Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 678 |
| Cds size | 366 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815574.0884-UTR-P-canaliculata_contig100116:1..120 | 1622815574.0884-UTR-P-canaliculata_contig100116:1..120 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig100116 2..120 + |
| 1693494144.974232-UTR-P-canaliculata_contig100116:1..120 | 1693494144.974232-UTR-P-canaliculata_contig100116:1..120 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig100116 2..120 + |
| 1622815574.1124544-UTR-P-canaliculata_contig100116:486..679 | 1622815574.1124544-UTR-P-canaliculata_contig100116:486..679 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig100116 487..679 + |
| 1693494145.005596-UTR-P-canaliculata_contig100116:486..679 | 1693494145.005596-UTR-P-canaliculata_contig100116:486..679 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig100116 487..679 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815574.099811-CDS-P-canaliculata_contig100116:120..486 | 1622815574.099811-CDS-P-canaliculata_contig100116:120..486 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100116 121..486 + |
| 1693494144.9923077-CDS-P-canaliculata_contig100116:120..486 | 1693494144.9923077-CDS-P-canaliculata_contig100116:120..486 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100116 121..486 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig100116.63.1 >prot_P-canaliculata_contig100116.63.1 ID=prot_P-canaliculata_contig100116.63.1|Name=mRNA_P-canaliculata_contig100116.63.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=122bp
MLYCDDDDGRMEYIGLVGCECECVPGSWGVARCSRECGCLIASRDGRCDN
EDAISDSITCSYMFGIHISDRGAFGGAAVVSAFARVGAVAFVTTVTICCD
NNIRHLVVFFLLRNDGCRLSI* back to topmRNA from alignment at P-canaliculata_contig100116:2..679+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig100116.63.1 ID=mRNA_P-canaliculata_contig100116.63.1|Name=mRNA_P-canaliculata_contig100116.63.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=678bp|location=Sequence derived from alignment at P-canaliculata_contig100116:2..679+ (Pelvetia canaliculata dioecious)
CACTCCATCAACCCCAACATGAACAGCACATCCGTACCCGAACCTTACAG
CTTCAGAGGCTATTAAACACGCGAGTAGTTGTCGTTCAAGAGAGCGCAGT
TAATTCGTCGCGCTACGCGATGTTGTACTGCGACGACGATGATGGTCGCA
TGGAGTATATCGGTCTCGTGGGCTGCGAGTGTGAGTGTGTTCCTGGGAGT
TGGGGTGTCGCTCGTTGTTCGAGAGAATGCGGTTGCTTGATTGCGTCCCG
CGACGGGCGCTGCGACAACGAGGACGCGATATCCGATAGCATTACGTGCT
CATACATGTTTGGTATACATATTAGTGACAGGGGGGCGTTTGGGGGTGCT
GCTGTAGTGTCGGCTTTTGCTCGAGTAGGCGCAGTTGCGTTCGTTACTAC
CGTGACGATATGCTGCGATAATAACATAAGACACCTGGTAGTATTTTTCC
TCCTACGAAATGATGGGTGTAGGTTGAGCATTTAGATATCCCCTTGTCGA
GTGTGTTTTTTTGGCGCACCGCTTGCTGCAAGCAAGAGCACGACAAAAAG
GGTGGACTAATGTGAGGATATTCGGGTCACTGGAGAGCCGAGGGATGTTC
CATGCGGAATCCCACTTAGAGTGGTAGCGTTCGAGACTACTCTGGCGTCT
GGGCTTACAAAAAGTTAATAGTTCCTAG back to topCoding sequence (CDS) from alignment at P-canaliculata_contig100116:2..679+ >mRNA_P-canaliculata_contig100116.63.1 ID=mRNA_P-canaliculata_contig100116.63.1|Name=mRNA_P-canaliculata_contig100116.63.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=732bp|location=Sequence derived from alignment at P-canaliculata_contig100116:2..679+ (Pelvetia canaliculata dioecious)
ATGTTGTACTGCGACGACGATGATGGTCGCATGGAGTATATCGGTCTCGT
GGGCTGCGAGTGTGAGTGTGTTCCTGGGAGTTGGGGTGTCGCTCGTTGTT
CGAGAGAATGCGGTTGCTTGATTGCGTCCCGCGACGGGCGCTGCGACAAC
GAGGACGCGATATCCGATAGCATTACGTGCTCATACATGTTTGGTATACA
TATTAGTGACAGGGGGGCGTTTGGGGGTGCTGCTGTAGTGTCGGCTTTTG
CTCGAGTAGGCGCAGTTGCGTTCGTTACTACCGTGACGATATGCTGCGAT
AATAACATAAGACACCTGGTAGTATTTTTCCTCCTACGAAATGATGGGTG
TAGGTTGAGCATTTAGATGTTGTACTGCGACGACGATGATGGTCGCATGG
AGTATATCGGTCTCGTGGGCTGCGAGTGTGAGTGTGTTCCTGGGAGTTGG
GGTGTCGCTCGTTGTTCGAGAGAATGCGGTTGCTTGATTGCGTCCCGCGA
CGGGCGCTGCGACAACGAGGACGCGATATCCGATAGCATTACGTGCTCAT
ACATGTTTGGTATACATATTAGTGACAGGGGGGCGTTTGGGGGTGCTGCT
GTAGTGTCGGCTTTTGCTCGAGTAGGCGCAGTTGCGTTCGTTACTACCGT
GACGATATGCTGCGATAATAACATAAGACACCTGGTAGTATTTTTCCTCC
TACGAAATGATGGGTGTAGGTTGAGCATTTAG back to top
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