Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 336 |
| Cds size | 333 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815579.4799304-CDS-P-canaliculata_contig1006:11820..12153 | 1622815579.4799304-CDS-P-canaliculata_contig1006:11820..12153 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig1006 11821..12153 + |
| 1693494148.302391-CDS-P-canaliculata_contig1006:11820..12153 | 1693494148.302391-CDS-P-canaliculata_contig1006:11820..12153 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig1006 11821..12153 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig1006.130.1 >prot_P-canaliculata_contig1006.130.1 ID=prot_P-canaliculata_contig1006.130.1|Name=mRNA_P-canaliculata_contig1006.130.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=111bp
PNTRAPAIVEGGLCFRLFHPIRNLCSCTRPTLSNGTHPPVLERLPKSPNA
PHAHKHTPYSCRSSPFSAASPPWPCPCPARCRTPCVHTSSRLASSPIRPA
RAALNTYGSRH back to topmRNA from alignment at P-canaliculata_contig1006:11821..12155+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig1006.130.1 ID=mRNA_P-canaliculata_contig1006.130.1|Name=mRNA_P-canaliculata_contig1006.130.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=335bp|location=Sequence derived from alignment at P-canaliculata_contig1006:11821..12155+ (Pelvetia canaliculata dioecious)
CCGAACACACGTGCGCCTGCCATCGTTGAAGGCGGCCTTTGCTTCCGCCT
TTTCCACCCCATTAGAAATCTCTGTTCCTGCACCCGCCCGACACTTTCAA
ACGGCACACATCCCCCCGTACTAGAAAGACTCCCCAAGTCACCAAACGCA
CCACACGCACACAAACACACGCCGTACTCATGCAGATCCTCACCATTCTC
TGCGGCCTCGCCGCCTTGGCCCTGCCCGTGTCCAGCCAGGTGCAGGACAC
CATGCGTCCATACCTCCTCAAGACTTGCCTCAAGCCCGATCAGGCCAGCA
AGAGCCGCTTTGAACACCTATGGCTCGCGTCATAC back to topCoding sequence (CDS) from alignment at P-canaliculata_contig1006:11821..12155+ >mRNA_P-canaliculata_contig1006.130.1 ID=mRNA_P-canaliculata_contig1006.130.1|Name=mRNA_P-canaliculata_contig1006.130.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=666bp|location=Sequence derived from alignment at P-canaliculata_contig1006:11821..12155+ (Pelvetia canaliculata dioecious)
CCGAACACACGTGCGCCTGCCATCGTTGAAGGCGGCCTTTGCTTCCGCCT
TTTCCACCCCATTAGAAATCTCTGTTCCTGCACCCGCCCGACACTTTCAA
ACGGCACACATCCCCCCGTACTAGAAAGACTCCCCAAGTCACCAAACGCA
CCACACGCACACAAACACACGCCGTACTCATGCAGATCCTCACCATTCTC
TGCGGCCTCGCCGCCTTGGCCCTGCCCGTGTCCAGCCAGGTGCAGGACAC
CATGCGTCCATACCTCCTCAAGACTTGCCTCAAGCCCGATCAGGCCAGCA
AGAGCCGCTTTGAACACCTATGGCTCGCGTCATCCGAACACACGTGCGCC
TGCCATCGTTGAAGGCGGCCTTTGCTTCCGCCTTTTCCACCCCATTAGAA
ATCTCTGTTCCTGCACCCGCCCGACACTTTCAAACGGCACACATCCCCCC
GTACTAGAAAGACTCCCCAAGTCACCAAACGCACCACACGCACACAAACA
CACGCCGTACTCATGCAGATCCTCACCATTCTCTGCGGCCTCGCCGCCTT
GGCCCTGCCCGTGTCCAGCCAGGTGCAGGACACCATGCGTCCATACCTCC
TCAAGACTTGCCTCAAGCCCGATCAGGCCAGCAAGAGCCGCTTTGAACAC
CTATGGCTCGCGTCAT back to top
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