Homology
BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Match:
A0A848V1M7_9PROT (GFA family protein n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V1M7_9PROT)
HSP 1 Score: 217 bits (553), Expect = 1.110e-70
Identity = 97/134 (72.39%), Postives = 114/134 (85.07%), Query Frame = 1
Query: 1 MPKLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDEDIKIKGETKRFEHTVDSGNALTKDFCPTCGSQMFGGNVGRPGMTAVKAGVINEKDEIKPQFNVYVSSKVPCTLLDENIPAFDKMP 402
M LTGNCLCGQVSF A+GDI M GNCHCTDCQQI+G+ FATL+F+ + ++KI GETKRFEHTVDSGNALTKDFCP CGSQMFGGNV RPG A++ G INEK+ + PQFNV+ SSK PC++LDE+IP F+KMP
Sbjct: 1 MTILTGNCLCGQVSFEADGDITMMGNCHCTDCQQITGAGFATLVFMNENNVKISGETKRFEHTVDSGNALTKDFCPNCGSQMFGGNVLRPGSIALRLGSINEKEHVNPQFNVFCSSKAPCSILDESIPGFEKMP 134
BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Match:
UPI000426690E (GFA family protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI000426690E)
HSP 1 Score: 211 bits (537), Expect = 2.270e-68
Identity = 94/135 (69.63%), Postives = 113/135 (83.70%), Query Frame = 1
Query: 1 MPKLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDEDIKIKGETKRFEHTVDSGNALTKDFCPTCGSQMFGGNVGRPGMTAVKAGVINEKDEIKPQFNVYVSSKVPCTLLDENIPAFDKMPG 405
MPKLTGNCLCG V F A+GDI MQGNCHCTDCQQ+SGSPFATL+F++ +++++ GE K F HTVDSGN LTK+FC CGSQMF GRPGM ++AG INEK+ I+PQFNVY SK+PCTL+D++IPAFDKMPG
Sbjct: 1 MPKLTGNCLCGAVRFEADGDIAMQGNCHCTDCQQVSGSPFATLVFMESDNVEVTGELKSFSHTVDSGNQLTKEFCTHCGSQMFA--KGRPGMIGLRAGSINEKEHIQPQFNVYAGSKLPCTLMDDDIPAFDKMPG 133
BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Match:
UPI0016733560 (GFA family protein n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI0016733560)
HSP 1 Score: 193 bits (491), Expect = 2.470e-61
Identity = 87/135 (64.44%), Postives = 100/135 (74.07%), Query Frame = 1
Query: 1 MPKLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDEDIKIKGETKRFEHTVDSGNALTKDFCPTCGSQMFGGNVGRPGMTAVKAGVINEKDEIKPQFNVYVSSKVPCTLLDENIPAFDKMPG 405
M KLTGNCLCG V+FVA+GDI MQGNCHCTDC+Q G FATL+F+K D+ I GE K F H VDSG+ LTK FCP CGSQ+F N RP ++AG +NE E+KPQFNVY SK+ CT LD NIPAFD MPG
Sbjct: 1 MTKLTGNCLCGDVTFVADGDITMQGNCHCTDCRQSGGGAFATLVFMKVADVDISGEVKTFNHVVDSGSTLTKTFCPRCGSQLFTSNQARPESIGIRAGTLNEHQEVKPQFNVYAKSKMDCTHLDPNIPAFDGMPG 135
BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Match:
A0A1I4DQ37_9RHOB (Uncharacterized conserved protein n=1 Tax=Shimia haliotis TaxID=1280847 RepID=A0A1I4DQ37_9RHOB)
HSP 1 Score: 176 bits (446), Expect = 1.760e-54
Identity = 78/135 (57.78%), Postives = 100/135 (74.07%), Query Frame = 1
Query: 1 MPKLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDEDIKIKGETKRFEHTVDSGNALTKDFCPTCGSQMFGGNVGRPGMTAVKAGVINEKDEIKPQFNVYVSSKVPCTLLDENIPAFDKMPG 405
MPKLTG CLCG++SF A+GD+ + NCHCT C+Q +GS FATL+F+K +DIKI G K FEH D+G+ +TK FC TCG+ +F N R GM ++AGVINE E P+ NVYVSSK+ T+L + IPAF+KMPG
Sbjct: 1 MPKLTGQCLCGEISFEADGDVPVMANCHCTACRQSTGSAFATLMFMKRDDIKITGTPKTFEHASDAGSTMTKHFCSTCGTPLFTQNSSREGMLGIRAGVINEPQEFTPKANVYVSSKMDATILQDGIPAFEKMPG 135
BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Match:
A0A1M6M3K2_9RHOB (Uncharacterized conserved protein n=2 Tax=Shimia gijangensis TaxID=1470563 RepID=A0A1M6M3K2_9RHOB)
HSP 1 Score: 170 bits (431), Expect = 1.080e-51
Identity = 74/135 (54.81%), Postives = 99/135 (73.33%), Query Frame = 1
Query: 1 MPKLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDEDIKIKGETKRFEHTVDSGNALTKDFCPTCGSQMFGGNVGRPGMTAVKAGVINEKDEIKPQFNVYVSSKVPCTLLDENIPAFDKMPG 405
M KLTG CLCG +SF A+G++ + NCHCT C+Q +G+ FATL+F+K +D+KI G K F+H D+G+ +TK FC CG+ MF N R GM ++AGVINE +E P+ NVYVSSK+ T+LD+ IPAF+KMPG
Sbjct: 38 MTKLTGQCLCGDISFEADGEVPVMANCHCTHCRQSTGAAFATLMFMKQDDVKITGTPKTFQHKSDAGSTMTKHFCGNCGTPMFTQNSSREGMLGLRAGVINEHEEFTPKVNVYVSSKMKATILDDGIPAFEKMPG 172
BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Match:
UPI001CBDC56D (GFA family protein n=1 Tax=Tateyamaria pelophila TaxID=328415 RepID=UPI001CBDC56D)
HSP 1 Score: 169 bits (427), Expect = 1.370e-51
Identity = 74/135 (54.81%), Postives = 98/135 (72.59%), Query Frame = 1
Query: 1 MPKLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDEDIKIKGETKRFEHTVDSGNALTKDFCPTCGSQMFGGNVGRPGMTAVKAGVINEKDEIKPQFNVYVSSKVPCTLLDENIPAFDKMPG 405
M KLTG CLCG++SF A+GD+ + NCHCT C+Q +GS +ATL+F+K D+KI G K ++H D+GN +TK FC TCG+ +F N R GM ++AGVINE E P+ NVY SSK+ T+LD+ IPAF+KMPG
Sbjct: 1 MTKLTGKCLCGEISFEADGDVPVMANCHCTACRQSTGSAYATLMFMKQGDVKITGTPKTYQHKSDAGNTMTKHFCGTCGTPLFTQNSAREGMLGLRAGVINEDAEFAPKVNVYTSSKMKATVLDDGIPAFEKMPG 135
BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Match:
A0A0M9EKH1_9RHOB (Putative glutathione-dependent formaldehyde-activating enzyme n=1 Tax=Shimia sp. SK013 TaxID=1389006 RepID=A0A0M9EKH1_9RHOB)
HSP 1 Score: 168 bits (425), Expect = 2.760e-51
Identity = 72/135 (53.33%), Postives = 98/135 (72.59%), Query Frame = 1
Query: 1 MPKLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDEDIKIKGETKRFEHTVDSGNALTKDFCPTCGSQMFGGNVGRPGMTAVKAGVINEKDEIKPQFNVYVSSKVPCTLLDENIPAFDKMPG 405
M KLTG CLCG++SF A+GD+ + NCHCT C+Q +GS FATL+F+K D+ + G K ++H+ D+GN +TK FC TCG+ MF N R GM ++AG+INE E P+ NVY SSK+ T+LD+ +PAF+KMPG
Sbjct: 1 MTKLTGQCLCGEISFDADGDVPVMANCHCTACRQSTGSAFATLMFMKQTDVNVTGTPKTYQHSSDTGNTMTKSFCGTCGTPMFTQNSAREGMLGLRAGLINEHQEFTPKVNVYTSSKMQATVLDDALPAFEKMPG 135
BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Match:
A0A0P1I5G9_9RHOB (Glutathione-dependent formaldehyde-activating enzyme n=2 Tax=Shimia thalassica TaxID=1715693 RepID=A0A0P1I5G9_9RHOB)
HSP 1 Score: 167 bits (422), Expect = 7.900e-51
Identity = 74/135 (54.81%), Postives = 100/135 (74.07%), Query Frame = 1
Query: 1 MPKLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDEDIKIKGETKRFEHTVDSGNALTKDFCPTCGSQMFGGNVGRPGMTAVKAGVINEKDEIKPQFNVYVSSKVPCTLLDENIPAFDKMPG 405
M KLTG CLCG VSF A+G++ + NCHCT C+Q +GS FATL+F+K+ D+KI G K F+H D+G+ +TK FC CG+ +F N R GM ++AGVI+E++E P+ NVYVSSK+ TLLD+ +PAF+KMPG
Sbjct: 1 MTKLTGECLCGAVSFEADGEVPVMANCHCTACRQSTGSAFATLMFMKEGDVKITGTPKTFQHNSDAGSVMTKHFCDKCGTPLFTQNSTREGMLGLRAGVIHEQEEFAPKVNVYVSSKMKATLLDDALPAFEKMPG 135
BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Match:
UPI0018D6A266 (GFA family protein n=2 Tax=Thiosulfatihalobacter marinus TaxID=2792481 RepID=UPI0018D6A266)
HSP 1 Score: 166 bits (421), Expect = 5.700e-50
Identity = 72/133 (54.14%), Postives = 98/133 (73.68%), Query Frame = 1
Query: 7 KLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDEDIKIKGETKRFEHTVDSGNALTKDFCPTCGSQMFGGNVGRPGMTAVKAGVINEKDEIKPQFNVYVSSKVPCTLLDENIPAFDKMPG 405
+LTG CLCG++SF A+GD+ + NCHCT C+ +GS FATL+F+K+ D+KI G K F+H D+G +TK FC TCG+ MF N R GM ++AG +NE +E P+ NVYVSS++ TLLD++IPAF+KMPG
Sbjct: 55 RLTGQCLCGEISFEADGDVPVMANCHCTACRHSTGSAFATLMFMKEGDVKITGTPKTFQHKSDAGTTMTKHFCDTCGTPMFTQNSAREGMLGLRAGNVNEHEEFTPKANVYVSSRMKATLLDDSIPAFEKMPG 187
BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Match:
A0A345QPE6_9RHOB (Aldehyde-activating protein n=2 Tax=Sulfitobacter sp. SK012 TaxID=1389005 RepID=A0A345QPE6_9RHOB)
HSP 1 Score: 164 bits (416), Expect = 8.590e-50
Identity = 68/135 (50.37%), Postives = 100/135 (74.07%), Query Frame = 1
Query: 1 MPKLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDEDIKIKGETKRFEHTVDSGNALTKDFCPTCGSQMFGGNVGRPGMTAVKAGVINEKDEIKPQFNVYVSSKVPCTLLDENIPAFDKMPG 405
M KLTGNCLCG +SF A+G++ + NCHCT C+Q +GS +ATL+F+K +D+K+ G K ++H+ D+G +TK FC CG+ +F N R GM ++AG+INE++E P+ NVY SSK+ T+L++ +PAF+KMPG
Sbjct: 10 MTKLTGNCLCGDISFEADGEVPVMANCHCTACRQSTGSAYATLMFMKHDDVKVTGTPKTYQHSSDAGTVMTKHFCGNCGTPLFTQNSAREGMLGLRAGLINEQEEFAPKVNVYTSSKLNATVLEDGLPAFEKMPG 144
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100563.121.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.11e-70 / Id = 72.39 Expect = 2.27e-68 / Id = 69.63 Expect = 2.47e-61 / Id = 64.44 Expect = 1.76e-54 / Id = 57.78 Expect = 1.08e-51 / Id = 54.81 Expect = 1.37e-51 / Id = 54.81 Expect = 2.76e-51 / Id = 53.33 Expect = 7.90e-51 / Id = 54.81 Expect = 5.70e-50 / Id = 54.14 Expect = 8.59e-50 / Id = 50.37 Sequence A0A848V1M7_9PROT UPI000426690E UPI0016733560 A0A1I4DQ37_9RHOB A0A1M6M3K2_9RHOB UPI001CBDC56D A0A0M9EKH1_9RHOB A0A0P1I5G9_9RHOB UPI0018D6A266 A0A345QPE6_9RHOB Pages
back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig100563.121.1
>prot_P-canaliculata_contig100563.121.1 ID=prot_P-canaliculata_contig100563.121.1|Name=mRNA_P-canaliculata_contig100563.121.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=136bp
MPKLTGNCLCGQVSFVANGDIQMQGNCHCTDCQQISGSPFATLLFVKDED back to top mRNA from alignment at P-canaliculata_contig100563:250..657+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig100563.121.1 ID=mRNA_P-canaliculata_contig100563.121.1|Name=mRNA_P-canaliculata_contig100563.121.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=408bp|location=Sequence derived from alignment at P-canaliculata_contig100563:250..657+ (Pelvetia canaliculata dioecious)ATGCCAAAACTCACCGGGAATTGCCTTTGCGGCCAAGTCAGCTTTGTAGC
CAATGGAGATATTCAAATGCAGGGCAATTGCCATTGCACGGATTGCCAAC
AGATCTCCGGCTCGCCCTTTGCCACGCTCCTGTTCGTGAAAGACGAAGAC
ATTAAAATCAAAGGCGAGACGAAACGGTTTGAACACACTGTCGACAGCGG
CAATGCGCTCACAAAAGATTTCTGCCCAACCTGCGGCTCGCAAATGTTTG
GCGGCAATGTCGGCCGCCCGGGCATGACCGCCGTTAAAGCCGGCGTCATC
AACGAAAAAGACGAGATTAAGCCGCAGTTTAATGTCTATGTCAGCTCCAA
AGTGCCCTGCACCTTACTCGACGAGAATATCCCGGCCTTCGACAAAATGC
CGGGATAG back to top Coding sequence (CDS) from alignment at P-canaliculata_contig100563:250..657+
>mRNA_P-canaliculata_contig100563.121.1 ID=mRNA_P-canaliculata_contig100563.121.1|Name=mRNA_P-canaliculata_contig100563.121.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=816bp|location=Sequence derived from alignment at P-canaliculata_contig100563:250..657+ (Pelvetia canaliculata dioecious) back to top