mRNA_P-canaliculata_contig100373.97.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig100373.97.1
Unique NamemRNA_P-canaliculata_contig100373.97.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig100373.97.1 vs. uniprot
Match: UPI000429C37C (thioredoxin family protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI000429C37C)

HSP 1 Score: 453 bits (1166), Expect = 5.460e-153
Identity = 218/307 (71.01%), Postives = 257/307 (83.71%), Query Frame = 1
Query:   25 FVWLLALSMVGPAFAGESEPVDTGKVTASIVSTHDSVAPGQEFYIALRTVLNEGWHTYWRNPGDSGEPVQINWELPEGITAGEISWPLPRPIPTGPIVNYGFEGTPLFPVKFTVGPDVQLGSDITVTSNFYYLVCADICIPEDGSVSLSIAVGEPVEDVRWSAEIQAALAASPIGGEVQGAIQRSGETVDISFIDLPDGDFSDAYFFPYDQGVIGHSNPQAVTRGAEGLRLSTTPEYLWEETVPDTLEGVLTYEEGGELKGTKVALAVGQSLNIGAAAGPKAAVGGVTLWTAIIGALIGGLILNLMP 945
            F+ LLA  +  PA A +S PVDTGKVTAS+VS+HDSVAPGQ F++ALRT L++ WHTYWRNPGDSGEPVQINW+LP+G+TAG I       IPTGPIVNYGFEG PLFPVKFTV P V+ GS IT+ S FYYLVC D+CIPE GSVSL IA+GE VED+ W  EI AALAA+P  G++QGAIQ+SG  +++SF DLP GDFS AYFFPY+QG++GHS PQ +TRG++GL+L+TTP+Y+W+  VPD  EGVLTY EGG+LKGT+VALAVGQSL+IGAAA PKA+ GGVTLWTAIIGALIGGLILNLMP
Sbjct:    5 FLSLLAWCLAAPALASQSLPVDTGKVTASLVSSHDSVAPGQSFHVALRTELDDLWHTYWRNPGDSGEPVQINWQLPQGVTAGAIXXXXXXTIPTGPIVNYGFEGAPLFPVKFTVDPSVESGSVITIVSEFYYLVCKDVCIPEQGSVSLPIAIGESVEDIGWKTEIDAALAATPKRGDIQGAIQKSGTALEMSFTDLPSGDFSKAYFFPYEQGILGHSEPQLITRGSDGLKLTTTPDYIWDNDVPDMFEGVLTYIEGGQLKGTEVALAVGQSLDIGAAALPKASAGGVTLWTAIIGALIGGLILNLMP 311          
BLAST of mRNA_P-canaliculata_contig100373.97.1 vs. uniprot
Match: A0A420WLH6_9PROT (Thiol:disulfide interchange protein DsbD n=1 Tax=Litorimonas taeanensis TaxID=568099 RepID=A0A420WLH6_9PROT)

HSP 1 Score: 326 bits (836), Expect = 2.470e-103
Identity = 158/318 (49.69%), Postives = 221/318 (69.50%), Query Frame = 1
Query:    1 MRGLIWTVFVWLLALSMVGP--AFAGESEPVDTGKVTASIVSTHDSVAPGQEFYIALRTVLNEGWHTYWRNPGDSGEPVQINWELPEGITAGEISWPLPRPIPTGPIVNYGFEGTPLFPVKFTVGPDVQLGSDITVTSNFYYLVCADICIPEDGSVSLSIAVGEPVEDVRWSAEIQAALAASPIGGEVQGAIQRSGETVDISFIDLPDGDFSDAYFFPYDQGVIGHSNPQAVTRGAEGLRLSTTPEYLWEETVPDTLEGVLTYEEGGELKGTKVALAVGQSLNIGAA-AGPKAAVGGVTLWTAIIGALIGGLILNLMP 945
            M+  + ++F +L+++  +    A A ES  +DTGKV AS+VS+HDS APG+  ++ALRTVL++GWHTYWRNPGDSGEPVQ++W L  G   GEI WPLP  +PTGPI+NYGFEG PLFPV   V     +G+  T+  +FYYLVC D+CIPE+G  S+ + +GE V+DV W A I  A+  +P    V+  + ++ +T  I+  +LP+GDFS+AYFFP+DQG++ HS PQ V  G +G+ L++  +Y W+E +PDTL GVL+YE+ G   G ++AL VG +L++G + A  + A   + L  AI  AL+GGLILNLMP
Sbjct:    1 MKAFLLSLFAFLISILPLTALTAHAAESAEIDTGKVVASLVSSHDSAAPGETIHVALRTVLDKGWHTYWRNPGDSGEPVQLDWVLGAGWEVGEIVWPLPMTLPTGPIINYGFEGAPLFPVTLKVPETAAIGTVETIEVDFYYLVCKDVCIPENGVASIDLRIGENVKDVLWEALINEAITQAPKPVSVKAGVSKTNDTATITVTELPEGDFSNAYFFPFDQGILMHSEPQKVELGTKGIALTSPSDYAWDEGLPDTLSGVLSYEQNGRSVGAEIALTVGDNLDVGLSPAKGQLAESNIGLVGAIFAALLGGLILNLMP 318          
BLAST of mRNA_P-canaliculata_contig100373.97.1 vs. uniprot
Match: A0A8J3G3D8_9PROT (Thiol:disulfide interchange protein DsbD n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3G3D8_9PROT)

HSP 1 Score: 308 bits (789), Expect = 1.960e-96
Identity = 158/317 (49.84%), Postives = 213/317 (67.19%), Query Frame = 1
Query:    1 MRGLIWTVFVWLLALSMVGPAFAGESEPVDTGKVTASIVSTHDSVAPGQEFYIALRTVLNEGWHTYWRNPGDSGEPVQINWELPEGITAGEISWPLPRPIPTGPIVNYGFEGTPLFPVKFTVGPDVQLGSDITVTSNFYYLVCADICIPEDGSVSLSIAVGEPVE-DVRWSAEIQAALAASPIGGEVQGAIQRSGETVDISFIDLPDGDFSDAYFFPYDQGVIGHSNPQAVTRGAEGLRLSTTPEYLWEETVPDTLEGVLTYEEGGELKGTKVALAVGQSLNIGA-AAGPKAAVGGVTLWTAIIGALIGGLILNLMP 945
            MR L  T+ +WL A +    A A  S P+DTGKV AS++S+H +VAPG+ F IAL+T L++ WHTYWRNPGDSGEPVQINW +P  +T G+I WPLP PIPTGPI+NYGFEG PLFPV FT+  D  +GS I V ++ YYLVC DICIPE+G++ + + V +  E + R +A I  A+  +P    +  A+Q +G  + + F DLP GDFS+AYFFPYD  ++ HS+PQ V+ G  G+++ TT  + W E   +  +GVL ++  G   G  V +A G +L++   +  P  +   +TLW AI GALIGGLILNLMP
Sbjct:    1 MRALFLTLLLWLTATT---GALATSSLPIDTGKVEASLLSSHYTVAPGETFQIALKTELDDHWHTYWRNPGDSGEPVQINWTVPGTVTTGDIVWPLPAPIPTGPIINYGFEGAPLFPVDFTLAADAAIGSVIEVEADVYYLVCKDICIPENGTLRIILQVADESELNDRNAAAIAEAINVAPRALAIPAAMQANGAALSLQFSDLPAGDFSNAYFFPYDNTLLIHSDPQTVSLGESGIQIDTTASFGWGEGFSEPQQGVLAFDVKGVRTGRIVTIATGPALSVSVDSLLPTTSGASITLWGAIFGALIGGLILNLMP 314          
BLAST of mRNA_P-canaliculata_contig100373.97.1 vs. uniprot
Match: A0A848V3W7_9PROT (Thiol:disulfide interchange protein n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V3W7_9PROT)

HSP 1 Score: 257 bits (657), Expect = 7.700e-77
Identity = 142/326 (43.56%), Postives = 198/326 (60.74%), Query Frame = 1
Query:    1 MRGLIWTVFVWLLALSMVGPAFAGESEPVDTGKVTASIVSTHDSVAPGQEFYIALRTVLNEGWHTYWRNPGDSGEPVQIN-WELPEGITAGEISWPLPRPIPTGP----IVNYGFEGTPLFPVKFTVGPDVQLGSDITVTSNFYYLVCADICIPEDGSVSLSIAVGEPVEDVRWSAEIQAALAASPIGGEVQGAIQRSGETVDISFIDLPDGDFSDAYFFPYDQGVIGHSNPQAVTRGAEGLRLSTTPEYLWEETVPDTLEGVLTYEEGGELKGTKVALAVGQSLNIGAAAGPKAAVG------GVTLWTAIIGALIGGLILNLMP 945
            MR +I T+    + +S V  A A ES  VDTG V A +VS H  VAPGQ F+IALR ++++GWHTYW NPGDSGEPVQI  W+  + +T GEI WPLPR IPTG     ++NYGF+ + +FPV  TV PD  LG  +++  +FYYLVC DIC+PE   +SL++ VGEP  D +WS  I+ + A SP  G +   I +  +   + F +LP G++  A+FFP++QG+I  S PQ +T   +GL++ T   + W++  P+T  GVL Y       G  V +      +IGA A   A VG       + L + I  A +GG++LN+MP
Sbjct:    1 MRFIILTLSALWIWMS-VTDAQASESALVDTGYVNAQLVSDHSEVAPGQTFHIALRQLMDKGWHTYWYNPGDSGEPVQIKGWDKSDALTTGEIIWPLPRAIPTGSDDFILINYGFDDSAVFPVPVTVSPDAALGDVLSIEGDFYYLVCEDICVPEGTKLSLNVIVGEPKLDEQWSGLIEQSRAKSPKLGTIDAGIIKRDKRAILRFKNLPTGEYDQAHFFPWEQGIIEPSVPQVLTITNQGLQIETDTGFGWKKDPPETAGGVLRYLGKDGPVGVDVIVKTDSIPDIGAVASAPATVGPDNDTANIGLLSMIFAAFLGGVVLNIMP 325          
BLAST of mRNA_P-canaliculata_contig100373.97.1 vs. uniprot
Match: A0A520XQ99_9ACTN (Thiol:disulfide interchange protein n=2 Tax=Bacteria TaxID=2 RepID=A0A520XQ99_9ACTN)

HSP 1 Score: 252 bits (644), Expect = 5.520e-75
Identity = 136/306 (44.44%), Postives = 187/306 (61.11%), Query Frame = 1
Query:   34 LLALSMVGPAFAGESEPVDTGKVTASIVSTHDSVAPGQEFYIALRTVLNEGWHTYWRNPGDSGEPVQINWELPEGITAGEISWPLPRPIPTGPIVNYGFEGTPLFPVKFTVGPDVQLGSDITVTSNFYYLVCADICIPEDGSVSLSIAVGEPVEDVRWSAEIQAALAASPIGGEVQGAIQRSGETVDISFIDLPDGDFSDAYFFPYDQGVIGHSNPQAVTRGAEGLRLSTTPEYLWEETVPDTLEGVLTYEEG-GELKGTKVALAVGQSLNIGAAAGPKAA-VGGVTLWTAIIGALIGGLILNLMP 945
            LL L +   A A E+EP DTG+V A +V++HD V  G +FY+AL T ++  WH YW+NPGDSGEPV I W     +  GEI WPLP  IPTGPI+NYGF+G  +FP+  T   D+Q G  I++ ++  YLVC DICIPE   +S+++ +GE + D RW+  I++ALA +P   ++   +Q     +   F +L   D  +AYFFP   G+I HS PQ +  G  GLRLS    +  ++ +   ++GVL  E   G++ G  V      S+ IG  A P AA V  +T+ TA+IGA IGGLILNLMP
Sbjct:   15 LLGLCLSLTATASETEPTDTGRVVAQLVTSHDQVEAGDDFYVALVTTMDPEWHIYWKNPGDSGEPVDIYWGDSPSVDVGEIVWPLPATIPTGPIINYGFDGRVIFPMPVTAPEDLQDGDVISMDADITYLVCKDICIPEMAQLSVAVTIGEEIADDRWAYNIESALAEAPPPTDMIAGVQLENGEISFEF-ELDPTDIKEAYFFPETPGMINHSAPQTLALGETGLRLSVEAGFSLKDRLRGPIKGVLRSENAAGDVTGQWVTTHPDLSVAIGNVAQPVAANVSSLTVLTALIGAFIGGLILNLMP 319          
BLAST of mRNA_P-canaliculata_contig100373.97.1 vs. uniprot
Match: UPI0003736C32 (thioredoxin family protein n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI0003736C32)

HSP 1 Score: 234 bits (597), Expect = 4.640e-68
Identity = 123/313 (39.30%), Postives = 178/313 (56.87%), Query Frame = 1
Query:   22 VFVWLLALSMVGPAFAGESEPVDTGKVTASIVSTHDSVAPGQEFYIALRTVLNEGWHTYWRNPGDSGEPVQINWELPEGITAGEISWPLPRPIPTGPIVNYGFEGTPLFPVKFTVGPDVQLGSDITVTSNFYYLVCADICIPEDGSVSLSIAVGEPVEDVRWSAEIQAAL--AASPIGGEVQGAIQRSGETVDISFIDLPDGDFSDAYFFPYDQGVIGHSNPQAVTRGAEGLRLSTTPEYLWEETVPDTLEGVLTYEEGGELKGTKVALAVGQSLNIGAAAGPKAAV---GGVTLWTAIIGALIGGLILNLMP 945
            V  WL+A+++  P +A E+  V+  +   ++V+ HD +APGQ FY+A++  +  GWH YW+NPGDSGE +QI+ +      AGEI W  P+ + TGPI+NYG+EG  LFPV  T   D   G  +T++ + Y LVCA+ICIP     SLS+ VGEP  D RW   I+  L     P   +    +      VD++ ++L DG   DAY FP +   I  S+ Q +T G +GLR    P Y  E  V   +  +L + + GE KG  +    G  L++G A  P A+    G ++L  A++ AL+GG+ILNLMP
Sbjct:    5 VLCWLIAMTVFTPVYAAETSGVEIDESRVTVVTDHDVIAPGQSFYMAVQWAMEPGWHVYWKNPGDSGESLQIDLDPRTAFMAGEIIWATPKAVATGPIINYGYEGRALFPVLITASEDSVPGETLTLSGSAYALVCAEICIPRTVPFSLSLRVGEPQIDNRWQNNIERTLKKVPPPSAAKASAYLDDGALFVDVADMELADGVIEDAYIFPDEPSFISPSDAQQITLGPQGLRARLVPGYKTENGVESEIPFILAFTQDGEYKGVHLTAKPGPPLDVGLAVIPSASTIAGGEISLLIAVLFALLGGVILNLMP 317          
BLAST of mRNA_P-canaliculata_contig100373.97.1 vs. uniprot
Match: A0A525KXU3_9CAUL (Thiol:disulfide interchange protein n=1 Tax=Phenylobacterium sp. TaxID=1871053 RepID=A0A525KXU3_9CAUL)

HSP 1 Score: 228 bits (582), Expect = 7.350e-66
Identity = 131/315 (41.59%), Postives = 177/315 (56.19%), Query Frame = 1
Query:   34 LLALSMVGPAFAGESEPVDTGKVTASIVSTHDSVAPGQEFYIALRTVLNEGWHTYWRNPGDSGEPVQINWELPEGITAGEISWPLPRPIPTGPIVNYGFEGTPLFPVKFTVGPDVQLGSDITVTSNFYYLVCADICIPEDGSVSLSIAV--GEPVEDVRWSAEIQAALAASPIGGEVQGAIQRSGETVDISFID--LPDGDFSDAYFFPYDQGVIGHSNPQAVTRGAEGLRLSTTPEYLWE-ETVPDTLEGVLTYEEGGELKGTKVALAVGQSLNIGAAAGPKAAVGGVT------LWTAIIGALIGGLILNLMP 945
            L  L++  PA A   +PV+TG +TA +V+    +APGQ  ++ALR  +  GWHTYWRNPGDSGEP  + W LP G T G+I WP PR +P GP+VNYG+EG  L PV  T   + + G   T+++   +LVC +IC+PED  +S++I V  G    D  W A I   LA +P    +  A Q+ G  V ++     L   D  DAYF+P+D  VI H+ PQ + RG +GL L+ TP Y ++    P  L GVL  +     K  +VA   G      +  GP AA GG        L +A + A +GGLILNLMP
Sbjct:    5 LATLAVAAPALA---QPVNTGHLTAELVAQDQGIAPGQTIHLALRQQMLPGWHTYWRNPGDSGEPTSLKWTLPAGWTTGDIVWPTPRRLPVGPLVNYGYEGEVLLPVAVTAPANAKPGQTATLSAAASFLVCREICVPEDAKLSITIPVVAGGGGPDPTWGAPIARTLADAPKPAGLTAAFQKRGAAVALAIAGPVLQGADLHDAYFYPFDATVIDHAKPQTIDRGPQGLTLTLTPGYAFQGAAAPKALAGVLAVDG----KAYEVAANPGAPPAGASGLGPPAAKGGAAGGASLGLLSAAVFAFVGGLILNLMP 312          
BLAST of mRNA_P-canaliculata_contig100373.97.1 vs. uniprot
Match: A0A7C3C347_9PROT (Thiol:disulfide interchange protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=A0A7C3C347_9PROT)

HSP 1 Score: 228 bits (580), Expect = 1.630e-65
Identity = 123/314 (39.17%), Postives = 182/314 (57.96%), Query Frame = 1
Query:   34 LLALSMVGPAFAGESEPVDTGKVTASIVSTHDSVAPGQEFYIALRTVLNEGWHTYWRNPGDSGEPVQINWELPEGITAGEISWPLPRPIPTGPIVNYGFEGTPLFPVKFTVGPDVQLGSDITVTSNFYYLVCADICIPEDGSVSLSIAVGEPVEDVRWSAEIQAAL--AASPIGGEVQGAIQRSGETV-DISFIDLPDGDFSDAYFFPYDQGVIGHSNPQAVTRGAEGLRLSTTPEYLWEETVPDTLEGVLTYEEGGELKGTKVALAVGQSLN----IGAAAGP---KAAVGGVTLWTAIIGALIGGLILNLMP 945
            L+ L    P+ A ESEPVD+G+    +V+++D V PGQ+ YIAL   L   WHTYWRN G  G PV I+W++PE ++ G++ W LP+ + TGPIVNY FE   L P+   +    + G  +T+ +   YLVC ++C+PE   +S+S+ VG P +D RW   I   L  A  P      GA   +G+ + DI++ +       +AYFFPY Q          V++G +GLRL+ TP YL ++ + + +EGVL+++E GE    K A+ V  S      IG ++G    KA    + LW A++GA +GG++LNLMP
Sbjct:   14 LMTLVNTHPSAASESEPVDSGRAQVQLVTSYDQVEPGQDLYIALSFQLERHWHTYWRNAGGPGMPVDIDWDMPETLSIGDMVWSLPQIVKTGPIVNYAFEDRLLLPMPLHIADTAKPGDVLTINAEAAYLVCYEVCLPESAEISVSVLVGTPQKDNRWYGNIARTLKKAPKPNPDYKAGAALENGQLMLDIAWPNYDAKTIKNAYFFPYIQDTTDADKDPQVSKGTKGLRLALTPGYLLDDGITEDIEGVLSFDEKGEDGWQKTAVVVTASRTDMPAIGLSSGASTSKANGASIGLWAAVLGAFLGGMVLNLMP 327          
BLAST of mRNA_P-canaliculata_contig100373.97.1 vs. uniprot
Match: UPI0016756C6A (thioredoxin family protein n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI0016756C6A)

HSP 1 Score: 224 bits (572), Expect = 1.490e-64
Identity = 127/321 (39.56%), Postives = 191/321 (59.50%), Query Frame = 1
Query:    1 MRGLIWTVFVWLLALSMVGPAFAGESEPVDTGKVTASIVSTHDSVAPGQEFYIALRTVLNEGWHTYWRNPGDSGEPVQINWELPEGITAGEISWPLPRPIPTGPIVNYGFEGTPLFPVKFTVGPDVQLGSDITVTSNFYYLVCADICIPEDGSVSLSIAVGEPVEDVRWSAEIQAALAASPIGGEVQG-AIQRSGET-VDISFIDLPDGDFSDAYFFPYDQGVIGHSNPQAVTRGAEGLRLSTTPEYLWEETVPDTLEGVLTYEEGGELKGTKVALAVGQSLNIGAAAG-PKAAVG---GVTLWTAIIGALIGGLILNLMP 945
            +R +I T+ +W++A    G A A +S P+DTG    S+VS HD+VA GQ F +ALR   +  W+TYWRN GDSGE ++I+W LP+G++AG I WP P+    GPIV+Y   G    PV+  V   V +   +T+ ++ Y+LVC D+C+PEDG++SL + +G+ V + + + ++Q ALA  P  G   G A+  +G+  +DI      + DF+ A  FP+   ++ HS+P + T  A G+R + TP Y W++  P      L   +G   +   V +    S+NIGA +    AA+G   G+  W A+ GAL+GGLILNLMP
Sbjct:    2 LRWIILTLSLWMMA----GSATARQSFPLDTGYTKISLVSDHDTVAAGQSFTVALRMQFDGDWYTYWRNAGDSGEALRIDWTLPDGVSAGPIQWPAPKVKSVGPIVSYAMGGDVWLPVEIKVDASVDISRPMTLNAHAYFLVCDDVCVPEDGALSLPMGLGKAVLNPKSAPKVQKALAKIPQMGAANGSALLEAGQLRIDIQ---SDETDFAGAEIFPHKNPILAHSDPISRTVAANGVRYTATPGYGWDKETPADFAATLVNADG---RAEIVPITTNGSVNIGAISNMDSAAIGDGAGLGFWGAVFGALMGGLILNLMP 312          
BLAST of mRNA_P-canaliculata_contig100373.97.1 vs. uniprot
Match: A0A519PUB1_9CAUL (Thiol:disulfide interchange protein (Fragment) n=1 Tax=Brevundimonas sp. TaxID=1871086 RepID=A0A519PUB1_9CAUL)

HSP 1 Score: 214 bits (544), Expect = 6.930e-64
Identity = 121/309 (39.16%), Postives = 173/309 (55.99%), Query Frame = 1
Query:   40 ALSMVGPAFAGESEPVDTGKVTASIVSTHDSVAPGQEFYIALRTVLNEGWHTYWRNPGDSGEPVQINWELPEGITAGEISWPLPRPIPTGPIVNYGFEGTPLFPVKFTVGPDVQLGSDITVTSNFYYLVCADICIPEDGSVSLSIAVGEPVEDVR--WSAEIQAALAASPIGGEVQGAIQRSGETVDISFID--LPDGDFSDAYFFPYDQGVIGHSNPQAVTRGAEGLRLSTTPEYLWEE-TVPDTLEGVLTYEEGGELKGTKVALAVGQSLNIGAAAGPKAAVGGVTLWTAIIGAL--IGGLILNLMP 945
            AL +  PA A   +PVDTG + A +V+   S+APG   Y+A+R  +++GWHTYWRN GDSGE  ++ W LP G TAG+I WP P   PTGP++NYG++G  L PV  T   + + G  +T+ +   +LVC +IC+PED  ++LS+ + E + D    WS  I  AL+ +P          + G  + ++     L   D S+AYFFP+D  VI H+ PQA+ RG +GL L+ TP Y ++E   P T+ GVL+  +        V      +  +GA     A   G  L   +  A   +GGLILNLMP
Sbjct:   17 ALLVAAPALA---QPVDTGHLVAELVARDQSIAPGATTYVAVRQKIDKGWHTYWRNSGDSGEATRVVWTLPPGWTAGDIVWPAPTRQPTGPLMNYGYQGEVLLPVPITAPANAKPGETVTLKAAASFLVCEEICVPEDAVLTLSLPLVEGLADPNPAWSGPIAKALSDAPAPANFASVFAKQGTNIVLAVTGEGLKGADVSEAYFFPFDSTVIDHAKPQAIERGPDGLTLTLTPGYAFQEGDGPKTMAGVLSLGDRAYEISANVGTPPPGASGLGAPPSKAAXXXGGALGLPLAAAFAFLGGLILNLMP 322          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100373.97.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000429C37C5.460e-15371.01thioredoxin family protein n=1 Tax=Hellea balneole... [more]
A0A420WLH6_9PROT2.470e-10349.69Thiol:disulfide interchange protein DsbD n=1 Tax=L... [more]
A0A8J3G3D8_9PROT1.960e-9649.84Thiol:disulfide interchange protein DsbD n=1 Tax=A... [more]
A0A848V3W7_9PROT7.700e-7743.56Thiol:disulfide interchange protein n=1 Tax=Hellea... [more]
A0A520XQ99_9ACTN5.520e-7544.44Thiol:disulfide interchange protein n=2 Tax=Bacter... [more]
UPI0003736C324.640e-6839.30thioredoxin family protein n=1 Tax=Robiginitomacul... [more]
A0A525KXU3_9CAUL7.350e-6641.59Thiol:disulfide interchange protein n=1 Tax=Phenyl... [more]
A0A7C3C347_9PROT1.630e-6539.17Thiol:disulfide interchange protein n=1 Tax=Hellea... [more]
UPI0016756C6A1.490e-6439.56thioredoxin family protein n=1 Tax=Litorimonas cla... [more]
A0A519PUB1_9CAUL6.930e-6439.16Thiol:disulfide interchange protein (Fragment) n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100373contigP-canaliculata_contig100373:85..1029 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score453.0
Seed ortholog evalue1.2e-124
Seed eggNOG ortholog1121948.AUAC01000008_gene839
Preferred namedsbD
KEGG koko:K04084
KEGG TC5.A.1.1
EggNOG free text desc.to be involved in C-type cytochrome biogenesis
EggNOG OGs1MU8W@1224,2TTUM@28211,43WGD@69657,COG4232@1,COG4232@2,COG4233@1,COG4233@2
EC1.8.1.8
COG Functional cat.CO
Best tax levelHyphomonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03110
Hectar predicted targeting categorysignal peptide
Exons1
Model size945
Cds size945
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815577.0512931-CDS-P-canaliculata_contig100373:84..10291622815577.0512931-CDS-P-canaliculata_contig100373:84..1029Pelvetia canaliculata dioeciousCDSP-canaliculata_contig100373 85..1029 +
1693494146.8523095-CDS-P-canaliculata_contig100373:84..10291693494146.8523095-CDS-P-canaliculata_contig100373:84..1029Pelvetia canaliculata dioeciousCDSP-canaliculata_contig100373 85..1029 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100373.97.1prot_P-canaliculata_contig100373.97.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig100373 85..1029 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig100373.97.1

>prot_P-canaliculata_contig100373.97.1 ID=prot_P-canaliculata_contig100373.97.1|Name=mRNA_P-canaliculata_contig100373.97.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=315bp
MRGLIWTVFVWLLALSMVGPAFAGESEPVDTGKVTASIVSTHDSVAPGQE
FYIALRTVLNEGWHTYWRNPGDSGEPVQINWELPEGITAGEISWPLPRPI
PTGPIVNYGFEGTPLFPVKFTVGPDVQLGSDITVTSNFYYLVCADICIPE
DGSVSLSIAVGEPVEDVRWSAEIQAALAASPIGGEVQGAIQRSGETVDIS
FIDLPDGDFSDAYFFPYDQGVIGHSNPQAVTRGAEGLRLSTTPEYLWEET
VPDTLEGVLTYEEGGELKGTKVALAVGQSLNIGAAAGPKAAVGGVTLWTA
IIGALIGGLILNLMP
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mRNA from alignment at P-canaliculata_contig100373:85..1029+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig100373.97.1 ID=mRNA_P-canaliculata_contig100373.97.1|Name=mRNA_P-canaliculata_contig100373.97.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=945bp|location=Sequence derived from alignment at P-canaliculata_contig100373:85..1029+ (Pelvetia canaliculata dioecious)
ATGCGCGGTTTAATATGGACGGTCTTTGTCTGGCTTCTGGCTCTGTCGAT GGTGGGGCCGGCTTTCGCGGGTGAGTCTGAGCCTGTCGATACCGGAAAAG TCACGGCCTCGATTGTCAGCACCCATGATAGCGTTGCGCCGGGGCAAGAG TTTTACATCGCGCTGCGCACCGTGTTGAATGAGGGCTGGCACACCTATTG GCGCAATCCGGGCGATAGCGGGGAGCCTGTTCAAATCAATTGGGAGTTGC CCGAAGGCATCACGGCGGGAGAGATCAGCTGGCCGCTGCCTCGCCCGATA CCCACGGGGCCGATTGTCAATTACGGCTTTGAAGGCACGCCGCTTTTCCC AGTGAAATTTACTGTCGGTCCGGATGTGCAGCTCGGCTCAGACATAACAG TCACCTCTAACTTTTATTATCTCGTCTGCGCGGATATTTGTATCCCTGAA GACGGCAGCGTGAGTTTGTCTATTGCCGTTGGTGAGCCCGTGGAAGACGT GCGGTGGAGCGCTGAAATTCAGGCCGCTCTGGCCGCTTCGCCCATAGGCG GGGAAGTGCAAGGCGCAATTCAGAGATCAGGCGAAACCGTCGATATAAGC TTTATCGATTTGCCTGATGGCGATTTTTCTGACGCTTATTTCTTCCCCTA TGACCAAGGCGTTATCGGTCACAGCAACCCACAAGCCGTGACGCGCGGCG CGGAGGGTCTGCGCCTGTCGACAACGCCGGAATATCTTTGGGAAGAGACT GTGCCGGACACCCTTGAAGGCGTTCTGACTTATGAAGAGGGCGGCGAGTT AAAGGGCACTAAGGTTGCTTTGGCGGTCGGACAAAGCCTCAATATCGGCG CGGCGGCAGGTCCCAAAGCTGCAGTTGGCGGGGTGACGCTCTGGACCGCA ATTATCGGCGCGTTGATTGGCGGGCTCATTCTCAATCTCATGCCC
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Coding sequence (CDS) from alignment at P-canaliculata_contig100373:85..1029+

>mRNA_P-canaliculata_contig100373.97.1 ID=mRNA_P-canaliculata_contig100373.97.1|Name=mRNA_P-canaliculata_contig100373.97.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1890bp|location=Sequence derived from alignment at P-canaliculata_contig100373:85..1029+ (Pelvetia canaliculata dioecious)
ATGCGCGGTTTAATATGGACGGTCTTTGTCTGGCTTCTGGCTCTGTCGAT
GGTGGGGCCGGCTTTCGCGGGTGAGTCTGAGCCTGTCGATACCGGAAAAG
TCACGGCCTCGATTGTCAGCACCCATGATAGCGTTGCGCCGGGGCAAGAG
TTTTACATCGCGCTGCGCACCGTGTTGAATGAGGGCTGGCACACCTATTG
GCGCAATCCGGGCGATAGCGGGGAGCCTGTTCAAATCAATTGGGAGTTGC
CCGAAGGCATCACGGCGGGAGAGATCAGCTGGCCGCTGCCTCGCCCGATA
CCCACGGGGCCGATTGTCAATTACGGCTTTGAAGGCACGCCGCTTTTCCC
AGTGAAATTTACTGTCGGTCCGGATGTGCAGCTCGGCTCAGACATAACAG
TCACCTCTAACTTTTATTATCTCGTCTGCGCGGATATTTGTATCCCTGAA
GACGGCAGCGTGAGTTTGTCTATTGCCGTTGGTGAGCCCGTGGAAGACGT
GCGGTGGAGCGCTGAAATTCAGGCCGCTCTGGCCGCTTCGCCCATAGGCG
GGGAAGTGCAAGGCGCAATTCAGAGATCAGGCGAAACCGTCGATATAAGC
TTTATCGATTTGCCTGATGGCGATTTTTCTGACGCTTATTTCTTCCCCTA
TGACCAAGGCGTTATCGGTCACAGCAACCCACAAGCCGTGACGCGCGGCG
CGGAGGGTCTGCGCCTGTCGACAACGCCGGAATATCTTTGGGAAGAGACT
GTGCCGGACACCCTTGAAGGCGTTCTGACTTATGAAGAGGGCGGCGAGTT
AAAGGGCACTAAGGTTGCTTTGGCGGTCGGACAAAGCCTCAATATCGGCG
CGGCGGCAGGTCCCAAAGCTGCAGTTGGCGGGGTGACGCTCTGGACCGCA
ATTATCGGCGCGTTGATTGGCGGGCTCATTCTCAATCTCATGCCCATGCG
CGGTTTAATATGGACGGTCTTTGTCTGGCTTCTGGCTCTGTCGATGGTGG
GGCCGGCTTTCGCGGGTGAGTCTGAGCCTGTCGATACCGGAAAAGTCACG
GCCTCGATTGTCAGCACCCATGATAGCGTTGCGCCGGGGCAAGAGTTTTA
CATCGCGCTGCGCACCGTGTTGAATGAGGGCTGGCACACCTATTGGCGCA
ATCCGGGCGATAGCGGGGAGCCTGTTCAAATCAATTGGGAGTTGCCCGAA
GGCATCACGGCGGGAGAGATCAGCTGGCCGCTGCCTCGCCCGATACCCAC
GGGGCCGATTGTCAATTACGGCTTTGAAGGCACGCCGCTTTTCCCAGTGA
AATTTACTGTCGGTCCGGATGTGCAGCTCGGCTCAGACATAACAGTCACC
TCTAACTTTTATTATCTCGTCTGCGCGGATATTTGTATCCCTGAAGACGG
CAGCGTGAGTTTGTCTATTGCCGTTGGTGAGCCCGTGGAAGACGTGCGGT
GGAGCGCTGAAATTCAGGCCGCTCTGGCCGCTTCGCCCATAGGCGGGGAA
GTGCAAGGCGCAATTCAGAGATCAGGCGAAACCGTCGATATAAGCTTTAT
CGATTTGCCTGATGGCGATTTTTCTGACGCTTATTTCTTCCCCTATGACC
AAGGCGTTATCGGTCACAGCAACCCACAAGCCGTGACGCGCGGCGCGGAG
GGTCTGCGCCTGTCGACAACGCCGGAATATCTTTGGGAAGAGACTGTGCC
GGACACCCTTGAAGGCGTTCTGACTTATGAAGAGGGCGGCGAGTTAAAGG
GCACTAAGGTTGCTTTGGCGGTCGGACAAAGCCTCAATATCGGCGCGGCG
GCAGGTCCCAAAGCTGCAGTTGGCGGGGTGACGCTCTGGACCGCAATTAT
CGGCGCGTTGATTGGCGGGCTCATTCTCAATCTCATGCCC
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