mRNA_P-canaliculata_contig1003.85.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig1003.85.1 vs. uniprot
Match: A0A6H5JC63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC63_9PHAE) HSP 1 Score: 1319 bits (3414), Expect = 0.000e+0 Identity = 800/1564 (51.15%), Postives = 982/1564 (62.79%), Query Frame = 1 Query: 1 RQGDQDNISFEGFYRTDVPIYHGMKNFARNEGGRRAGEKGRAPLIRYFSRQARGSISDERVARVQLWRGIKRQRHRLALETNTADVGGGKGTHTEGDSSSMPPSAILPLQAKHDPSARSRSQEQSPGADFLPVDPTVVAISPSNEDTGTLKGGDPAHTLDVGAPTESLEQWVTRRTKEFNRLTREQPKSENLWLKFADFQEEAVRAIQGGGEFVRSPSSAVVHTTLEKRASVLEGALRRNPTSVKLRKAQLHVAGQLHEHDAVDSLWKKAIEKSNHSLALWLRYLHFKAGHFASFSVEEQRSTFSLCIEALECRRREARQAREKDEKARGVFIMGDRSMLE-DGKEHVRAEKELLDVLWSYCVMERAAGYHERALGALQAMVELNITSRDKPVSVDDLEAFWESEFPRIGDAHPSMAGISQWREASLTRNDSKNDRSRQEATSSTNVSSASIVQVPSGERAAVG-RKLPVVKALDARGKRKRAVDFFSEDAPAPGVPTPGGQGERHTPLWRMRTGLSNPSKGDSDERVGVTYVEDVLEKAYQAAEALSSKTTAFQSADGDLASSPLSR-DASRGFDTDGEDAPDRAPLESVVGPENRLMREETMDDTGGLSISSISSKTRNTRERQLIEEIRQGPIAPTMQGEPVPRGKPGPAPQDEARDERRGGNDGHCARAVEADGLIWVDESQATAYSVRHGYRINVQGAQDSMSGLEYGRILNQVRGDAKDDRGGNATT---AAARERIRYE---EMAKEATVQEDMLEDVPESDPFSSWATSEDRMTREQWQPLRATVDEDGAAEQPDRVVFVEDIRPLLSTLSHPASLGTLVNMLVSVGGLVFPRSNVSHSHKFMSEACSAASLGDGGLAGSLISAVSDGLQAVWKASGAELPVSGRSVVRCTGRPGS-LPPPVVCTTADQFLLLTDELVGDVSRQKFMRNVLHHLIRAPQSSPRPSPIPGSTNSSGIWSDCGDMLVQLQCTLVLFEGYLASAAGAYSGHYGRAGAPGKTSIGSKGGKTLADNESYGHEARKVAKSLLEASQASATDLRLWSSYVQLLAILGNRDEAIKVAEKALSLVEALPESKKSLSAEMFWIAFRLHAGLPLNPRDPHAGEEIPSNGTGLELLANLFNR-NETRNGKRQMALLLLCSFAEGRFDRSK-KPKKLKRDDK--DPEDGVISPPRLMAARKLMADRVARLASQLPQGKTDGVSSLPQCHSLLDMTPPFMYHSVAWVWMEYLSRGPDEAEHAMSECLAMVKVKMNATNATQTNDSADDDHFPGSRGLE--LRGAVSGNKPYEWDVVLDGTALGVCLERMHRSFSELVMLAQRFDPVKTGPRRVRMVLLRGLQSCPAEPGMLCMLMATEQFSGSQQRLVHHLSEASAPEAPYIQRALDWEQGPTPFEWILSATHQVMRCVHEARHVFVAPEAAMEKGGSASNESTRKTVGEEKGGRDRALCVKKWLPGSYARLRRSMEKAVTHATGRQMTLLWRMYMSLEAMRGNHKQAKQLFWRAIHACPGNKALWMDSLRGDQRAHIGSLGLRPAFRAKELQEISDAMLEKSLHVRAEP 4644
R+GD DN+SF FYR DVP+Y GM + A + K R + RYF RG+ + + +QLW+G KR+ H LA + + T ++P + EQ DFLPV P V ++ G D HTL SLEQWV R+TKEFN TRE+P+S+++WL++ADFQE+AVRA+ GG ++ P++A+V TLEKR+SVLE ALR+NP SV+L QLH+A Q+ EH VDSLW+ AIEKS+ S LWLRYL FKA HFASFSV QRS ++ CI ALE +R EA +A E+D++A+GVFIM ++S+LE + KE AE+ LLD LW+YCV ERA+GYHERALG LQAMVELN S +S+D +FW+SE PRIGD HP+ AG+++W E T+ T S S + +G++ V RK + + RGKRKRAVDFF ED PA ++ E+ T +VLEKAYQ A+A++ +A+ P+ R DAS D+ S G + T +S S R+T +R+ P PV R E G RAVEA+GLIW+D+ Q TAYSVRHGYRI+VQGAQDS+SG EYGRIL+Q+RG + D G+ AAA +R++Y E E Q +L+DVPE D FS WA +ED MT+ QWQPLR+ D + A EQPDRVVFVED+RP L LSH AS TLV +L+S GGLV PRS+VSHS K MSEAC A S GDGGL+GSLIS+VS+GLQAVW+AS +LPVSG VVRCTGRPGS LPP VV T ADQFLLLTD++V D SRQ F+RNVLHHL+RAP S +P +T+ S I LVQLQCTL++FEGYLASAAGA G + AP +T +G +D +++GHEARKVAKSLLEASQASATDLRLWSSYVQLLA+LG+ EAIKVAEKALS+V+ALPE KK SAE+FW+ FRLHAGLPL+PRDPH GE+ E + NLF N+ RNG R+MALL+LCSFAEG F R K K K+ KRD K E +I+PPRL+AARKLMADRVAR A+Q Q D LDMTPPFMYH++AWVWME++S G A+ AMS+CL + + + + G +GNKPY W+VV + TALGVCLERMHR FSEL+ LAQR++PV GPRRVR VLLRGL S PAEPGMLC+L+ TEQ S SQQRLVHHL E S +RAL WEQGPTP EWILS THQVMRCV EAR +A +E + S R D AL VK WLPGSY+RL+RSME A+TH TGR + +LWRMYM AMRGN QAKQLFWRA+HACPGNKA+WMD+LRG +R +G+ GLRPAFR KEL E DA+LEKSLH+RAEP
Sbjct: 160 RRGDPDNMSFGKFYRLDVPLYDGMNDAAGSR-------KSRRKVARYFGSHVRGASAIDHQEHLQLWKGDKRRDHTLAWTQAIS-------SRTLSRDGTIPTFGGM------------EHNEQRVSTDFLPVTPVVAPVN-ERATNGMTAEHDGVHTL-------SLEQWVARKTKEFNLATRERPQSDDIWLQYADFQEDAVRALHGG-HTLQPPTAAIVRMTLEKRSSVLERALRQNPFSVRLWIPQLHLAAQMQEHVVVDSLWRAAIEKSSQSCTLWLRYLQFKASHFASFSVTNQRSIYARCIRALESKREEANKAHEQDQRAKGVFIMANKSILEGESKETAAAERNLLDALWNYCVFERASGYHERALGVLQAMVELNTASAT--LSLDTFVSFWDSEAPRIGDVHPTQAGMTRWLE-----------------TAGTASSKPSGSALQTGQQKTVAPRKHGTARTIAVRGKRKRAVDFFKEDLPA-----------------------------ETFEQPKATGGTEVLEKAYQKAQAMA------------MAAVPILRMDASPHADS------------SSDGDAKNASGQRRQSGTSREGLSEPESTRRDTADRKGSSPEVTAPDTVGEHSSPVQR-----------ETEPEG------VRAVEAEGLIWLDDEQRTAYSVRHGYRIDVQGAQDSVSGHEYGRILSQMRGGSALDEDGDRNVEVAAAASKRLQYRGARERDAEVAKQSAVLQDVPEGDVFSEWAKAEDEMTQRQWQPLRSIQDAERAEEQPDRVVFVEDLRPFLFRLSHAASKSTLVGLLLSAGGLVHPRSDVSHSPKLMSEACCAGSFGDGGLSGSLISSVSNGLQAVWRASEGDLPVSGTGVVRCTGRPGSCLPPAVVSTAADQFLLLTDDVVADCSRQAFLRNVLHHLVRAPAS------LPSTTSGSNI-------LVQLQCTLIMFEGYLASAAGARHGRFSAGSAPKQTRPTGQGAP-WSDEDTHGHEARKVAKSLLEASQASATDLRLWSSYVQLLALLGSTQEAIKVAEKALSMVQALPEDKKGFSAELFWLTFRLHAGLPLSPRDPHPGEDD-------ETVGNLFETGNKGRNG-REMALLMLCSFAEGGFKRPKSKSKRSKRDGKGSSAEPILITPPRLLAARKLMADRVAREAAQEVQRDADVADGA------LDMTPPFMYHAIAWVWMEFISVGLGAAQDAMSKCLELAQPSXXXXXXXXXXXXXXXXXXXXXXXXKFGIGGTSTGNKPYTWNVVPEHTALGVCLERMHRGFSELMTLAQRYNPVDAGPRRVRAVLLRGLVSFPAEPGMLCLLLDTEQLSSSQQRLVHHLFEVSR------RRALLWEQGPTPLEWILSTTHQVMRCVREARQTMIAAGGTVEHVDATSPAYRRHN--------DEALRVKNWLPGSYSRLKRSMESAITHPTGRGIPVLWRMYML--AMRGNFLQAKQLFWRAVHACPGNKAVWMDALRGSRRDRVGAAGLRPAFRTKELNEAIDALLEKSLHLRAEP 1555
BLAST of mRNA_P-canaliculata_contig1003.85.1 vs. uniprot
Match: D7FJJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJJ5_ECTSI) HSP 1 Score: 1001 bits (2588), Expect = 0.000e+0 Identity = 597/1101 (54.22%), Postives = 718/1101 (65.21%), Query Frame = 1 Query: 1390 RKLPVVKALDARGKRKRAVDFFSEDAPAPGVPTPGGQGERHTPLWRMRTGLSNPSKGDSDERVGVTYVEDVLEKAYQAAEALSSKTTAFQSADGDLASSPLSRDASRGFDTDGEDAPDRAPLESVVGPENRLMREETMDDTGGLSISSISSKTRNTRERQLIEEIRQGPIAPTMQGEPVPRGKPGPAPQDEARDERRGGNDGHCARAVEADGLIWVDESQATAYSVRHGYRINVQGAQDSMSGLEYGRILNQVRGDAKDDRGGNATT---AAARERIRYE-------EMAKEATVQEDMLEDVPESDPFSSWATSEDRMTREQWQPLRATVDEDGAAEQPDRVVFVEDIRPLLSTLSHPASLGTLVNMLVSVGGLVFPRSNVSHSHKFMSEACSAASLGDGGLAGSLISAVSDGLQAVWKASGAELPVSGRSVVRCTGRPGS-LPPPVVCTTADQFLLLTDELVGDVSRQKFMRNVLHHLIRAPQSSPRPSPIPGSTNSSGIWSDCGDMLVQLQCTLVLFEGYLASAAGAYSGHYGRAGAPGKTSIGSKGGKTLADNESYGHEARKVAKSLLEASQASATDLRLWSSYVQLLAILGNRDEAIKVAEKALSLVEALPESKKSLSAEMFWIAFRLHAGLPLNPRDPHAGEEIPSNGTGLELLANLFNR-NETRNGKRQMALLLLCSFAEGRFDRSK-KPKKLKRDDK--DPEDGVISPPRLMAARKLMADRVARLASQ-LPQGKTDGVSSLPQCHSLLDMTPPFMYHSVAWVWMEYLSRGPDEAEHAMSECLAMVKVKMNATNATQTNDSADDDHFPGSRGLELRGAVSGNKPYEWDVVLDGTALGVCLERMHRSFSELVMLAQRFDPVKTGPRRVRMVLLRGLQSCPAEPGMLCMLMATEQFSGSQQRLVHHLSEASAPEAPYIQRALDWEQGPTPFEWILSATHQVMRCVHEARHVFVAPEAAMEKGGSASNESTRKTVGEEKGGRDRALCVKKWLPGSYARLRRSMEKAVTHATGRQMTLLWRMYMSLEAMRGNHKQAKQLFWRAIHACPGNKALWMDSLRGDQRAHIGSLGLRPAFRAKELQEISDAMLEKSLHVRAEP 4644
RK + + RGKRKRAVDFF ED PA ++ E+ T +VLEKAYQ A+A++ D P S D ++ + G+ E + GPE+ T DT G + SS T L GP+ + E ARAVEA+GLIW+D+ Q TAYSVRHGYRI+VQGAQDS+SG EYGRIL+Q+RG + G+ AAA +R+RY EMAK+A V L+DVPE D FS WA +ED MT+ QWQPLR+ D + A EQPDRVVF+ED+RP L LSH AS+ TLV +L+SVGGLV PRS+VSHS K MSEAC A S GDGGL+GSLIS+V++GLQAVW+AS +LPVSG VV CTGRPGS LPP VV T ADQFLLLTD++V D SRQ F+RNVLHHL+RAP S +P +T+ S I LVQLQCTL++FEGYLASA+GA G + AP +T ++ G +D +++GHEARKVAKSLLEASQASATDLRLWSSYVQLLA+LG+ EAIKVAEKALS+V+ALPE KK SAE+FW+ FRLHAGLPL+PRDPH GE+ E + NLF N+ R+G R+MALL+LCSFAEG F R K K K+ KRD K E +I+PPRL+AARKLMADRVAR A+Q + + DG LDMTPPFMYH++AWVWME+LS G D AE AMS+CL + + T + + + A + + G+ G +GNKPY W+VV + TALGVCLERMHR FSEL+ LAQR++PV GPRRVR VLLRGL S PAEPGMLC+L+ TEQ S SQQRLVHHL E S +RAL WEQGPTP EWILS THQVMRCV EAR +A +E + + R D AL VK WLPGSY+RL+RSME A+TH TGR M +LWRMYMS+EAMRGN QAKQLFWRA+HACPGNKA+WMD+LRG QR +G GLRPAFR KEL E DA+LEKSLH+RAEP
Sbjct: 31 RKHGTARTIAVRGKRKRAVDFFKEDLPA-----------------------------ETFEQPKATGGTEVLEKAYQKAQAMAMAAVPILRTDASPHVDPSSDDDAK--NDSGQRPQSGTSREGLSGPES------TQKDTAGGNGSSSEVTASGTVGEHL------GPVQRETETE--------------------------GARAVEAEGLIWLDDEQRTAYSVRHGYRIDVQGAQDSVSGHEYGRILSQMRGGSALGEDGDRNVEVAAAASKRLRYRGARERDAEMAKQAAV----LQDVPEGDVFSEWAKAEDEMTQRQWQPLRSIQDAERAEEQPDRVVFIEDLRPFLFRLSHAASISTLVGLLLSVGGLVHPRSDVSHSPKLMSEACRAGSFGDGGLSGSLISSVNNGLQAVWRASEGDLPVSGSGVVGCTGRPGSCLPPAVVSTAADQFLLLTDDVVADCSRQAFLRNVLHHLVRAPAS------LPSTTSGSNI-------LVQLQCTLIMFEGYLASASGARHGRFSAGSAPKQTRP-TQQGAAWSDEDTHGHEARKVAKSLLEASQASATDLRLWSSYVQLLALLGSTQEAIKVAEKALSMVQALPEDKKGFSAELFWLTFRLHAGLPLSPRDPHPGEDD-------ETVGNLFETGNKGRHG-REMALLMLCSFAEGGFKRPKSKSKRSKRDGKGSSAESILITPPRLLAARKLMADRVAREAAQEVQRDVADGA---------LDMTPPFMYHAIAWVWMEFLSVGLDAAEDAMSKCLGLAQPSTTPTGSGEASGVAAESSSSSNFGIG--GTSTGNKPYIWNVVPEHTALGVCLERMHRGFSELMTLAQRYNPVDAGPRRVRAVLLRGLVSFPAEPGMLCLLLDTEQLSSSQQRLVHHLFEVSR------RRALLWEQGPTPLEWILSTTHQVMRCVREARQTMIAAGGTVEHVDATAPAYRRHN--------DEALRVKNWLPGSYSRLKRSMESAITHPTGRGMPVLWRMYMSMEAMRGNFLQAKQLFWRAVHACPGNKAVWMDALRGSQRDRVGEAGLRPAFRTKELNEAIDALLEKSLHLRAEP 1011
BLAST of mRNA_P-canaliculata_contig1003.85.1 vs. uniprot
Match: A0A835ZIY3_9STRA (NRDE-2, necessary for RNA interference-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIY3_9STRA) HSP 1 Score: 448 bits (1152), Expect = 2.020e-127 Identity = 478/1631 (29.31%), Postives = 670/1631 (41.08%), Query Frame = 1 Query: 1 RQGDQDNISFEGFYRTDVPIYHGMKNFARNEGGRRAGEKGRAPLIRYFSRQARGSISD-ERVARVQLWRGIKRQRHRLALETNTADVGGGKGTHTEGDSSSMPPSAILPLQAKHDPSARSRSQEQSPGADFLPVDPTVVAISPSNEDTGTLKGGDPAHTLDVGAPTESLEQWVTRRTKEFNRLTREQPKSENLWLKFADFQEEAV--------------RAIQGGGEFVRSPSSAVVHTTLEKRASVLEGALRRNPTSVKLRKAQL---HVAGQLHEHDAVDSLWKKAIEKSNHSLALWLRYLHFKAGHFASFSVEEQRSTFSLCIEALECRRREARQAREKDEKARGVFIMGDRSMLEDGKEHVRAEKELLDVLWSYCVMERAAGYHERALGALQAMVELNITS-----RDKPVSVDDLEAFWESEFPRIGDAHPSMAGISQWREASLTRNDSKNDRSRQEATSSTNVSSASIVQVPSGERAAVGRKLPVVKALDARGKRKRAVDFFSEDAPAPGVPTPGGQGERHTPLWRMRTGLSNPSKGDSDERVGVTYVEDVLEKAYQAAEALSSKTTAFQSADGDLASSPLSRDASRGFDTDGEDAPDRAPLESVVGPENRL----MREETMDDTGGLSISSISSKTRNTRERQLIEEIRQGPIAPTMQGEPVPRGKPGPAPQDEARDERRGGNDGHCARAVEADGLIWVDESQATAYSVRHGYRINVQGAQDSMSGL------EYGRILNQVRGDAKDDRGGNATTAAA----------------RERIRYEEMAKEATVQEDMLEDVPESDPFSSWATSEDRMTREQWQPLRATVDEDGAAEQPDRVVFVEDIRPLLSTL-----SHPASLGTLVNMLVSVGGLVFPRSNVSHSHKFMSEACSAASLGDGGLAGSLISAVSDGLQAVWKASGAELPVSGRSVVRCTGRPGSLPPPVVCTTADQFLLLTDELVGDVSRQKFMRNVLHHLIRAPQSSPRPSPIPGSTNSSGIWSDCGDMLVQLQCTLVLFEGYLASAAGAYSGHYGRAGAPGKTSIGSKGGKTLADNESYGHEARKVAKSLLEASQASATDLRLWSSYVQLLAILGNRDEAIKVAEKALSLVEALPESKKSLSAEMFWIAFRLHAGLPLN--------------PRDPHAGEEIPSNGTGLELLANLFNRNETRNGK-RQMALLLLCSFAEGRFDR------SKKPKKLKRDDKDPEDGVISPPRLMAARKLMADRVARLASQLPQGKTDGVSSLPQCHSLLDMTPPFMYHSVAWVWMEYLSRGPDEAEHAMSECLAMVKVKMNATNATQTNDSADDDHFPGSRGLELRGAVSGNKPYEWDVVLDGTALGVCLERMHRSFSELVMLAQRFDPVKTGPRRVRMVLLRGLQSCPAEPGMLCMLMATEQFSGSQQRLVHHLSEASAP------EAPYIQRALDWEQGPTPFEWILSATHQVMRCVHEAR--HVFVAPEAAMEKGGSASNESTRKTVGEEKGGRDRALCVKKWLPGSYARLRRSMEKAVTHATGRQMTLLWRMYMSLEAMRGNHKQAKQLFWRAIHACPGNKALWMDSLRGDQRAHIGSLGLRPAFRAKELQEISDAMLEKSLHVRAEP 4644
++ D+D + + G Y+ DVP Y M +R +A + RA RY+S + R + + V LWR QR + AD GGG G F+P+ PT A+ + D T G + E+ + +RTKEFN TR +P +LWL +ADFQ+ A R + G F + E+R VLE ALR N ++ LR AQ VAG E ++ L+++A+ + W + F AG FA+F+V +QR + +EA AR G R D + E L+D L+ C+ E AAGY ERALGALQA VELN++ + ++ DL AFW++E PRIGDA PS AG++ W +Q GE AV V R+RA FF+E QGER + G++ GD + V + LE AY++A L ++ L+ R E+A A LE+ G E L + E + D + + ++ G E+ + RR R +A+GLI V+E TAYS+ HGYRI+++ A + +G EY RIL +RGDA R+R R EE+A+EA L V + D F++WA E+R+ QW PLRA A PDRVVF EDI PL L S PA L L + G + PR+ SH+ ++ A +L D ++ GL SG + V G + P SLP V Q + + LV D +RQ F+RN L+ L+ +P S P D+ V LQC +L EG L A + G G A AP A + + R A+SLL+AS+ASATDLRLW +YV+L LG A++ A +AL+ VEALP +++ + +FW AFRL AGLPL+ P+ P AG S G EL + T +G R AL LL S AEG +++ + + RL+ AR+L A+ + R A L LD TPPF Y++ A W++ + G A AM L + V NA Q +A P SR ++G PYEW + D A V ER H + E + A PR R + RGL S PA P +LC EQ + + R+ HH+ EAS +A + +R DW+ G P EW+L +++ C A H+ A AA + W +RLRR+ E A HA+GR++ L WR++M+ E H +AK+L RAIHACPG +ALW+D+ R LR FRA EL ++ D M EK L +R P
Sbjct: 351 KRRDKDMLRYGGVYKGDVPAYVSMVAPSRRRRATQADDD-RAKAARYYSLEVRAATRKASKKGLVPLWRWRNVQR-----AASGADTGGGX-----------------------------XXXXXXXGGAFIPLPPTEEAVPEAGSDDETGVAG-------------TAERVIMQRTKEFNERTRARPHDVDLWLAYADFQDAAXXXXXXXXRGASSAWRRVGALGGF---SDAXXXXXXAERRLGVLERALRANEGALALRLAQAAAAEVAGASAE--VLERLYRRAVARCADHPGAWRALVAFSAGRFAAFAVADQRELAAAALEA--------------HADARDAAAGGGRGADADAR-----EAALVDALYEACLAEAAAGYGERALGALQAAVELNVSGGGXXGAEAVATIGDLAAFWDAEVPRIGDAAPSAAGMALW------------------------------LQERRGESCAVVAGGGVAAPRQRSRWRQRAAAFFAEL-----------QGERSEAVQVAAGGVAEGGGGD-EGGVKASEAAQHLEAAYRSA----------------LEATQLAERRER------EEAR-AAALEAYEGDERTLADLIVAEWSDADDSAAAEAEAAAXXXXXXXXXXXXXXXFGR---------------------ESEEARR--------RRYDAEGLISVNEKDQTAYSLEHGYRISLRDAAAAGAGAPAQTTREYRRILAHMRGDASGXXXXXXXXXXXXXXXXXXXXXXXXXXFRDR-RAEELAREAQA----LVPVADDDAFAAWAQREERLAAAQWAPLRAAAAPAAAEAAPDRVVFWEDIAPLAFALRAPPASAPARAALLARFLAAAG-VHCPRAAPSHAAAALALAARCEALSDYPAC-----LLAGGLGLAEACSGWDASVIGGTAAAAAAPP-SLPLQAVLAAQQQLVWVEPRLVHDAARQTFVRNALYSLV-SPSLSLDP-----------------DLRVDLQCCTLLLEGALLRARRSGGGSVGAA-AP------------SAGDAAAAEAVRGAARSLLQASEASATDLRLWCAYVELEDALGAPATALRAARRALASVEALPPAQRRHAPALFWAAFRLTAGLPLSAAXXXXXXXXXXXTPQAP-AGSNA-SGGCVAELCS------PTGSGAARDAALHLLLSMAEGSYEKPPAVAAAAALQXXXXXXXXXXXXXXXXXRLVRARRLFAEHLTREAEALRSAXXXXXXXXG-----LDATPPFFYYAAALTWLQLATDGALAAAAAMQSALLQLLVGQTPANAPQDAPAAAA-RTPTSRSPHVQGLG----PYEWQLASDAGARAVAAERCHLALCEALAAAAAAGDA-AAPRAERAAVARGLLSFPASPALLCAFALGEQHARAAGRVRHHMMEASPSPLRRCRQALHCRRRADWQTGALPLEWLLWIGYELRSCARAAAPGHLADAHAAAXXXXXXXXXXXXXWRAPPD------------WSAAEQSRLRRAFEGAAAHASGRRLALPWRLHMAFERAARCHARAKRLHIRAIHACPGARALWLDAARRG--------ALRGVFRAAELSDLVDVMAEKELRLRCAP 1733
BLAST of mRNA_P-canaliculata_contig1003.85.1 vs. uniprot
Match: D7FJJ4_ECTSI (Similar to Uncharacterized protein C14orf102 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJJ4_ECTSI) HSP 1 Score: 251 bits (642), Expect = 6.960e-72 Identity = 133/233 (57.08%), Postives = 170/233 (72.96%), Query Frame = 1 Query: 478 DVGAPTESLEQWVTRRTKEFNRLTREQPKSENLWLKFADFQEEAVRAIQGGGEFVRSPSSAVVHTTLEKRASVLEGALRRNPTSVKLRKAQLHVAGQLHEHDAVDSLWKKAIEKSNHSLALWLRYLHFKAGHFASFSVEEQRSTFSLCIEALECRRREARQAREKDEKARGVFIMGDRSMLE-DGKEHVRAEKELLDVLWSYCVMERAAGYHERALGALQAMVELNITSRDKP 1173
D TESLEQWV R+TKEFN TRE+P+S+++WL++AD+QE+AVRA+ GG ++ P++A+V LEKRASVLEGALR+NP SV+LR QLH+A Q+ EH VDSLW+ AIEKS+ S LWLRYL FKA HFASFSV QRS ++ C+ ALE +R EA +A E+D +A+GVFIM ++SMLE + KE AE+ LLD LW+YCV ERA+G L L +IT R P
Sbjct: 39 DAAGQTESLEQWVARKTKEFNLATRERPESDDIWLQYADYQEDAVRALHGG-HTLQPPTAAIVRMILEKRASVLEGALRQNPFSVRLRIPQLHLAAQMQEHVVVDSLWRAAIEKSSQSCTLWLRYLQFKASHFASFSVTSQRSFYARCVRALESKREEAMRAHEQDRRAKGVFIMANKSMLEGESKETAAAERNLLDALWNYCVFERASGC---VLSYLYCPSRTSITVRSSP 267
BLAST of mRNA_P-canaliculata_contig1003.85.1 vs. uniprot
Match: A0A7S4CRZ7_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CRZ7_9EUGL) HSP 1 Score: 117 bits (292), Expect = 4.480e-23 Identity = 86/254 (33.86%), Postives = 135/254 (53.15%), Query Frame = 1 Query: 496 ESLEQWVTRRTKEFNRLTREQPKSENLWLKFADFQEEAVRAIQGGGEFVRSPSSAVVHTTLEKRASVLEGALRRNPTSVKLRKAQLHVAGQLHEHDAVDSLWKKAIEKSNHSLALWLRYLHFKAGHFASFSVEEQRSTFSLCIEALECRRREARQAREKDEKARGVFIMGDRSMLE-DGK----EHVRAEKELLDVLWSYCVMERAAGYHERALGALQAMVELNITSRDKPVSVDD----LEAFWESEFPRIGD 1230
ES + ++ +T E+N R +PK + LWL + FQ++A + GG+ VR A+V EK+ +VLE A NP S L A L +A + V+ LW + + + HS LWL+++ ++ F+ +S +E R +S + + RR+ + RE + A+G D+ LE +G + V E+ LL VL E+ AGYHERALG LQA+VE N ++ + D+ FW+SE PR+G+
Sbjct: 174 ESFQDYIQFKTGEYNTKLRMRPKDQQLWLDYVAFQDQAHGNV--GGKQVRK---AIV----EKKLAVLEKATEANPQSEALWSAYLAMASETLPPGDVEDLWDQTLRRIPHSARLWLQFIAWRRSVFSMYSPQEIRFLYSKTVGRVVALRRKTVRDRE-ELAAQGADSDDDKDNLEAEGAKLDAQIVECEETLLRVLSEAVEYEQGAGYHERALGILQAVVEYNCFVQEDIIDTDEHLRRFRQFWDSEVPRVGE 417
BLAST of mRNA_P-canaliculata_contig1003.85.1 vs. uniprot
Match: A0A2R6W2R1_MARPO (Uncharacterized protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W2R1_MARPO) HSP 1 Score: 114 bits (285), Expect = 1.180e-21 Identity = 79/261 (30.27%), Postives = 129/261 (49.43%), Query Frame = 1 Query: 466 AHTLDVGAPTESLEQWVTRRTKEFNRLTREQPKSENLWLKFADFQEEAVRAIQGGGEFVRSPSSAVVHTTLEKRASVLEGALRRNPTSVKLRKAQLHVAGQLHEHDAVDSLWKKAIEKSNHSLALWLRYLHFKAGHFASFSVEEQRSTFSLCIEALECRRREARQAREKDEKARGVFIMGDRSMLEDGKEHVRAEKELLDVLWSYCVMERAAGYHERALGALQAMVELNITSRDKPVSVDD------LEAFWESEFPRIGD 1230
A +D G E+ +++VTR+TKE+N RE+ + E+LW+ FA+FQ+E ++A + AVV +EK+ ++LE AL P S L L + A+ S W+ A+ + + S +W +L F+ F++FSV R+ + ++L R A+G+ ED +V AE+ L+ + C AG+HE A+G QA +E ++ S P+ + + EAFW S PRIG+
Sbjct: 327 AEDVDAG---ETWQEYVTRKTKEYNEQIRERSRDESLWISFANFQDELIQATE---------KKAVVQQAVEKKVAILEKALHILPDSEDLLLLYLESCQRRDTAAALVSKWEDAVSRHSSSFRMWREFLRFRCSQFSAFSVSSLRALYIRAFQSLVASRNRLH--------AKGL------GRGEDDVNYVEAEQGLVSIFVDLCRFNWQAGHHELAVGLFQAGIEYSLFS--PPIQLTESNKLRLFEAFWSSGAPRIGE 559
BLAST of mRNA_P-canaliculata_contig1003.85.1 vs. uniprot
Match: UPI001CB98131 (nuclear exosome regulator NRDE2 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB98131) HSP 1 Score: 112 bits (279), Expect = 5.820e-21 Identity = 89/307 (28.99%), Postives = 141/307 (45.93%), Query Frame = 1 Query: 358 RSQEQSPGADFLPVDPTVVAISPSNEDTGTLKGGDPAHTLDVGAPTESLEQWVTRRTKEFNRLTREQPKSENLWLKFADFQEEAVRAIQGGGEFVRSPSSAVVHTTLEKRASVLEGALRRNPTSVKLRKAQLHVAGQLHEHDAVDSLWKKAIEKSNHSLALWLRYLHFKAGHFASFSVEEQRSTFSLCIEALECR-RREARQAREKDEKARGVFIMGDRSMLEDGKEHVRAEKELLDVLWSYCVMERAAGYHERALGALQAMVELNITSRDKPVSVDD----LEAFWESEFPRIGDAHPSMAGISQW 1263
+ +Q G DF+P+ +++T ++G D+ ES E V R+TKEFN++TRE P +EN WL+FA+FQ++ + G ++ TLEK+ S+LE A NP + +L A ++ + +D + + W+K + + S LW +L G F+ F V E R F+ I+AL ++ RQAR+ D + + V+ E L+ + S C E +GY E A QA++E + +S E FW S RIG+ G S W
Sbjct: 250 KGSQQEIGTDFIPL----------SDETTPVEG----QPKDLSVVEESWEDEVLRKTKEFNKMTREHPYNENFWLEFANFQDKVESKQRQRGARLQ---------TLEKKISILEKASELNPDNEELLLALMNAYQRRDNNDVLIARWEKLLTYHSGSYKLWREFLRLVQGDFSRFKVSEVRKMFANGIQALSAACNKQHRQARQNDRSSPDPLL-------------VQQELGLVSIFVSLCRFEWQSGYQELATALFQAVLEYTLFCPSLLLSEQSKQRLFEYFWNSIGARIGE--DGALGWSNW 518
BLAST of mRNA_P-canaliculata_contig1003.85.1 vs. uniprot
Match: A0A2G5F714_AQUCA (Uncharacterized protein n=2 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5F714_AQUCA) HSP 1 Score: 111 bits (277), Expect = 9.390e-21 Identity = 80/264 (30.30%), Postives = 121/264 (45.83%), Query Frame = 1 Query: 496 ESLEQWVTRRTKEFNRLTREQPKSENLWLKFADFQEEAVRAIQGGGEFVRSPSSAVVHTTLEKRASVLEGALRRNPTSVKLRKAQLHVAGQLHEHDAVDSLWKKAIEKSNHSLALWLRYLHFKAGHFASFSVEEQRSTFSLCIEAL--ECRRREARQAREKDEKARGVFIMGDRSMLEDGKEHVRAEKELLDVLWSYCVMERAAGYHERALGALQAMVELNITSRDKPVSVDD----LEAFWESEFPRIGDAHPSMAGISQWRE 1269
ES E+ V RRT++FN+++RE P E +WL FA+FQE+ + P A TLEK+ S+LE A NP S +L + D + W+K + + + S LW +LH G F+ F V E R ++ I+AL C + R+ + A+ + + G + V+ E L+D S C ER +GYHE A QA +E ++ ++ E FW R+G+ G S W E
Sbjct: 191 ESWEEEVLRRTRDFNKMSRESPHDEQVWLAFAEFQEKIAS---------KQPQKAARLQTLEKKISILERATELNPDSEELLLCLMKACQCRDSKDVLIERWEKILVQRSASFKLWREFLHVIQGDFSKFKVSEVRKMYAHAIQALASSC----GKLTRQDHQTAKPILL---------GNDIVQLELGLVDTFVSLCRFERQSGYHELATALFQAEIEFSLFCPSLLLTEQSKLRLFEHFWTGNGARVGE--DGALGWSVWLE 430
BLAST of mRNA_P-canaliculata_contig1003.85.1 vs. uniprot
Match: A0A251VKK6_HELAN (Uncharacterized protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251VKK6_HELAN) HSP 1 Score: 111 bits (277), Expect = 9.930e-21 Identity = 97/325 (29.85%), Postives = 152/325 (46.77%), Query Frame = 1 Query: 409 VVAISPSNEDTGT--LKGGDPAHTLDVGAPT------ESLEQWVTRRTKEFNRLTREQPKSENLWLKFADFQEEAVRAIQGGGEFVRSPSSAVVHTTLEKRASVLEGALRRNPTSVKLRKAQLHVAGQLHEHDAVDSLWKKAIEKSNHSLALWLRYLHFKAGHFASFSVEEQRSTFSLCIEALECR-RREARQAREKDEKARGVFIMGDRSMLEDGKEHVRAEKELLDVLWSYCVMERAAGYHERALGALQAMVELNITSRDKPVSVDD----LEAFWESEFPRIGD--AHPSMAGISQWREASLTRNDSKNDRSRQEATSSTNV 1338
+VA S++ T T + D ++D G PT ES E V R+TK FN++TREQP ++ +WL+FA+FQ++ R P TLEK+ S+LE A+ NP + +L A ++ + +D + W+K + + + S LW +L F G F+ F V E R F+ I+AL + RQA++ D+ + + V+ E L++ S C E +GY E A QA +E ++ +S E FW S RIG+ AH G W L + + + ++ E+ SS NV
Sbjct: 242 IVAPKDSSQQTATDFIPLSDETASID-GQPTNSSIVEESWEDEVLRKTKHFNKMTREQPYNDKIWLEFAEFQDKVES---------RQPQRGARLQTLEKKISILEKAVELNPDNEELLLALMNAYQRRDNNDVLIGRWEKLLTRHSGSYKLWREFLRFVQGDFSRFKVSEVRKMFANAIQALSAACSKHHRQAQQNDKSSADPLL-------------VQQELGLVNTFVSLCRFEWNSGYQELATALFQAEIEYSLFCPSLLLSEHGKQRLFEYFWNSTGARIGEDGAH----GWLNW----LEKEEEQRQKAMIESESSANV 535
BLAST of mRNA_P-canaliculata_contig1003.85.1 vs. uniprot
Match: UPI0010A4C192 (protein NRDE2 homolog n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A4C192) HSP 1 Score: 111 bits (277), Expect = 1.000e-20 Identity = 89/270 (32.96%), Postives = 125/270 (46.30%), Query Frame = 1 Query: 481 VGAPTESLEQWVTRRTKEFNRLTREQPKSENLWLKFADFQEEAVRAIQGGGEFVRSPSSAVVHTTLEKRASVLEGALRRNPTSVKLRKAQLHVAGQLHEHDAVDSLWKKAIEKSNHSLALWLRYLHFKAGHFASFSVEEQRSTFSLCIEALECRRREARQAREKDEKARGVFIMGDRSMLEDGKEHVRAEKELLDVLWSYCVMERAAGYHERALGALQAMVE-------LNITSRDKPVSVDDLEAFWESEFPRIGDAHPSMAGISQWRE 1269
A ES E + R+T+EFN+LTRE+P EN+WL FA+FQ++ + G ++ TLEK+ S+LE A+ NP + +L L D + W+K + + + S LW +LH F+ F V E R F+ IEAL R + R V D S L+ G V+ E L+D+ S C E AGY E A QA +E L++T + K E FW SE R+G+ G S W E
Sbjct: 282 ASALEESWEDEMFRKTREFNKLTRERPHDENVWLAFAEFQDKVAGMQRQKGARLQ---------TLEKKISILEKAIDLNPDNEELLLCLLKAYQMRDSSDILIGRWEKILLQHSGSYKLWTEFLHVVQRDFSRFKVSEIRKMFAHAIEALSASR---------SKNFRQVHQAADPSSLDPGI--VQLELGLVDIFVSLCRFEWQAGYRELATALFQAEIEFSLFCPPLHLTEQGKQRL---FEHFWNSEGERVGEE--GALGWSTWLE 526 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig1003.85.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig1003.85.1 >prot_P-canaliculata_contig1003.85.1 ID=prot_P-canaliculata_contig1003.85.1|Name=mRNA_P-canaliculata_contig1003.85.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=1527bp MKNFARNEGGRRAGEKGRAPLIRYFSRQARGSISDERVARVQLWRGIKRQback to top mRNA from alignment at P-canaliculata_contig1003:4428..16609+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig1003.85.1 ID=mRNA_P-canaliculata_contig1003.85.1|Name=mRNA_P-canaliculata_contig1003.85.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=12182bp|location=Sequence derived from alignment at P-canaliculata_contig1003:4428..16609+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig1003:4428..16609+ >mRNA_P-canaliculata_contig1003.85.1 ID=mRNA_P-canaliculata_contig1003.85.1|Name=mRNA_P-canaliculata_contig1003.85.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=9162bp|location=Sequence derived from alignment at P-canaliculata_contig1003:4428..16609+ (Pelvetia canaliculata dioecious)back to top |