mRNA_P-canaliculata_contig100356.95.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_P-canaliculata_contig100356.95.1 vs. uniprot
Match: UPI0016765D31 ((2Fe-2S)-binding protein n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI0016765D31)

HSP 1 Score: 109 bits (272), Expect = 3.690e-30
Identity = 52/63 (82.54%), Postives = 57/63 (90.48%), Query Frame = 1

Query:    1 MIHCICNNINTAKVDAAAANGAETAACVQRACGTRFNCGQCRVDIQSRLQAWRIANPALEAAE 189
            MIHCICNNINTAKVDAAAA GAETAACVQ+ACGTRFNCGQCRVDI +RL++ R  NP L+AAE
Sbjct:    1 MIHCICNNINTAKVDAAAAQGAETAACVQKACGTRFNCGQCRVDIDARLRSLRALNPILQAAE 63

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BLAST of mRNA_P-canaliculata_contig100356.95.1 vs. uniprot
Match: UPI00167B3EB6 ((2Fe-2S)-binding protein n=1 Tax=Algimonas arctica TaxID=1479486 RepID=UPI00167B3EB6)

HSP 1 Score: 100 bits (248), Expect = 1.700e-26
Identity = 46/63 (73.02%), Postives = 52/63 (82.54%), Query Frame = 1

Query:    1 MIHCICNNINTAKVDAAAANGAETAACVQRACGTRFNCGQCRVDIQSRLQAWRIANPALEAAE 189
            MIHCICNNINT  V+AAAA GAETAACVQRACG+RF CGQCR DI+  L++WR   P L+AAE
Sbjct:    1 MIHCICNNINTKAVEAAAAKGAETAACVQRACGSRFRCGQCRTDIEQHLRSWRQTRPMLDAAE 63

[Close]

BLAST of mRNA_P-canaliculata_contig100356.95.1 vs. uniprot
Match: UPI00041620B7 ((2Fe-2S)-binding protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI00041620B7)

HSP 1 Score: 98.6 bits (244), Expect = 1.230e-25
Identity = 46/63 (73.02%), Postives = 51/63 (80.95%), Query Frame = 1

Query:    1 MIHCICNNINTAKVDAAAANGAETAACVQRACGTRFNCGQCRVDIQSRLQAWRIANPALEAAE 189
            MIHC+CNNINTAKVD AA+ GAE A  V R CGT+FNCGQCRV I +RL+ WR  NPALEAAE
Sbjct:   22 MIHCLCNNINTAKVDIAASQGAERAKDVMRVCGTKFNCGQCRVSINARLEEWRAINPALEAAE 84

[Close]

BLAST of mRNA_P-canaliculata_contig100356.95.1 vs. uniprot
Match: A0A520XME1_9ACTN ((2Fe-2S)-binding protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XME1_9ACTN)

HSP 1 Score: 60.1 bits (144), Expect = 1.200e-10
Identity = 35/63 (55.56%), Postives = 39/63 (61.90%), Query Frame = 1

Query:    1 MIHCICNNINTAKVDAAAANGAETAACVQRACGTRFNCGQCRVDIQSRLQAWRIANPALEAAE 189
            MIHC+CN INT KVD AAA GA    CVQ   G +FNCG+C   I+ RL A       LEAAE
Sbjct:    1 MIHCLCNQINTKKVDEAAACGARRPKCVQAHFGHKFNCGKCAQSIRERL-AEISGVDYLEAAE 62

[Close]

BLAST of mRNA_P-canaliculata_contig100356.95.1 vs. uniprot
Match: UPI0018F02B14 (hypothetical protein n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI0018F02B14)

HSP 1 Score: 53.5 bits (127), Expect = 6.040e-8
Identity = 29/49 (59.18%), Postives = 31/49 (63.27%), Query Frame = 1

Query:    1 MIHCICNNINTAKVDAAAANGAETAACVQRACGTRFNCGQCRVDIQSRL 147
            MIHC+CNNINTAKVD AA  GA     V    G  FNCGQC+  I  RL
Sbjct:    1 MIHCVCNNINTAKVDEAAHAGACRPKDVLAHHGKAFNCGQCKGSIAERL 49

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig100356.95.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig100356.95.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
UPI0016765D31	3.690e-30	82.54	(2Fe-2S)-binding protein n=1 Tax=Litorimonas clado...	[more]
UPI00167B3EB6	1.700e-26	73.02	(2Fe-2S)-binding protein n=1 Tax=Algimonas arctica...	[more]
UPI00041620B7	1.230e-25	73.02	(2Fe-2S)-binding protein n=1 Tax=Hellea balneolens...	[more]
A0A520XME1_9ACTN	1.200e-10	55.56	(2Fe-2S)-binding protein n=1 Tax=Acidimicrobiales ...	[more]
UPI0018F02B14	6.040e-8	59.18	hypothetical protein n=1 Tax=Robiginitomaculum ant...	[more]

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815576.969576-CDS-P-canaliculata_contig100356:563..755	1622815576.969576-CDS-P-canaliculata_contig100356:563..755	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig100356 564..755 +
1693494146.8117127-CDS-P-canaliculata_contig100356:563..755	1693494146.8117127-CDS-P-canaliculata_contig100356:563..755	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig100356 564..755 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig100356.95.1	prot_P-canaliculata_contig100356.95.1	Pelvetia canaliculata dioecious	polypeptide	P-canaliculata_contig100356 564..755 +