Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 588 |
| Cds size | 432 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815577.368519-UTR-P-canaliculata_contig100396:1..74 | 1622815577.368519-UTR-P-canaliculata_contig100396:1..74 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig100396 2..74 + |
| 1693494147.0602007-UTR-P-canaliculata_contig100396:1..74 | 1693494147.0602007-UTR-P-canaliculata_contig100396:1..74 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig100396 2..74 + |
| 1622815577.3917415-UTR-P-canaliculata_contig100396:506..589 | 1622815577.3917415-UTR-P-canaliculata_contig100396:506..589 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig100396 507..589 + |
| 1693494147.0813375-UTR-P-canaliculata_contig100396:506..589 | 1693494147.0813375-UTR-P-canaliculata_contig100396:506..589 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig100396 507..589 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815577.3808954-CDS-P-canaliculata_contig100396:74..506 | 1622815577.3808954-CDS-P-canaliculata_contig100396:74..506 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100396 75..506 + |
| 1693494147.0707028-CDS-P-canaliculata_contig100396:74..506 | 1693494147.0707028-CDS-P-canaliculata_contig100396:74..506 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100396 75..506 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig100396.100.1 >prot_P-canaliculata_contig100396.100.1 ID=prot_P-canaliculata_contig100396.100.1|Name=mRNA_P-canaliculata_contig100396.100.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=144bp
MLYITPLAISRVNIALDDWDAGYQSGSCSDESSVDTEVEDTEPAPRRSSS
VVQDVEVTDVTPAPTRSAGAAGAAGAAGATGAAGATGAADAAGAAAAKAR
QPTIARFFTSKEAPTPQQPRAKEKRAEQRQRDVAAALANPTAP* back to topmRNA from alignment at P-canaliculata_contig100396:2..589+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig100396.100.1 ID=mRNA_P-canaliculata_contig100396.100.1|Name=mRNA_P-canaliculata_contig100396.100.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=588bp|location=Sequence derived from alignment at P-canaliculata_contig100396:2..589+ (Pelvetia canaliculata dioecious)
GCCTGCTCCACCTAAGCCCAGCACATCATCACCTCTCCCGTGTGAGACCC
AGCCTAGCCAGAGACATTCCATTATGCTGTATATCACACCTTTGGCAATA
TCAAGGGTCAATATTGCTTTGGATGATTGGGATGCCGGATACCAGTCTGG
CTCGTGCTCCGATGAGTCTTCTGTTGATACTGAGGTTGAGGACACCGAGC
CAGCACCAAGACGATCATCTTCTGTTGTTCAGGACGTAGAAGTCACAGAC
GTCACCCCGGCACCAACACGCTCAGCTGGTGCTGCTGGTGCTGCTGGTGC
TGCTGGTGCTACTGGTGCTGCTGGTGCTACTGGTGCTGCTGATGCTGCTG
GGGCTGCAGCAGCGAAGGCCCGTCAACCAACTATAGCGAGATTCTTCACT
TCAAAGGAAGCTCCCACCCCTCAGCAGCCGCGGGCGAAGGAGAAGAGAGC
GGAACAGCGGCAGAGAGATGTGGCTGCTGCTCTTGCCAACCCCACCGCGC
CATAGACAAGGTCAGGGTTGTGCGAAGCCACGCGAATGTGAGAGCTGCAC
GGCACCGCGCCGCCGAAGAGGAAGAGGAGGAGGAGGAG back to topCoding sequence (CDS) from alignment at P-canaliculata_contig100396:2..589+ >mRNA_P-canaliculata_contig100396.100.1 ID=mRNA_P-canaliculata_contig100396.100.1|Name=mRNA_P-canaliculata_contig100396.100.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=864bp|location=Sequence derived from alignment at P-canaliculata_contig100396:2..589+ (Pelvetia canaliculata dioecious)
ATGCTGTATATCACACCTTTGGCAATATCAAGGGTCAATATTGCTTTGGA
TGATTGGGATGCCGGATACCAGTCTGGCTCGTGCTCCGATGAGTCTTCTG
TTGATACTGAGGTTGAGGACACCGAGCCAGCACCAAGACGATCATCTTCT
GTTGTTCAGGACGTAGAAGTCACAGACGTCACCCCGGCACCAACACGCTC
AGCTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTACTGGTGCTGCTG
GTGCTACTGGTGCTGCTGATGCTGCTGGGGCTGCAGCAGCGAAGGCCCGT
CAACCAACTATAGCGAGATTCTTCACTTCAAAGGAAGCTCCCACCCCTCA
GCAGCCGCGGGCGAAGGAGAAGAGAGCGGAACAGCGGCAGAGAGATGTGG
CTGCTGCTCTTGCCAACCCCACCGCGCCATAGATGCTGTATATCACACCT
TTGGCAATATCAAGGGTCAATATTGCTTTGGATGATTGGGATGCCGGATA
CCAGTCTGGCTCGTGCTCCGATGAGTCTTCTGTTGATACTGAGGTTGAGG
ACACCGAGCCAGCACCAAGACGATCATCTTCTGTTGTTCAGGACGTAGAA
GTCACAGACGTCACCCCGGCACCAACACGCTCAGCTGGTGCTGCTGGTGC
TGCTGGTGCTGCTGGTGCTACTGGTGCTGCTGGTGCTACTGGTGCTGCTG
ATGCTGCTGGGGCTGCAGCAGCGAAGGCCCGTCAACCAACTATAGCGAGA
TTCTTCACTTCAAAGGAAGCTCCCACCCCTCAGCAGCCGCGGGCGAAGGA
GAAGAGAGCGGAACAGCGGCAGAGAGATGTGGCTGCTGCTCTTGCCAACC
CCACCGCGCCATAG back to top
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