match:
A0A835YL74_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL74_9STRA)
HSP 1 Score: 148 bits (373), Expect = 6.430e-42
Identity = 72/93 (77.42%), Postives = 85/93 (91.40%), Query Frame = 3
Query: 3 ESKYLSGVGVSRQRKAIVDGLRDSVQTFSDTIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRSSTVFLPHAPQSVEALQSAMRDGFMQASAGQV 281
ESKYLSGVGVSRQR+AIV GLRDS+ FS +I+GT+PKDVMDLLLLTQYFDMLRD+GQS++SST+FLPHAP+SV +LQ AMRDGFMQA+A +
Sbjct: 194 ESKYLSGVGVSRQRQAIVAGLRDSIHDFSSSIEGTTPKDVMDLLLLTQYFDMLRDIGQSTKSSTIFLPHAPESVASLQGAMRDGFMQAAAAKA 286
BLAST of mRNA_P-canaliculata_contig10073.147.1 vs. uniprot
Match:
A0A7S4IJZ4_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IJZ4_9EUKA)
HSP 1 Score: 124 bits (312), Expect = 8.030e-33
Identity = 57/87 (65.52%), Postives = 78/87 (89.66%), Query Frame = 3
Query: 3 ESKYLSGVGVSRQRKAIVDGLRDSVQTFSDTIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRSSTVFLPHAPQSVEALQSAMRDGFMQ 263
ESKYLSGVG++RQRKAIV+GL++SV TF+D+++GTS KDVMDL+L+TQYFD L+D+G +S+SST+F+PH+P SV ++ +RDGFMQ
Sbjct: 194 ESKYLSGVGIARQRKAIVEGLQESVTTFADSVEGTSAKDVMDLVLVTQYFDTLKDLGSNSKSSTIFIPHSPGSVGSVAEQVRDGFMQ 280
BLAST of mRNA_P-canaliculata_contig10073.147.1 vs. uniprot
Match:
A0A816WVN1_BRANA ((rape) hypothetical protein n=2 Tax=Brassica TaxID=3705 RepID=A0A816WVN1_BRANA)
HSP 1 Score: 117 bits (294), Expect = 6.250e-32
Identity = 54/92 (58.70%), Postives = 76/92 (82.61%), Query Frame = 3
Query: 3 ESKYLSGVGVSRQRKAIVDGLRDSVQTFSDTIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRSSTVFLPHAPQSVEALQSAMRDGFMQASAGQ 278
ESKYLSG+G++RQR+AIVDGLR+SV FS+++ GTS KDVMD++L+TQYFD L+D+G SS+S+ VF+PH P +V+ + S +RDG +Q A +
Sbjct: 37 ESKYLSGLGIARQRQAIVDGLRNSVLAFSESVPGTSSKDVMDMVLVTQYFDTLKDIGASSKSNAVFIPHGPGAVKDIASQIRDGLLQGKAAE 128
BLAST of mRNA_P-canaliculata_contig10073.147.1 vs. uniprot
Match:
M1D6E3_SOLTU (Hypersensitive-induced reaction protein n=1 Tax=Solanum tuberosum TaxID=4113 RepID=M1D6E3_SOLTU)
HSP 1 Score: 117 bits (294), Expect = 1.440e-31
Identity = 57/89 (64.04%), Postives = 73/89 (82.02%), Query Frame = 3
Query: 3 ESKYLSGVGVSRQRKAIVDGLRDSVQTFSDTIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRSSTVFLPHAPQSVEALQSAMRDGFMQAS 269
ESKYLSG+G++RQR+AIVDGLRDSV FS + GTS KDVMD++LLTQYFD ++++G SS+SS VFLPH P +V + S +RDG +QAS
Sbjct: 66 ESKYLSGLGIARQRQAIVDGLRDSVLGFSVNVPGTSAKDVMDMVLLTQYFDTMKEIGASSKSSAVFLPHGPGAVRDVASQIRDGLLQAS 154
BLAST of mRNA_P-canaliculata_contig10073.147.1 vs. uniprot
Match:
A0A453KP95_AEGTS (Uncharacterized protein n=4 Tax=Triticeae TaxID=147389 RepID=A0A453KP95_AEGTS)
HSP 1 Score: 116 bits (291), Expect = 1.590e-31
Identity = 52/89 (58.43%), Postives = 76/89 (85.39%), Query Frame = 3
Query: 3 ESKYLSGVGVSRQRKAIVDGLRDSVQTFSDTIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRSSTVFLPHAPQSVEALQSAMRDGFMQAS 269
ESKYL+GVG++RQR+AIVDGLRDSV FS+ + GT+ KD+MD++L+TQYFD ++++G SS+SS+VF+PH P +V+ + S +RDG +QA+
Sbjct: 34 ESKYLAGVGIARQRQAIVDGLRDSVLAFSENVPGTTAKDIMDMVLVTQYFDTMKEIGASSKSSSVFIPHGPGAVKDVASQIRDGLLQAN 122
BLAST of mRNA_P-canaliculata_contig10073.147.1 vs. uniprot
Match:
A0A8B8LNQ9_ABRPR (hypersensitive-induced response protein-like protein 2 isoform X2 n=3 Tax=fabids TaxID=91835 RepID=A0A8B8LNQ9_ABRPR)
HSP 1 Score: 119 bits (299), Expect = 1.610e-31
Identity = 54/93 (58.06%), Postives = 78/93 (83.87%), Query Frame = 3
Query: 3 ESKYLSGVGVSRQRKAIVDGLRDSVQTFSDTIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRSSTVFLPHAPQSVEALQSAMRDGFMQASAGQV 281
ESKYLSG+G++RQR+AIVDGLRDSV FS+ + GT+ KDVMD++L+TQYFD ++++G SS+SS+VF+PH P +V+ + +RDG +QA+A Q+
Sbjct: 134 ESKYLSGLGIARQRQAIVDGLRDSVLAFSENVPGTTAKDVMDMVLVTQYFDTMKEIGASSKSSSVFIPHGPGAVKDIAVQIRDGLLQANASQI 226
BLAST of mRNA_P-canaliculata_contig10073.147.1 vs. uniprot
Match:
A0A6M2EVY6_9ROSI (Uncharacterized protein n=1 Tax=Populus davidiana TaxID=266767 RepID=A0A6M2EVY6_9ROSI)
HSP 1 Score: 117 bits (292), Expect = 2.670e-31
Identity = 53/89 (59.55%), Postives = 75/89 (84.27%), Query Frame = 3
Query: 3 ESKYLSGVGVSRQRKAIVDGLRDSVQTFSDTIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRSSTVFLPHAPQSVEALQSAMRDGFMQAS 269
ESKYLSG+G++RQR+AIVDGLRDSV FS+ + GTS KDVMD++L+TQYFD ++++G +S+SSTVF+PH P ++ + + +RDG +QAS
Sbjct: 63 ESKYLSGLGIARQRQAIVDGLRDSVLGFSENVPGTSAKDVMDMVLVTQYFDTMKEIGAASKSSTVFIPHGPGAIRDVATQIRDGLLQAS 151
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10073.147.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 3.00e-49 / Id = 84.47 Expect = 8.16e-48 / Id = 82.65 Expect = 1.54e-45 / Id = 82.65 Expect = 6.43e-42 / Id = 77.42 Expect = 8.03e-33 / Id = 65.52 Expect = 6.25e-32 / Id = 58.70 Expect = 1.44e-31 / Id = 64.04 Expect = 1.59e-31 / Id = 58.43 Expect = 1.61e-31 / Id = 58.06 Expect = 2.67e-31 / Id = 59.55 Sequence A0A6H5KBQ9_9PHAE A0A6H5KP74_9PHAE D8LDT1_ECTSI A0A835YL74_9STRA A0A7S4IJZ4_9EUKA A0A816WVN1_BRANA M1D6E3_SOLTU A0A453KP95_AEGTS A0A8B8LNQ9_ABRPR A0A6M2EVY6_9ROSI Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10073.147.1
>prot_P-canaliculata_contig10073.147.1 ID=prot_P-canaliculata_contig10073.147.1|Name=mRNA_P-canaliculata_contig10073.147.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=83bp
MASAIPCRRSLTRSMVLHRRTSWTFSSLRSTSTCSATWASLRDPRRYSCL back to top mRNA from alignment at P-canaliculata_contig10073:8824..11237+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig10073.147.1 ID=mRNA_P-canaliculata_contig10073.147.1|Name=mRNA_P-canaliculata_contig10073.147.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=2414bp|location=Sequence derived from alignment at P-canaliculata_contig10073:8824..11237+ (Pelvetia canaliculata dioecious)CGGAGTCAAAGTACCTCTCCGGCGTGGGTGTCTCGAGGCAGCGTAAGGCG
ATCGTCG ATGGCCTCCGCGATTCCGTGCAGACGTTCTCTGACACGATCGA
TG GTGCGTGGCGTGGCGACAAGTAAAAAGCACCGCAGCAGCATTGCCATT
TCTTGATTTAGCGTTGTCTTTTTGTTTTTGATTTTTCCGCCCGCCACATT
TTATTTATTTTATTTTTGGTTGAATATTGTTTCCGCAACTGCCGGGGGAG
GAAGGAGAAGTGTATTGTAGTCGTCGTAAAGTTTCAGGGGTCGGACTTTG
ACGAATCCAGAATAGCCTACAATCTATTTGTATCTGGATATGGTTTAATT
GTTTAGTTGTTCAACGGCAGTGCTCTGCGTGGGGAAGACGTCTTCAGCCC
AGTAAATTTCCGGAAACGTTAGAAAAGACTACTGTATTTGTAAATATGTA
TTACTTCAACTCCGTACACGTGTTTTTTTACTCTTCGGTGATGTAATCGG
TAGGTTGAAAGGTTGTTCGCGCGTATTAGAGGATGCTGGAAATATCTCAA
CGGGATGCTCGCACTTTTTTGGGTTTAACAAATATGTATAATATCGTAAT
GATAATCGTTTTTCCTGCGTTGATCAGGTACTTCACCGAAGGACGTCATG
GACCTTCTCCTCCTTACGCAG GTGAAATACTATTTAGTATAAAGTATAGA
AACAGTGTGTTTATATTTGGCAAAATAAGTCCCGCCTCTTGTGCCTAAAC
AACAAACAGTATGAAGAAACAAAACAAGACGAAACGAAACGGGTCAGTCA
AAAAGCCTCTGGACCCATCCCATCGAGAACTCGACGTTGTAGGCACCAGA
TCCCTCCTTGTCGAAGAATCAACGAACTTGACCTTTCGACCGTTGTTAGT
TACATCAATTGTTTGGAACTCTCGTTTGAATACTAAATAAAACTACGCTG
AAGTATATTAATTACAGCATAAAATATTGCACTCTTTTTTCTGGGGGGGG
GGGGGGGGATGTTCCCGTAATGATTAGCTTTGTAACCATTGTTCCGATTT
CTCGGGGATTTTTCGTAGCGCTCTCTAANNNNNNNNNNAAAGAAGCACAT
CACTTAACATACGCACAGGCGTATTTCTGGCGGGCTGGGTGGGGGGGGGG
GGGAGGGCGACGATGTATCCGTAATGATTAGCCTTGTAACCATTGTTCCG
ATGTCTCGCGGATCTTTCGTAGCGCTCGCTGACAGTGCTGCTACGGTTAT
TATAATTTATATGAGCCATCAACGGCTTGCTCCTGGTGTGTACCTACTAG
GCTCAAGTTCTGTGTAGGCGTGAAACCAGCACCCATTTGTGACTATCCCC
TCGTCACGCACGCGTAGGCTTGGTGAAAACCGCACAGTTCAAACATTTTA
TAAGCTGAGCGTAACTGTATTAACTGTTTACCCTTGTTTTTGCCGTTTTT
TAATTTACTGTCTTCAACAGTACTTCGACATGCTCCGCGACGTGGGCCAG
TCTTCGAGATCCTCGACGGTATTCCTGCCTCACGCGCCCCAGTCGGTGGA
GGCCTTGCAGTCCGCCATGCGTGATGGCTTTATGCAG GTAGGTGCCTTGA
TGCGAGGCTATGATTCAGAGCGAGTCGTTTTGGCTCCCTTGCGCCGTTGA
GCTAGAGCGCGAGCGTGCTGTCAAAAATCGTTACATATCGTTTTTTTATA
CATAGTGAAGCGATGTGTTGAATCGTTTGGTTGGAGAGGGTTGGAGGACT
GATATATAATCACATATACATGTATAAGAAGCGATCGTTCTATTACTACA
GACGACAACTTATTCACAGGACAACGAGCAAGGGGACGTGTAACTGTTTT
ACTACTATATGACAAAATGCTTTGACGAGGGGTTTGTCTGGAGTATCACA
GGTGTCCGCGTTTTGCCGAGCGAATGTCGTCGTGGAAATTGCCCCGCAGC
GGCGACTTTTGTTTTCGAGTACGTGTTATTATTATGGTACTTGGGTGCCC
CAAACTTTAATAAATAACATGTATTAATAGTAATAATTTCGGAAAGTTTA
CTCACAGTCAGGTCACGATTGACTATTAACAGTCTTCTTGACAAGCTACA
CGATATTGGTGCTCATGTGGTTGTTTTCAACACACGTGGGACTCGAGCGA
TCGCACCCGTCGATGGGTGCGCTGAGGCCGCTTTCGTTAATAACCTCCAA
AGTTTGAGCAATAACAGCCTGTGATATTTCGGGCAAAAACGTTTGCGCTG
CTAACCAGTACCGTACTGAACAACCGCTTCTCTCTCGCCTTCCCCTCTAT
ACCTCGAAACGAACGCTTTCTAACTTTATTTTACGGCTGTTATGTGCAGG
CAAGTGCCGGGCAGGTGGGTGCCCATCAGCCGCAACAGATAA AGCGCTAA
TCCTTCGGCAAGGT back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10073:8824..11237+
>mRNA_P-canaliculata_contig10073.147.1 ID=mRNA_P-canaliculata_contig10073.147.1|Name=mRNA_P-canaliculata_contig10073.147.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=498bp|location=Sequence derived from alignment at P-canaliculata_contig10073:8824..11237+ (Pelvetia canaliculata dioecious) back to top