mRNA_P-canaliculata_contig10029.82.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig10029.82.1
Unique NamemRNA_P-canaliculata_contig10029.82.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig10029.82.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI)

HSP 1 Score: 424 bits (1091), Expect = 2.000e-143
Identity = 227/392 (57.91%), Postives = 284/392 (72.45%), Query Frame = 1
Query:   85 GAAVAFVIVVLXXXVFVLADLVRVVNSSKTVRGKLERRVL-MFRDRLVKALPLTAIKTIVVTWQIITQFSAVVTVEYPTVYENFLAVLNLINLNLGFILSFSCVVETDFYTHLVLATIFPLAMLMALVMTRFIARKRNGHSLEALRAVENKHISVALFLLFMVYSSVSYIIFQTFVCDTLDDEVSYLRADYSLVCSTSAHTAFKVYAGFMMLVYPIGIPAAFAWWLASNRHHLMRADPNGGPQLNA-----IEPMRALWAPYKPKRYYYEVIECIRRIALTGLAVFIYPGSAAQVALEALFAVVFNAIFEMQCPFINPLDKWLYRSGTWVIYFSMYLALLLKVDVSDNDSSSQDVFAGLLIAAHSVMILVVVVNGVLSGIEGFQKVVEQDIP 1242
            G A+AF++VV      V+A+LVRVV+   T       + L   R+R+   +PLT+IK ++V WQI+TQFS+VV V YP VYE FL++LNL+N N GFILS SCVV+T+FY  L+ ATI PL +L AL +T  ++R RN HS   ++  ++KH+S+ALF++F+VYSSVS+ IFQTFVC+TLDD V YLRADYSLVCST  HTA KVYAG M+ VYP GIPA F  WL SNRH L++ D NGG    A     ++PMR LWAPYKP+RYY+EV+EC RRIALTGLAVFIYPGSAAQVALE +FA  F  I ++  PF +PLD WLYRSG WVI+ SM+L LLLKVD SD DS SQ++FA LLI+AH  M+L + V  VLS       + +Q IP
Sbjct:    9 GIAIAFLLVVSGGVALVIANLVRVVDDDNTGTVSACGKTLNSLRNRIANGIPLTSIKIVLVAWQIVTQFSSVVNVVYPDVYEKFLSILNLVNFNFGFILSASCVVDTNFYGRLLFATIGPLVVLGALALTYAVSRSRNRHSPAGIQTAKHKHLSIALFIMFVVYSSVSFNIFQTFVCETLDDGVEYLRADYSLVCSTDTHTAMKVYAGLMIFVYPFGIPAFFTLWLVSNRHDLVKVDANGGSTATAKSLGNLQPMRDLWAPYKPRRYYFEVVECGRRIALTGLAVFIYPGSAAQVALEVVFAAFFIGISDVLSPFADPLDAWLYRSGAWVIFISMFLTLLLKVDASDEDSQSQELFAKLLISAHVGMVLAIAVQAVLSVKGSLVAMRDQPIP 400          
BLAST of mRNA_P-canaliculata_contig10029.82.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE)

HSP 1 Score: 439 bits (1130), Expect = 3.490e-141
Identity = 226/406 (55.67%), Postives = 297/406 (73.15%), Query Frame = 1
Query:    1 CAVCEKEYAPGFQYSCRSCEGLDKWSAMGAAVAFVIVVLXXXVFVLADLVRVVNSSKT-VRGKLERRVLMFRDRLVKALPLTAIKTIVVTWQIITQFSAVVTVEYPTVYENFLAVLNLINLNLGFILSFSCVVETDFYTHLVLATIFPLAMLMALVMTRFIARKRNGHSLEALRAVENKHISVALFLLFMVYSSVSYIIFQTFVCDTLDDEVSYLRADYSLVCSTSAHTAFKVYAGFMMLVYPIGIPAAFAWWLASNRHHLMRADPNGG-----PQLNAIEPMRALWAPYKPKRYYYEVIECIRRIALTGLAVFIYPGSAAQVALEALFAVVFNAIFEMQCPFINPLDKWLYRSGTWVIYFSMYLALLLKVDVSDNDSSSQDVFAGLLIAAHSVMILVVVVNGVLS 1200
            CAVC++ YA G+Q+SC  C+G +  SA+G +VA   V L     V+ADLVRVV+  +        +R+   RDR+VKA+PLT+IK +VV WQI+TQFS+VV V YP +YE+FLAVLN++N +LGF+LS SC+V+ +FY  L   T+ PL +   L  T  I+R RN HS   ++A ++KH+S+ALF+ F+VYSSVS+ IFQTFVC+TLDD V+YLRADYSL CST  HTA   YAG M+LVYP+GIP  ++WWL SNRH L++   +G      P+L+ ++PMR LW+ YKP+RYY+EV+EC RRIALTGLA F+ P SAAQVA+E + A +F A+ ++  PF +P D WLYR+G W+I+FSMYLALLLKVD SD DS SQ  FA +LIAAH  M+LVV+V  VLS
Sbjct:  657 CAVCDEGYASGYQFSCSICDGENLRSAIGTSVALFFVALVGIALVIADLVRVVDEVEPDTASTWGKRLTSCRDRIVKAVPLTSIKIVVVAWQIVTQFSSVVNVVYPDIYESFLAVLNVVNFDLGFLLSVSCIVDVNFYGRLFFTTVGPLVVFGGLAATYAISRSRNRHSPAGMQAAKSKHLSIALFISFVVYSSVSFNIFQTFVCETLDDGVTYLRADYSLTCSTGVHTAMMAYAGLMILVYPVGIPTVYSWWLLSNRHDLVKVGTSGNCLGGAPRLDHLQPMRDLWSSYKPRRYYFEVLECGRRIALTGLAAFLLPDSAAQVAIEVVLAAIFMAVSDVLSPFADPFDGWLYRTGAWIIFFSMYLALLLKVDASDEDSQSQAAFAKVLIAAHVGMVLVVLVQAVLS 1062          
BLAST of mRNA_P-canaliculata_contig10029.82.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE)

HSP 1 Score: 412 bits (1059), Expect = 1.540e-138
Identity = 218/378 (57.67%), Postives = 279/378 (73.81%), Query Frame = 1
Query:  133 VLADLVRVVNS---SKTVRGKLERRVLMFRDRLVKALPLTAIKTIVVTWQIITQFSAVVTVEYPTVYENFLAVLNLINLNLGFILSFSCVVETDFYTHLVLATIFPLAMLMALVMTRFIARKRNGHSLEALRAVENKHISVALFLLFMVYSSVSYIIFQTFVCDTLDDEVSYLRADYSLVCSTSAHTAFKVYAGFMMLVYPIGIPAAFAWWLASNRHHLMRADPNGGPQLNAIEPMRALWAPYKPKRYYYEVIECIRRIALTGLAVFIYPGSAAQVALEALFAVVFNAIFEMQCPFINPLDKWLYRSGTWVIYFSMYLALLLKVDVSDNDSSSQDVFAGLLIAAHSVMILVVVVNGVLS----GIEGFQKVVE-QDIP 1242
            V+ DLVRVV+    +K+  GK ER  L  RD +  A+PLTAIK I+V WQI+TQF++VV VEYP +YE FLA LNL+N NLG+ LSF C+VET+FY  L  +TI PLA+L  L     IA++ N HS   +R   +KH+S+ALF++F +YSSVS+ IFQTF+C+TLDDEV YLRADYSL CSTS HT  +VYAG M+LVYPIGIPA FAWWLASNR  L++    G      + PM+ LW PYKP+RY+YE++EC RRI LTGLAVF++PG+AAQVA+E  FA     +FE+  PF++P+D WLYRSG  V++FSMYLALLLKVD SD +S SQ VFA +L+AAH  M+L V+++ +LS    GIE  +K VE +D+P
Sbjct:    4 VIVDLVRVVDDGDGTKSRVGKWER-FLSCRDAIAAAIPLTAIKIILVVWQIVTQFASVVDVEYPEIYERFLAALNLVNFNLGYFLSFLCLVETNFYGRLAFSTIVPLAILGGLAAKHAIAKRNNRHSQVGMREATDKHLSIALFIVFAIYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLVQDRSGGTTTPENLRPMKDLWEPYKPRRYFYELVECGRRIVLTGLAVFLFPGTAAQVAIEVAFAAGLLVVFEVLAPFVDPMDAWLYRSGALVVFFSMYLALLLKVDASDENSESQQVFAAVLVAAHVSMVLAVLLSSLLSAKKVGIEAMRKQVEVRDVP 380          
BLAST of mRNA_P-canaliculata_contig10029.82.1 vs. uniprot
Match: D7FUB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB5_ECTSI)

HSP 1 Score: 382 bits (981), Expect = 3.600e-127
Identity = 195/330 (59.09%), Postives = 246/330 (74.55%), Query Frame = 1
Query:  268 WQIITQFSAVVTVEYPTVYENFLAVLNLINLNLGFILSFSCVVETDFYTHLVLATIFPLAMLMALVMTRFIARKRNGHSLEALRAVENKHISVALFLLFMVYSSVSYIIFQTFVCDTLDDEVSYLRADYSLVCSTSAHTAFKVYAGFMMLVYPIGIPAAFAWWLASNRHHLMRADPNGGPQLNAIEPMRALWAPYKPKRYYYEVIECIRRIALTGLAVFIYPGSAAQVALEALFAVVFNAIFEMQCPFINPLDKWLYRSGTWVIYFSMYLALLLKVDVSDNDSSSQDVFAGLLIAAHSVMILVVVVNGVLS----GIEGFQKVVE-QDIP 1242
            WQI+TQF++VV VEYP +YE FLA LNL+N NLGF LSF CVVET+FY  L  +T+ PLA+L  L  T  IA++ N HS   +R   +KH+S+ALF++F  YSSVS+ IFQTF+C+TLDDEV YLRADYSL CSTS HT  +VYAG M+LVYPIGIPA FAWWLASNR  L+R   +G      + PM+ LW PYKP+RY+YE++EC RRI LTGLAVF++PG+AAQVA+E  FA     +FE+  PF++P+D  LYRSG  V+++SMYLALLLKVD SD  S SQ VFA +L+AAH  M+L V++  +LS    GIE  +K VE +D+P
Sbjct:   29 WQIVTQFASVVDVEYPEIYERFLAALNLVNFNLGFFLSFLCVVETNFYGRLAFSTLLPLAILGGLAATHAIAKRNNRHSQVGMREATDKHLSIALFIVFATYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLVRERSSGTATPENLRPMKDLWEPYKPRRYFYELVECGRRIGLTGLAVFLFPGTAAQVAIEVAFAAGLLVVFEVLAPFVDPVDAGLYRSGALVVFYSMYLALLLKVDASDESSESQQVFAAVLVAAHVSMVLAVLLRSLLSAKKVGIEAMRKKVEIRDVP 358          
BLAST of mRNA_P-canaliculata_contig10029.82.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE)

HSP 1 Score: 393 bits (1009), Expect = 1.170e-119
Identity = 206/407 (50.61%), Postives = 279/407 (68.55%), Query Frame = 1
Query:    1 CAVCEKEYAPGFQYSCRSCEGLDKWSAMGAAVAFVIVVLXXXVFVLADLVRVVNSSKTVRGKL--------ERRVLMFRDRLVKALPLTAIKTIVVTWQIITQFSAVVTVEYPTVYENFLAVLNLINLNLGFILSFSCVVETDFYTHLVLATIFPLAMLMALVMTRFIARKRNGHSLEALRAVENKHISVALFLLFMVYSSVSYIIFQTFVCDTLDDEVSYLRADYSLVCSTSAHTAFKVYAGFMMLVYPIGIPAAFAWWLASNRHHLMRADPNGGPQLNAIEPMRALWAPYKPKRYYYEVIECIRRIALTGLAVFIYPGSAAQVALEALFAVVFNAIFEMQCPFINPLDKWLYRSGTWVIYFSMYLALLLKVDVSDNDSSSQDVFAGLLIAAHSVMILVVVVNGVL 1197
            CAVC   Y+PG+  +C+SC G  K SA+  A A  ++ L   + +++ LV VV      +            R     + R+ + +PLTA+K +VV WQI+TQ+S V  +EYP  Y++FL+V++++NL+LGFILSF+CV +T+FY  L++ATI P+ +L  L  T  +AR+RN H  EA+R V+ +H+SV LF++F++Y++VSY IF+TFVCDTLDD  SYLRADYSL C T  HTA++VYAG  +LVYP+GIP  F WWL  NRH L + D  G  +L    P   LW PYKP  YYYEV+EC RRIALTG AVFIYP S+AQVA+  L A VF  + E+  PF  P++ WLYR+G +V++ SMYLALLL+VDVSD    SQ+VF+G+++ AH  M LVVVV G+L
Sbjct:  611 CAVCAAGYSPGYSRTCKSCMGNSKKSALVFAAAIGLLALAAVMVLVSRLVSVVEVGPRQQXXXXXXGSKGWRRTCSALQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELKQEDREGQAELR---PAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQGLL 1014          
BLAST of mRNA_P-canaliculata_contig10029.82.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI)

HSP 1 Score: 391 bits (1005), Expect = 4.380e-119
Identity = 208/402 (51.74%), Postives = 279/402 (69.40%), Query Frame = 1
Query:    1 CAVCEKEYAPGFQYSCRSCEGLDKWSAMGAAVAFVIVVLXXXVFVLADLVRVVNSSKTVR--GKLERRVLM-FRDRLVKALPLTAIKTIVVTWQIITQFSAVVTVEYPTVYENFLAVLNLINLNLGFILSFSCVVETDFYTHLVLATIFPLAMLMALVMTRFIARKRNGHSLEALRAVENKHISVALFLLFMVYSSVSYIIFQTFVCDTLDDEVSYLRADYSLVCSTSAHTAFKVYAGFMMLVYPIGIPAAFAWWLASNRHHLMRADPNGGPQLNAIEPMRALWAPYKPKRYYYEVIECIRRIALTGLAVFIYPGSAAQVALEALFAVVFNAIFEMQCPFINPLDKWLYRSGTWVIYFSMYLALLLKVDVSDNDSSSQDVFAGLLIAAHSVMILVVVVNGVL 1197
            CAVC   Y+PG+  +C+SC G  K SA+  A A   + L   V +++ LV VV      +   K  RR    ++ R+ + +PLTA+K +VV WQI+TQ+S V  VEYP  Y++FL+V++++NL+LGFILSF+CV +T+FY  L++ATI P+ +L  L  T  +AR+RN H  EA+R V+ +H+SV LF++F++Y++VSY IF+TFVCDTLDD  SYLRADYSL C T  HTA++VYAG  +LVYP+GIP  F WWL  NRH L + D     +L    P   LW PYKP  YYYEV+EC RRIALTG AVFIYP S+AQVA+  L A VF  + E+  PF  P++ WLYR+G +V++ SMYLALLL+VDVSD    SQ+VF+G+++ AH  M LVVV  G+L
Sbjct:  635 CAVCSAGYSPGYSRTCKSCMGDSKKSALVFAAAIGALALAAVVALVSRLVSVVEVGPPQQQGSKGWRRTCSAWQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELKQEDRESQAELR---PAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVVAQGLL 1033          
BLAST of mRNA_P-canaliculata_contig10029.82.1 vs. uniprot
Match: D7G8S0_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S0_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 4.240e-117
Identity = 183/340 (53.82%), Postives = 245/340 (72.06%), Query Frame = 1
Query:  193 RRVLMFRDRLVKALPLTAIKTIVVTWQIITQFSAVVTVEYPTVYENFLAVLNLINLNLGFILSFSCVVETDFYTHLVLATIFPLAMLMALVMTRFIARKRNGHSLEALRAVENKHISVALFLLFMVYSSVSYIIFQTFVCDTLDDEVSYLRADYSLVCSTSAHTAFKVYAGFMMLVYPIGIPAAFAWWLASNRHHLMRAD-PNGG----PQLNAIEPMRALWAPYKPKRYYYEVIECIRRIALTGLAVFIYPGSAAQVALEALFAVVFNAIFEMQCPFINPLDKWLYRSGTWVIYFSMYLALLLKVDVSDNDSSSQDVFAGLLIAAHSVMILVVVVNGVL 1197
            +R+   R+R+   +PLT+IK ++V WQI+TQFS+V+ V YP VYE FL+VLN++N NLGFILS SC+V+++FY     ATI PL +  A  +T  +++ RN HS   ++A ++KH+S+ LF++F+VYSSV + IFQTFVC+ LD  + YLRADYSL C T  H A  VYAG M+ VYP+GIPA +AWWL   RH+L++   PN      P+L+ ++PMR LWAPYKP RYY+EV+EC  RIALTGLA F+ P SAAQ A+E + A +F A+ ++  PF++P D WLYR G W+  FSMYLAL   VDVSD D+ SQ VFA +LIAAH+ M+ V+VV  VL
Sbjct:   11 KRLTSCRERITNVVPLTSIKIVLVAWQIVTQFSSVLNVVYPGVYERFLSVLNVVNFNLGFILSVSCIVDSNFYGCRFFATICPLVVFGAQAVTYTVSKSRNRHSPAGMQAAKSKHLSITLFIMFVVYSSVPFNIFQTFVCERLDTGMDYLRADYSLTCYTGVHKAMMVYAGLMIFVYPVGIPAFYAWWLLFIRHYLVKVGAPNNFLERVPELDHLQPMRDLWAPYKPHRYYFEVVECGHRIALTGLAAFLLPNSAAQAAIEVVLAAIFVAVSDVLSPFVDPFDAWLYRIGGWITCFSMYLAL---VDVSDEDNQSQAVFAKVLIAAHAGMVAVIVVQAVL 347          
BLAST of mRNA_P-canaliculata_contig10029.82.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI)

HSP 1 Score: 380 bits (977), Expect = 1.570e-115
Identity = 200/401 (49.88%), Postives = 280/401 (69.83%), Query Frame = 1
Query:    1 CAVCEKEYAPGFQYSCRSCEGLDKWSAMGAAVAFVIVVLXXXVFVLADLVRVVNSSKTVRG--KLERRVLMFRDRLVKALPLTAIKTIVVTWQIITQFSAVVTVEYPTVYENFLAVLNLINLNLGFILSFSCVVETDFYTHLVLATIFPLAMLMALVMTRFIARKRNGHSLEALRAVENKHISVALFLLFMVYSSVSYIIFQTFVCDTLDDEVSYLRADYSLVCSTSAHTAFKVYAGFMMLVYPIGIPAAFAWWLASNRHHLMRADPNGGPQLNAIEPMRALWAPYKPKRYYYEVIECIRRIALTGLAVFIYPGSAAQVALEALFAVVFNAIFEMQCPFINPLDKWLYRSGTWVIYFSMYLALLLKVDVSDNDSSSQDVFAGLLIAAHSVMILVVVVNGVL 1197
            CAVC   ++PG+ +SC+SC G  +  A     A  ++VL   VF+ A LV VV ++ + +   + +++  +++ R+ K LPLTAIK +VV WQI+TQ+S V  VEYP  Y++FL+V++++NL+LGFILS +CV +TDFY  L+L TI P  +L  L           G +  A+  V+++H+SVALF++F++Y++VSY IF+TFVCD LDD  SYLR+DYSL C T  HTA++VYAG M+LVYP+GIP  F WWL  +RH L +    G  +   ++P   LW PYKP  YYYEV+EC RRIALTG AVFIYP S+AQVA+  L A+VF  + E   PF  P++ WLYR+G +V++ SMYLALLL+VDVSD  + SQ+VF+G+L+ AH+ M+LVVV+ G+L
Sbjct:  641 CAVCTAGFSPGYFHSCKSCMGDSRRRAFYVVSAVGVLVLLAVVFMAAKLVSVVETTPSSKAPSRWQQKRSVWQARMKKILPLTAIKIVVVVWQIVTQYSDVAGVEYPGAYKDFLSVVDVVNLDLGFILSLACVCDTDFYDRLLLTTICPAVVLGLL-----------GCTYLAMGVVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDDGNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELKQ---EGRERRAVLKPAADLWEPYKPSTYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPVEMWLYRTGHYVVFASMYLALLLRVDVSDERNQSQEVFSGVLVIAHAAMLLVVVLQGLL 1027          
BLAST of mRNA_P-canaliculata_contig10029.82.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE)

HSP 1 Score: 358 bits (918), Expect = 9.540e-111
Identity = 206/405 (50.86%), Postives = 266/405 (65.68%), Query Frame = 1
Query:    1 CAVCEKEYAPGFQYSCRSCEGLDKWSAMGAAVAFVIVVLXXXVFVLADLVRVVNS------SKTVRGKLERRVLMFRDRLVKALPLTAIKTIVVTWQIITQFSAVVTVEYPTVYENFLAVLNLINLNLGFILSFSCVVETDFYTHLVLATIFPLAMLMALVMTRFIARKRNGHSLEALRAVENKHISVALFLLFMVYSSVSYIIFQTFVCDTLDDEVSYLRADYSLVCSTSAHTAFKVYAGFMMLVYPIGIPAAFAWWLASNRHHLMRADPNGGPQLNAIEPMRALWAPYKPKRYYYEVIECIRRIALTGLAVFIYPGSAAQVALEALFAVVFNAIFEMQCPFINPLDKWLYRSGTWVIYFSMYLALLLKVDVSDNDSSSQDVFAGLLIAAHSVMILVVVVNGVL 1197
            C+VC   YAPG  Y C  C G    SA+G A        XXX  V ADLVRVV+       ++T++G+L R    F   +V A PLT +K +VV WQIITQF A+    YP  Y++FL  L  +NL++GFILS+SCVV TDF+  L++ATI P+ +L  L +T  + RKRN  S  A+RAV+NKH+S ALF++F +YSSVS+ +FQTFVCDTLDD VSYLRADYSL C T  + AF+ YA  M+ VYPIGIPA FAW L SNR  L +AD +   +L  ++P+  LW  YKP RYYYE+IE +RRI LTG+AVF+ PGS+AQ+A+  L AVVF  I E   PF   +D  LYR G  V+  S+Y+ALLLKV+VS+  S +   F  +LI A+  M + +VV   L
Sbjct:  628 CSVCADGYAPGTAYQCHECSGTSMGSAVGVAXXXXXXXXXXXAVVAADLVRVVDGDDSIKDARTLKGRLSR----FHAFVVTAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQDFLNALTPVNLDIGFILSYSCVVITDFFDRLLIATIGPVVVLALLALTFVVGRKRNIDSEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQDLQKADRD---RLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQMAVVLLLAVVFLFISESLSPFTKKIDMALYRWGNGVVLASIYVALLLKVNVSEEGSETLSAFVVVLILANVCMAITLVVQSFL 1025          
BLAST of mRNA_P-canaliculata_contig10029.82.1 vs. uniprot
Match: D7FM10_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM10_ECTSI)

HSP 1 Score: 295 bits (755), Expect = 4.080e-87
Identity = 170/402 (42.29%), Postives = 246/402 (61.19%), Query Frame = 1
Query:    1 CAVCEKEYAPGFQYSCRSCEGLDKWSAMGAAVAFVIVVLXXXVFVLADLVRVVNSSKTVRGKL-----ERRVLMFRDRLVKALPLTAIKTIVVTWQIITQFSAVVTVEYPTVYENFLAVLNLINLNLGFILSFSCVVE-TDFYTHLVLATIFPLAMLMALVMTRFIARKRN---GHSLEALRAVENKHISVALFLLFMVYSSVSYIIFQTFVCDTLDDEVSYLRADYSLVCSTSAHTAFKVYAGFMMLVYPIGIPAAFAWWLASNRHHLMRADPNGGPQLNAIEPMRALWAPYKPKRYYYEVIECIRRIALTGLAVFIYPGSAAQVALEALFAVVFNAIFEMQCPFINPLDKWLYRSGTWVIYFSMYLALLLKVDVSDNDSSSQDVFAGLLIAAHSVMILVV 1179
            CAVC   Y+P   ++C  C    +   M A V              A L+ V  +  T R  L     ER +  F  +  +A+PL + K I+V WQI+TQF+A   V YP VY++FL+ +++IN++LG ++S  C+    DF+  L+++TI PL  +  L  T  +A +RN   GH++  +  + +KH++V LF+ F+VYSSVS ++FQTF CD+LDD  +YLRADY ++C+TS H A +VYAG M++VYP+GIP  +A  L  +R  L  A  +        +P+ +LW  YKP+R+YYEVIEC RRI LTG+ VFIYP  AAQ+A+  L AV F A+F++  P+ +  D WL R G  V++ SM+  LLLKVDVS   S SQ  +AG+L+A H +M L +
Sbjct:  624 CAVCGDGYSPSLAHTCTRCSRSRRQGLMVATV-------------FAALIAVCATVATFRYLLSTEFEERNIGCFHRKTFQAIPLQSFKIIIVVWQILTQFAAAANVTYPRVYQDFLSAIDVINVDLGSMISAGCLWSGIDFHDRLLVSTIAPLLAIGMLASTYLVALRRNATAGHAI--IEIIRHKHVTVLLFVTFLVYSSVSSMVFQTFACDSLDDGNNYLRADYRILCTTSKHLALQVYAGVMVVVYPVGIPLLYAILLFQHRDILANASADKA----GAQPIASLWEAYKPERFYYEVIECGRRIMLTGVVVFIYPNDAAQIAITILIAVFFFAVFDILSPYTSEFDMWLSRGGQVVVFLSMFDLLLLKVDVSHERSQSQQAYAGVLVAGHVLMFLAI 1006          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10029.82.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPF7_ECTSI2.000e-14357.91Probable extracellular nuclease (ISS) n=1 Tax=Ecto... [more]
A0A6H5JWI3_9PHAE3.490e-14155.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHA3_9PHAE1.540e-13857.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUB5_ECTSI3.600e-12759.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L324_9PHAE1.170e-11950.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTT9_ECTSI4.380e-11951.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8S0_ECTSI4.240e-11753.82Probable extracellular nuclease (ISS) n=1 Tax=Ecto... [more]
D7FTU5_ECTSI1.570e-11549.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSF5_9PHAE9.540e-11150.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FM10_ECTSI4.080e-8742.29Probable extracellular nuclease n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10029contigP-canaliculata_contig10029:10083..11713 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score425.2
Seed ortholog evalue3.4e-116
Seed eggNOG ortholog2880.D7FPF7
EggNOG OGs2D43J@1,2STRI@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal anchor
Exons2
Model size1242
Cds size1242
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815575.6564653-CDS-P-canaliculata_contig10029:10082..110391622815575.6564653-CDS-P-canaliculata_contig10029:10082..11039Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10029 10083..11039 -
1693494145.9430192-CDS-P-canaliculata_contig10029:10082..110391693494145.9430192-CDS-P-canaliculata_contig10029:10082..11039Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10029 10083..11039 -
1622815575.6773314-CDS-P-canaliculata_contig10029:11428..117131622815575.6773314-CDS-P-canaliculata_contig10029:11428..11713Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10029 11429..11713 -
1693494145.954276-CDS-P-canaliculata_contig10029:11428..117131693494145.954276-CDS-P-canaliculata_contig10029:11428..11713Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10029 11429..11713 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10029.82.1prot_P-canaliculata_contig10029.82.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig10029 10083..11713 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig10029.82.1

>prot_P-canaliculata_contig10029.82.1 ID=prot_P-canaliculata_contig10029.82.1|Name=mRNA_P-canaliculata_contig10029.82.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=414bp
CAVCEKEYAPGFQYSCRSCEGLDKWSAMGAAVAFVIVVLIVVVFVLADLV
RVVNSSKTVRGKLERRVLMFRDRLVKALPLTAIKTIVVTWQIITQFSAVV
TVEYPTVYENFLAVLNLINLNLGFILSFSCVVETDFYTHLVLATIFPLAM
LMALVMTRFIARKRNGHSLEALRAVENKHISVALFLLFMVYSSVSYIIFQ
TFVCDTLDDEVSYLRADYSLVCSTSAHTAFKVYAGFMMLVYPIGIPAAFA
WWLASNRHHLMRADPNGGPQLNAIEPMRALWAPYKPKRYYYEVIECIRRI
ALTGLAVFIYPGSAAQVALEALFAVVFNAIFEMQCPFINPLDKWLYRSGT
WVIYFSMYLALLLKVDVSDNDSSSQDVFAGLLIAAHSVMILVVVVNGVLS
GIEGFQKVVEQDIP
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mRNA from alignment at P-canaliculata_contig10029:10083..11713-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig10029.82.1 ID=mRNA_P-canaliculata_contig10029.82.1|Name=mRNA_P-canaliculata_contig10029.82.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1631bp|location=Sequence derived from alignment at P-canaliculata_contig10029:10083..11713- (Pelvetia canaliculata dioecious)
TGTGCTGTATGTGAGAAGGAATACGCGCCTGGGTTTCAATACAGCTGCCG CAGCTGCGAGGGGTTAGACAAGTGGTCGGCAATGGGCGCAGCGGTCGCGT TCGTTATAGTGGTCTTGATCGTGGTTGTCTTTGTGCTGGCGGACCTCGTT CGCGTTGTGAACAGCTCCAAAACTGTGCGCGGCAAGTTGGAGAGGAGGGT TTTGATGTTTCGAGATAGGCTTGTCAAGGCTCTTCCCCTAACTGCCATCA AAACCATTGTGGTCACGTGGCAGATCATCACTCAGGTGAGGATTCGACTA CAAGTAATCTCATGTCGAGGCATGAGCAATAGAACGCCATCTCCAACATA TTCCCTTCACTAACACGTGCTCGCTCAAGGTTTTGAAATATTTATCGCTC GCTCTTGATGATATGCACGACTAACCCTATGTTCAACAGCCACCCAGGTC ACACGAGGATTGCAAGTGTGTGATGAACTCGAAAGTTGCCGTTTTCAGGA GCATTTAAAATTCAGCGAGCGGTACCGCAACGTTGAGTACGCATCGTTCG TTTGGCTGGCACATTGCGATAAGCGCACCCTGCATCCCGGGCCGAAGTCA CCCCACATTTTTGCCAGCTATGGCCACAGTGTTCCCTTGTACGTTCGTCT GCGACTCTGCTTTCTCCGGCGCAGTTCTCAGCTGTGGTAACCGTTGAATA TCCTACCGTGTACGAGAACTTCCTGGCGGTGTTGAATCTGATCAACCTCA ACCTTGGATTCATCTTGTCGTTCTCTTGCGTCGTCGAGACTGACTTCTAT ACGCATCTCGTTCTGGCAACAATCTTCCCCCTGGCTATGCTGATGGCGTT GGTAATGACGCGTTTCATTGCGAGAAAACGTAATGGACATTCTCTTGAGG CGTTGCGCGCAGTGGAGAACAAGCACATTTCAGTTGCGCTCTTCCTCCTG TTTATGGTGTACTCCTCCGTGTCGTACATTATCTTTCAGACATTTGTTTG CGACACTCTAGATGACGAAGTGAGTTACTTGCGGGCCGACTACAGCCTCG TGTGCTCTACCAGTGCGCACACAGCGTTCAAGGTGTACGCGGGCTTTATG ATGCTCGTGTATCCAATCGGTATACCGGCTGCCTTTGCGTGGTGGTTGGC GTCGAACCGACATCATCTGATGCGAGCGGATCCAAATGGAGGCCCGCAGC TGAATGCAATCGAGCCGATGAGAGCCCTGTGGGCTCCGTACAAGCCAAAG CGCTACTACTATGAGGTCATCGAGTGCATTCGTCGGATAGCATTGACGGG ACTAGCTGTCTTCATTTACCCAGGCAGCGCGGCGCAGGTCGCTCTTGAGG CGCTTTTTGCTGTCGTTTTTAATGCCATCTTTGAGATGCAGTGCCCATTC ATTAATCCCCTGGATAAGTGGTTATACCGATCTGGAACATGGGTCATCTA CTTCAGTATGTACCTCGCGCTGCTTTTGAAGGTCGATGTATCAGACAATG ATAGCAGCAGCCAAGACGTCTTCGCAGGTCTTCTAATTGCTGCCCATAGC GTAATGATACTCGTAGTGGTCGTTAATGGTGTACTAAGCGGGATTGAGGG ATTCCAAAAGGTTGTAGAGCAAGACATACCC
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Coding sequence (CDS) from alignment at P-canaliculata_contig10029:10083..11713-

>mRNA_P-canaliculata_contig10029.82.1 ID=mRNA_P-canaliculata_contig10029.82.1|Name=mRNA_P-canaliculata_contig10029.82.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2484bp|location=Sequence derived from alignment at P-canaliculata_contig10029:10083..11713- (Pelvetia canaliculata dioecious)
TGTGCTGTATGTGAGAAGGAATACGCGCCTGGGTTTCAATACAGCTGCCG
CAGCTGCGAGGGGTTAGACAAGTGGTCGGCAATGGGCGCAGCGGTCGCGT
TCGTTATAGTGGTCTTGATCGTGGTTGTCTTTGTGCTGGCGGACCTCGTT
CGCGTTGTGAACAGCTCCAAAACTGTGCGCGGCAAGTTGGAGAGGAGGGT
TTTGATGTTTCGAGATAGGCTTGTCAAGGCTCTTCCCCTAACTGCCATCA
AAACCATTGTGGTCACGTGGCAGATCATCACTCAGTGTGCTGTATGTGAG
AAGGAATACGCGCCTGGGTTTCAATACAGCTGCCGCAGCTGCGAGGGGTT
AGACAAGTGGTCGGCAATGGGCGCAGCGGTCGCGTTCGTTATAGTGGTCT
TGATCGTGGTTGTCTTTGTGCTGGCGGACCTCGTTCGCGTTGTGAACAGC
TCCAAAACTGTGCGCGGCAAGTTGGAGAGGAGGGTTTTGATGTTTCGAGA
TAGGCTTGTCAAGGCTCTTCCCCTAACTGCCATCAAAACCATTGTGGTCA
CGTGGCAGATCATCACTCAGTTCTCAGCTGTGGTAACCGTTGAATATCCT
ACCGTGTACGAGAACTTCCTGGCGGTGTTGAATCTGATCAACCTCAACCT
TGGATTCATCTTGTCGTTCTCTTGCGTCGTCGAGACTGACTTCTATACGC
ATCTCGTTCTGGCAACAATCTTCCCCCTGGCTATGCTGATGGCGTTGGTA
ATGACGCGTTTCATTGCGAGAAAACGTAATGGACATTCTCTTGAGGCGTT
GCGCGCAGTGGAGAACAAGCACATTTCAGTTGCGCTCTTCCTCCTGTTTA
TGGTGTACTCCTCCGTGTCGTACATTATCTTTCAGACATTTGTTTGCGAC
ACTCTAGATGACGAAGTGAGTTACTTGCGGGCCGACTACAGCCTCGTGTG
CTCTACCAGTGCGCACACAGCGTTCAAGGTGTACGCGGGCTTTATGATGC
TCGTGTATCCAATCGGTATACCGGCTGCCTTTGCGTGGTGGTTGGCGTCG
AACCGACATCATCTGATGCGAGCGGATCCAAATGGAGGCCCGCAGCTGAA
TGCAATCGAGCCGATGAGAGCCCTGTGGGCTCCGTACAAGCCAAAGCGCT
ACTACTATGAGGTCATCGAGTGCATTCGTCGGATAGCATTGACGGGACTA
GCTGTCTTCATTTACCCAGGCAGCGCGGCGCAGGTCGCTCTTGAGGCGCT
TTTTGCTGTCGTTTTTAATGCCATCTTTGAGATGCAGTGCCCATTCATTA
ATCCCCTGGATAAGTGGTTATACCGATCTGGAACATGGGTCATCTACTTC
AGTATGTACCTCGCGCTGCTTTTGAAGGTCGATGTATCAGACAATGATAG
CAGCAGCCAAGACGTCTTCGCAGGTCTTCTAATTGCTGCCCATAGCGTAA
TGATACTCGTAGTGGTCGTTAATGGTGTACTAAGCGGGATTGAGGGATTC
CAAAAGGTTGTAGAGCAAGACATACCCTTCTCAGCTGTGGTAACCGTTGA
ATATCCTACCGTGTACGAGAACTTCCTGGCGGTGTTGAATCTGATCAACC
TCAACCTTGGATTCATCTTGTCGTTCTCTTGCGTCGTCGAGACTGACTTC
TATACGCATCTCGTTCTGGCAACAATCTTCCCCCTGGCTATGCTGATGGC
GTTGGTAATGACGCGTTTCATTGCGAGAAAACGTAATGGACATTCTCTTG
AGGCGTTGCGCGCAGTGGAGAACAAGCACATTTCAGTTGCGCTCTTCCTC
CTGTTTATGGTGTACTCCTCCGTGTCGTACATTATCTTTCAGACATTTGT
TTGCGACACTCTAGATGACGAAGTGAGTTACTTGCGGGCCGACTACAGCC
TCGTGTGCTCTACCAGTGCGCACACAGCGTTCAAGGTGTACGCGGGCTTT
ATGATGCTCGTGTATCCAATCGGTATACCGGCTGCCTTTGCGTGGTGGTT
GGCGTCGAACCGACATCATCTGATGCGAGCGGATCCAAATGGAGGCCCGC
AGCTGAATGCAATCGAGCCGATGAGAGCCCTGTGGGCTCCGTACAAGCCA
AAGCGCTACTACTATGAGGTCATCGAGTGCATTCGTCGGATAGCATTGAC
GGGACTAGCTGTCTTCATTTACCCAGGCAGCGCGGCGCAGGTCGCTCTTG
AGGCGCTTTTTGCTGTCGTTTTTAATGCCATCTTTGAGATGCAGTGCCCA
TTCATTAATCCCCTGGATAAGTGGTTATACCGATCTGGAACATGGGTCAT
CTACTTCAGTATGTACCTCGCGCTGCTTTTGAAGGTCGATGTATCAGACA
ATGATAGCAGCAGCCAAGACGTCTTCGCAGGTCTTCTAATTGCTGCCCAT
AGCGTAATGATACTCGTAGTGGTCGTTAATGGTGTACTAAGCGGGATTGA
GGGATTCCAAAAGGTTGTAGAGCAAGACATACCC
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