Homology
BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Match:
A0A150V1F1_9PEZI (Thioredoxin domain-containing protein n=1 Tax=Acidomyces richmondensis BFW TaxID=766039 RepID=A0A150V1F1_9PEZI)
HSP 1 Score: 192 bits (488), Expect = 1.790e-58
Identity = 90/112 (80.36%), Postives = 102/112 (91.07%), Query Frame = 1
Query: 286 RLFSVAMAKEGVHNLQSKADFDSAMKEQGLIVLDCFATWCGPCKVIAPQVVKFSSQFPDAHFYKLDVDEVPEVAQELNVRAMPTFLLFKDGEKVEEVVGANPTALETAIKKH 621
R FS M+K+GVHNLQ+KA+FD+A+KE GL+VLDCFATWCGPCKVIAPQVVKFS +P+A FYKLDVD+VP+VAQEL +RAMPTFLLFKDGEKV EVVGANPTALE AIKKH
Sbjct: 40 RQFSATMSKQGVHNLQNKAEFDAALKEPGLMVLDCFATWCGPCKVIAPQVVKFSDLYPNARFYKLDVDDVPDVAQELGIRAMPTFLLFKDGEKVGEVVGANPTALEGAIKKH 151
BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Match:
A0A1V8U4R0_9PEZI (Thioredoxin n=2 Tax=Rachicladosporium sp. CCFEE 5018 TaxID=1974281 RepID=A0A1V8U4R0_9PEZI)
HSP 1 Score: 186 bits (473), Expect = 4.570e-56
Identity = 87/112 (77.68%), Postives = 99/112 (88.39%), Query Frame = 1
Query: 286 RLFSVAMAKEGVHNLQSKADFDSAMKEQGLIVLDCFATWCGPCKVIAPQVVKFSSQFPDAHFYKLDVDEVPEVAQELNVRAMPTFLLFKDGEKVEEVVGANPTALETAIKKH 621
R FS M KEGVHNL SKADFDSA+ E GL+VLDCFATWCGPCKVIAPQVVKFS+ + D FYKLDVDE+P+VAQEL+VRAMPTF++FKDG+KV EVVGANPTALE AIK++
Sbjct: 48 RFFSATMGKEGVHNLGSKADFDSALSEPGLMVLDCFATWCGPCKVIAPQVVKFSNTYTDTRFYKLDVDEIPDVAQELSVRAMPTFIIFKDGQKVGEVVGANPTALEAAIKQN 159
BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Match:
A0A1V8TDX6_9PEZI (Thioredoxin n=2 Tax=Rachicladosporium antarcticum TaxID=1507870 RepID=A0A1V8TDX6_9PEZI)
HSP 1 Score: 181 bits (458), Expect = 1.550e-54
Identity = 84/106 (79.25%), Postives = 96/106 (90.57%), Query Frame = 1
Query: 304 MAKEGVHNLQSKADFDSAMKEQGLIVLDCFATWCGPCKVIAPQVVKFSSQFPDAHFYKLDVDEVPEVAQELNVRAMPTFLLFKDGEKVEEVVGANPTALETAIKKH 621
M KEGVHNL SKADFDSA+ E GL+VLDCFATWCGPCKVIAPQVVKFS+ + D FYKLDVDE+P+VAQEL+VRAMPTF++FKDG+KV EVVGANPTALE AIK++
Sbjct: 1 MGKEGVHNLASKADFDSALGEPGLMVLDCFATWCGPCKVIAPQVVKFSNTYTDTRFYKLDVDEIPDVAQELSVRAMPTFIIFKDGQKVGEVVGANPTALEAAIKQN 106
BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Match:
A0A1Y2A7I8_9PLEO (Thioredoxin n=1 Tax=Clohesyomyces aquaticus TaxID=1231657 RepID=A0A1Y2A7I8_9PLEO)
HSP 1 Score: 180 bits (457), Expect = 2.830e-54
Identity = 87/107 (81.31%), Postives = 93/107 (86.92%), Query Frame = 1
Query: 304 MAKEGVHNLQSKADFDSAMKEQG-LIVLDCFATWCGPCKVIAPQVVKFSSQFPDAHFYKLDVDEVPEVAQELNVRAMPTFLLFKDGEKVEEVVGANPTALETAIKKH 621
M KEGVHNL KA+FD A+K +G LIVLDCFATWCGPCKVIAPQVVKFS +P A FYKLDVDEVP+VAQEL +RAMPTFLLFKDGEKV EVVGANP ALE AIKKH
Sbjct: 1 MGKEGVHNLSKKAEFDEALKVKGQLIVLDCFATWCGPCKVIAPQVVKFSDTYPTARFYKLDVDEVPDVAQELGIRAMPTFLLFKDGEKVSEVVGANPKALEAAIKKH 107
BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Match:
A0A2K1QTB8_9PEZI (Thioredoxin n=1 Tax=Sphaceloma murrayae TaxID=2082308 RepID=A0A2K1QTB8_9PEZI)
HSP 1 Score: 179 bits (453), Expect = 8.560e-54
Identity = 85/107 (79.44%), Postives = 97/107 (90.65%), Query Frame = 1
Query: 304 MAKEGVHNLQSKADFDSAMKE-QGLIVLDCFATWCGPCKVIAPQVVKFSSQFPDAHFYKLDVDEVPEVAQELNVRAMPTFLLFKDGEKVEEVVGANPTALETAIKKH 621
MAK+GVHNLQ+KA+FD AM++ + L+VLDCFATWCGPCKVIAPQVVKFS +P+A FYKLDVDEVP+VAQEL +RAMPTFLLFK GEKVEEVVGANP ALE AI+KH
Sbjct: 1 MAKQGVHNLQAKAEFDKAMEDKETLMVLDCFATWCGPCKVIAPQVVKFSDTYPNARFYKLDVDEVPDVAQELGIRAMPTFLLFKGGEKVEEVVGANPKALEAAIQKH 107
BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Match:
A0A6G1HC32_9PEZI (Thioredoxin-domain-containing protein n=1 Tax=Aulographum hederae CBS 113979 TaxID=1176131 RepID=A0A6G1HC32_9PEZI)
HSP 1 Score: 178 bits (451), Expect = 8.720e-53
Identity = 82/112 (73.21%), Postives = 95/112 (84.82%), Query Frame = 1
Query: 286 RLFSVAMAKEGVHNLQSKADFDSAMKEQGLIVLDCFATWCGPCKVIAPQVVKFSSQFPDAHFYKLDVDEVPEVAQELNVRAMPTFLLFKDGEKVEEVVGANPTALETAIKKH 621
+ F MA+EGVHNL SKADFD A+ E+G++VLDCFATWCGPCK IAPQVVK+S +P A FYKLDVDEVP+VAQEL +RAMPTF++FKDGEK +EVVGANP ALE AIK H
Sbjct: 41 KYFYSTMAEEGVHNLMSKADFDKALGEKGVMVLDCFATWCGPCKTIAPQVVKYSKAYPSARFYKLDVDEVPDVAQELGIRAMPTFIVFKDGEKSKEVVGANPKALEAAIKDH 152
BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Match:
A0A6A6BJH5_9PEZI (Thioredoxin domain-containing protein n=1 Tax=Aplosporella prunicola CBS 121167 TaxID=1176127 RepID=A0A6A6BJH5_9PEZI)
HSP 1 Score: 176 bits (447), Expect = 3.180e-52
Identity = 82/112 (73.21%), Postives = 96/112 (85.71%), Query Frame = 1
Query: 286 RLFSVAMAKEGVHNLQSKADFDSAMKEQGLIVLDCFATWCGPCKVIAPQVVKFSSQFPDAHFYKLDVDEVPEVAQELNVRAMPTFLLFKDGEKVEEVVGANPTALETAIKKH 621
R F+ ++ K GVHNLQ+K ++D+A+KE L+VLDCFATWCGPCKVIAPQVVKFS +P A FYKLDVDE+P+VAQEL +RAMPTFLLFK GEKV EVVGANP ALE AIK+H
Sbjct: 40 RTFTTSIRKMGVHNLQTKTEWDNALKEPELVVLDCFATWCGPCKVIAPQVVKFSEAYPTAKFYKLDVDEIPDVAQELGIRAMPTFLLFKGGEKVGEVVGANPKALEAAIKQH 151
BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Match:
A0A1J9RG75_9PEZI (Thioredoxin n=1 Tax=Diplodia corticola TaxID=236234 RepID=A0A1J9RG75_9PEZI)
HSP 1 Score: 176 bits (447), Expect = 3.620e-52
Identity = 91/139 (65.47%), Postives = 107/139 (76.98%), Query Frame = 1
Query: 226 RLAASSSIPTTRSTFSVTPI-------RLFSVAMAKEGVHNLQSKADFDSAMKEQGLIVLDCFATWCGPCKVIAPQVVKFSSQFPDAHFYKLDVDEVPEVAQELNVRAMPTFLLFKDGEKVEEVVGANPTALETAIKKH 621
RL A S S FSVT + RLF + ++ GVHNL +K ++DSA++E L+VLDCFATWCGPCKVIAPQ+VKFS FP+A FYKLDVDEVP+VAQEL +RAMPTFLLFK GEKV EVVGANP ALETAI++H
Sbjct: 18 RLRAPVSTAARPSPFSVTRVQPSIRSTRLFQSSASRMGVHNLANKTEWDSALQEPELVVLDCFATWCGPCKVIAPQLVKFSEAFPNAKFYKLDVDEVPDVAQELGIRAMPTFLLFKGGEKVGEVVGANPKALETAIRQH 156
BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Match:
R7YGT3_CONA1 (Thioredoxin n=1 Tax=Coniosporium apollinis (strain CBS 100218) TaxID=1168221 RepID=R7YGT3_CONA1)
HSP 1 Score: 174 bits (442), Expect = 4.190e-52
Identity = 84/107 (78.50%), Postives = 94/107 (87.85%), Query Frame = 1
Query: 304 MAKEGVHNLQSKADFDSAMKEQG-LIVLDCFATWCGPCKVIAPQVVKFSSQFPDAHFYKLDVDEVPEVAQELNVRAMPTFLLFKDGEKVEEVVGANPTALETAIKKH 621
M K+GVHNLQ+KA+FD AM ++ L+VLDCFATWCGPCKVIAPQVVKFS +PDA FYKLDVDEVPEVAQEL +RAMPTFLLFK+GEKV EVVGANP ALE AIK +
Sbjct: 1 MGKQGVHNLQTKAEFDQAMTDKDTLMVLDCFATWCGPCKVIAPQVVKFSDAYPDARFYKLDVDEVPEVAQELGIRAMPTFLLFKNGEKVGEVVGANPKALEAAIKSN 107
BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Match:
A0A6A6ADD9_9PLEO (Thioredoxin n=1 Tax=Dothidotthia symphoricarpi CBS 119687 TaxID=1392245 RepID=A0A6A6ADD9_9PLEO)
HSP 1 Score: 174 bits (441), Expect = 5.760e-52
Identity = 78/106 (73.58%), Postives = 96/106 (90.57%), Query Frame = 1
Query: 304 MAKEGVHNLQSKADFDSAMKEQGLIVLDCFATWCGPCKVIAPQVVKFSSQFPDAHFYKLDVDEVPEVAQELNVRAMPTFLLFKDGEKVEEVVGANPTALETAIKKH 621
M EGVHNLQ+K+ FD+A++E+GL+++DCFATWCGPCKVIAP +VK++S F +A FYKLDVDEVP+VAQEL +RAMPTFLLFKDG +V+EVVGANP+ALE AIKKH
Sbjct: 1 MGHEGVHNLQTKSAFDAALEEKGLLIVDCFATWCGPCKVIAPVIVKYASAFSNARFYKLDVDEVPDVAQELGIRAMPTFLLFKDGVRVQEVVGANPSALEAAIKKH 106
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig1006.125.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.79e-58 / Id = 80.36 Expect = 4.57e-56 / Id = 77.68 Expect = 1.55e-54 / Id = 79.25 Expect = 2.83e-54 / Id = 81.31 Expect = 8.56e-54 / Id = 79.44 Expect = 8.72e-53 / Id = 73.21 Expect = 3.18e-52 / Id = 73.21 Expect = 3.62e-52 / Id = 65.47 Expect = 4.19e-52 / Id = 78.50 Expect = 5.76e-52 / Id = 73.58 Sequence A0A150V1F1_9PEZI A0A1V8U4R0_9PEZI A0A1V8TDX6_9PEZI A0A1Y2A7I8_9PLEO A0A2K1QTB8_9PEZI A0A6G1HC32_9PEZI A0A6A6BJH5_9PEZI A0A1J9RG75_9PEZI R7YGT3_CONA1 A0A6A6ADD9_9PLEO Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Fungi Seed ortholog score 176.0 Seed ortholog evalue 1.4e-41 Seed eggNOG ortholog 310453.XP_007585614.1 Preferred name TRX1 KEGG ko ko:K03671 KEGG Pathway ko04621,ko05418,map04621,map05418 GOs GO:0000011,GO:0000096,GO:0000097,GO:0000103,GO:0000302,GO:0000322,GO:0000323,GO:0000324,GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005773,GO:0005829,GO:0006082,GO:0006464,GO:0006518,GO:0006520,GO:0006555,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0006810,GO:0006888,GO:0006890,GO:0006950,GO:0006979,GO:0006996,GO:0007033,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009636,GO:0009987,GO:0010035,GO:0015035,GO:0015036,GO:0016043,GO:0016053,GO:0016192,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0016999,GO:0017001,GO:0017144,GO:0019379,GO:0019419,GO:0019538,GO:0019725,GO:0019752,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0033554,GO:0034599,GO:0034614,GO:0034641,GO:0035690,GO:0036211,GO:0042144,GO:0042221,GO:0042493,GO:0042542,GO:0042592,GO:0042737,GO:0042743,GO:0042744,GO:0043094,GO:0043102,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045454,GO:0046394,GO:0046677,GO:0046907,GO:0047134,GO:0048193,GO:0048284,GO:0048308,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051186,GO:0051187,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0055114,GO:0061024,GO:0061025,GO:0061687,GO:0061691,GO:0061692,GO:0065007,GO:0065008,GO:0070013,GO:0070301,GO:0070887,GO:0071236,GO:0071265,GO:0071267,GO:0071704,GO:0071840,GO:0072593,GO:0080058,GO:0080134,GO:0080135,GO:0097237,GO:0097576,GO:0098754,GO:0098869,GO:1900407,GO:1900409,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901700,GO:1901701,GO:1902882,GO:1902884,GO:1990355,GO:1990748 EggNOG free text desc. Belongs to the thioredoxin family EggNOG OGs 20270@147541,3A886@33154,3P5A0@4751,3QX8W@4890,COG0526@1,KOG0907@2759 COG Functional cat. O Best tax level Dothideomycetes Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko03110 Hectar predicted targeting category mitochondrion Ec32 ortholog description Thioredoxin-like fold Ec32 ortholog Ec-26_002850.1 Exons 2 Model size 821 Cds size 501 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815579.5314848-UTR-P-canaliculata_contig1006:864..990 1622815579.5314848-UTR-P-canaliculata_contig1006:864..990 Pelvetia canaliculata dioecious UTR P-canaliculata_contig1006 865..990 + 1693494148.3106806-UTR-P-canaliculata_contig1006:864..990 1693494148.3106806-UTR-P-canaliculata_contig1006:864..990 Pelvetia canaliculata dioecious UTR P-canaliculata_contig1006 865..990 + 1622815579.5790014-UTR-P-canaliculata_contig1006:1568..1762 1622815579.5790014-UTR-P-canaliculata_contig1006:1568..1762 Pelvetia canaliculata dioecious UTR P-canaliculata_contig1006 1569..1762 + 1693494148.344355-UTR-P-canaliculata_contig1006:1568..1762 1693494148.344355-UTR-P-canaliculata_contig1006:1568..1762 Pelvetia canaliculata dioecious UTR P-canaliculata_contig1006 1569..1762 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815579.5457938-CDS-P-canaliculata_contig1006:990..1304 1622815579.5457938-CDS-P-canaliculata_contig1006:990..1304 Pelvetia canaliculata dioecious CDS P-canaliculata_contig1006 991..1304 + 1693494148.3231094-CDS-P-canaliculata_contig1006:990..1304 1693494148.3231094-CDS-P-canaliculata_contig1006:990..1304 Pelvetia canaliculata dioecious CDS P-canaliculata_contig1006 991..1304 + 1622815579.5608184-CDS-P-canaliculata_contig1006:1381..1568 1622815579.5608184-CDS-P-canaliculata_contig1006:1381..1568 Pelvetia canaliculata dioecious CDS P-canaliculata_contig1006 1382..1568 + 1693494148.3321395-CDS-P-canaliculata_contig1006:1381..1568 1693494148.3321395-CDS-P-canaliculata_contig1006:1381..1568 Pelvetia canaliculata dioecious CDS P-canaliculata_contig1006 1382..1568 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig1006.125.1
>prot_P-canaliculata_contig1006.125.1 ID=prot_P-canaliculata_contig1006.125.1|Name=mRNA_P-canaliculata_contig1006.125.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=167bp
MSRFIRTSTSRTLLTTTLCRTIHSPTAATNPSRRLAASSSIPTTRSTFSV back to top mRNA from alignment at P-canaliculata_contig1006:865..1762+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig1006.125.1 ID=mRNA_P-canaliculata_contig1006.125.1|Name=mRNA_P-canaliculata_contig1006.125.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=898bp|location=Sequence derived from alignment at P-canaliculata_contig1006:865..1762+ (Pelvetia canaliculata dioecious)GTCGACGACACTGCGTCTGGCTGGTACGGAATTGCACAGCCCCCACCAAA
CTAGACCTTTGGAAACATCCGCCAGAGCTCTCAGTGACCGAGAGCTCCGA
GGTATAAAGGAAGGAGGGCGCCCCTC ATGTCTCGCTTCATCCGCACCTCT
ACGTCACGAACACTCCTCACGACAACTCTTTGCAGAACAATCCACTCCCC
AACAGCAGCAACCAACCCTTCGCGACGACTCGCCGCATCTTCTTCCATCC
CGACCACCCGTTCAACCTTCTCCGTCACCCCCATACGTCTCTTCTCTGTC
GCCATGGCCAAAGAGGGAGTCCACAATCTCCAGTCCAAAGCCGACTTTGA
CTCGGCCATGAAGGAGCAGGGCCTCATCGTCCTCGACTGCTTCGCCACCT
GGTGTGGGCCGTGCAAAGTCATCGCCCCGCAAGTCGTCAA GTACGAGCAG
TCCCTCCCTTCGCGCCTCCATCACCTGGTTGCCTCGTGCAGCGCGCTGAC
TTGCCGTGGTACACCAGGTTCTCCAGCCAGTTCCCCGACGCTCACTTCTA
CAAACTCGACGTGGACGAGGTGCCCGAAGTCGCCCAGGAGCTGAATGTGC
GTGCCATGCCGACGTTTCTGCTGTTCAAGGATGGCGAGAAAGTGGAGGAG
GTCGTGGGCGCCAACCCCACGGCTTTGGAGACGGCAATCAAGAAACATTC
GTAG TCCAATGACACCATCGGGTACTGCAGCGGCAGATCAGATGATTGAC
GGCCGTCTTTGCGAGAGGGAGAAGAGCTACTATATCAGACTGTTCGCGCA
ATGCATTGCCGTCAGTCGTGATGTTGCAGATACGGCCTATGTCCAAGTAG
GTACTTAGCCATCTTTATCTCAACCCCGTAGCGAGCATGAGAGCCCTG back to top Coding sequence (CDS) from alignment at P-canaliculata_contig1006:865..1762+
>mRNA_P-canaliculata_contig1006.125.1 ID=mRNA_P-canaliculata_contig1006.125.1|Name=mRNA_P-canaliculata_contig1006.125.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1002bp|location=Sequence derived from alignment at P-canaliculata_contig1006:865..1762+ (Pelvetia canaliculata dioecious) back to top