Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 855 |
| Cds size | 855 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815574.0432608-CDS-P-canaliculata_contig100112:179..1034 | 1622815574.0432608-CDS-P-canaliculata_contig100112:179..1034 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100112 180..1034 + |
| 1693494144.9659982-CDS-P-canaliculata_contig100112:179..1034 | 1693494144.9659982-CDS-P-canaliculata_contig100112:179..1034 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100112 180..1034 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig100112.62.1 >prot_P-canaliculata_contig100112.62.1 ID=prot_P-canaliculata_contig100112.62.1|Name=mRNA_P-canaliculata_contig100112.62.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=285bp
GTVLFLETLSEGTAEVKVIDGNISNTQGGLDVVLVTISNDKKLDGKTRRS
RTDNQGIARFVKLVPGRTYVAKVVKKSKLTDGTQGTQGSGEELLLTNSES
FSLPKGVGASVLLSISEKGPAPKPSRNAGSDAAASPNANRPAATRPPRQD
GVPPMLQDPRKVSGIARGEEKDPAGQLTVRAVQGTFRASEAGLTADFPRD
TPIYLIGYLSDGSVHVETQPIKDDGRATFSGLERGTASYYVASVFPRGDR
YDRLLSKPFQMPPQIGMRVMLAGEAIASKADGVDD back to topmRNA from alignment at P-canaliculata_contig100112:180..1034+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig100112.62.1 ID=mRNA_P-canaliculata_contig100112.62.1|Name=mRNA_P-canaliculata_contig100112.62.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=855bp|location=Sequence derived from alignment at P-canaliculata_contig100112:180..1034+ (Pelvetia canaliculata dioecious)
GGGACCGTGCTGTTTCTAGAAACACTTAGCGAGGGCACTGCTGAAGTCAA
AGTTATCGACGGAAATATCAGCAATACCCAGGGTGGTCTTGACGTTGTTC
TGGTCACAATTTCAAACGATAAAAAGCTCGACGGGAAAACGCGCCGGTCG
CGAACAGATAACCAGGGTATCGCCCGCTTCGTAAAACTTGTTCCGGGTCG
AACCTACGTGGCCAAGGTCGTAAAGAAATCTAAACTCACAGACGGCACCC
AAGGCACCCAGGGCAGCGGGGAAGAACTGCTCCTGACCAATAGCGAATCG
TTTAGTTTGCCAAAAGGCGTCGGAGCAAGCGTTCTGCTTTCGATTTCGGA
GAAAGGCCCCGCTCCTAAACCTTCCAGAAATGCCGGCTCAGATGCCGCGG
CATCACCAAACGCAAACCGCCCCGCTGCAACAAGGCCGCCTCGGCAAGAC
GGGGTTCCACCGATGTTACAGGACCCGCGCAAGGTCAGCGGTATCGCCAG
GGGAGAGGAAAAAGATCCAGCCGGCCAGCTCACCGTTCGAGCGGTACAGG
GAACGTTTCGCGCGAGCGAAGCGGGGTTGACTGCCGACTTTCCCAGAGAC
ACACCCATCTATTTGATTGGATACCTTTCCGACGGATCGGTGCACGTTGA
AACCCAGCCCATTAAAGATGATGGTCGTGCGACCTTTTCAGGTCTCGAGC
GCGGCACGGCTTCCTACTACGTAGCTAGCGTATTTCCTCGTGGCGATAGA
TACGACCGTCTTCTCAGTAAGCCATTTCAGATGCCTCCTCAAATCGGTAT
GCGCGTTATGCTTGCAGGAGAAGCTATCGCCTCAAAAGCAGATGGGGTTG
ATGAT back to topCoding sequence (CDS) from alignment at P-canaliculata_contig100112:180..1034+ >mRNA_P-canaliculata_contig100112.62.1 ID=mRNA_P-canaliculata_contig100112.62.1|Name=mRNA_P-canaliculata_contig100112.62.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1710bp|location=Sequence derived from alignment at P-canaliculata_contig100112:180..1034+ (Pelvetia canaliculata dioecious)
GGGACCGTGCTGTTTCTAGAAACACTTAGCGAGGGCACTGCTGAAGTCAA
AGTTATCGACGGAAATATCAGCAATACCCAGGGTGGTCTTGACGTTGTTC
TGGTCACAATTTCAAACGATAAAAAGCTCGACGGGAAAACGCGCCGGTCG
CGAACAGATAACCAGGGTATCGCCCGCTTCGTAAAACTTGTTCCGGGTCG
AACCTACGTGGCCAAGGTCGTAAAGAAATCTAAACTCACAGACGGCACCC
AAGGCACCCAGGGCAGCGGGGAAGAACTGCTCCTGACCAATAGCGAATCG
TTTAGTTTGCCAAAAGGCGTCGGAGCAAGCGTTCTGCTTTCGATTTCGGA
GAAAGGCCCCGCTCCTAAACCTTCCAGAAATGCCGGCTCAGATGCCGCGG
CATCACCAAACGCAAACCGCCCCGCTGCAACAAGGCCGCCTCGGCAAGAC
GGGGTTCCACCGATGTTACAGGACCCGCGCAAGGTCAGCGGTATCGCCAG
GGGAGAGGAAAAAGATCCAGCCGGCCAGCTCACCGTTCGAGCGGTACAGG
GAACGTTTCGCGCGAGCGAAGCGGGGTTGACTGCCGACTTTCCCAGAGAC
ACACCCATCTATTTGATTGGATACCTTTCCGACGGATCGGTGCACGTTGA
AACCCAGCCCATTAAAGATGATGGTCGTGCGACCTTTTCAGGTCTCGAGC
GCGGCACGGCTTCCTACTACGTAGCTAGCGTATTTCCTCGTGGCGATAGA
TACGACCGTCTTCTCAGTAAGCCATTTCAGATGCCTCCTCAAATCGGTAT
GCGCGTTATGCTTGCAGGAGAAGCTATCGCCTCAAAAGCAGATGGGGTTG
ATGATGGGACCGTGCTGTTTCTAGAAACACTTAGCGAGGGCACTGCTGAA
GTCAAAGTTATCGACGGAAATATCAGCAATACCCAGGGTGGTCTTGACGT
TGTTCTGGTCACAATTTCAAACGATAAAAAGCTCGACGGGAAAACGCGCC
GGTCGCGAACAGATAACCAGGGTATCGCCCGCTTCGTAAAACTTGTTCCG
GGTCGAACCTACGTGGCCAAGGTCGTAAAGAAATCTAAACTCACAGACGG
CACCCAAGGCACCCAGGGCAGCGGGGAAGAACTGCTCCTGACCAATAGCG
AATCGTTTAGTTTGCCAAAAGGCGTCGGAGCAAGCGTTCTGCTTTCGATT
TCGGAGAAAGGCCCCGCTCCTAAACCTTCCAGAAATGCCGGCTCAGATGC
CGCGGCATCACCAAACGCAAACCGCCCCGCTGCAACAAGGCCGCCTCGGC
AAGACGGGGTTCCACCGATGTTACAGGACCCGCGCAAGGTCAGCGGTATC
GCCAGGGGAGAGGAAAAAGATCCAGCCGGCCAGCTCACCGTTCGAGCGGT
ACAGGGAACGTTTCGCGCGAGCGAAGCGGGGTTGACTGCCGACTTTCCCA
GAGACACACCCATCTATTTGATTGGATACCTTTCCGACGGATCGGTGCAC
GTTGAAACCCAGCCCATTAAAGATGATGGTCGTGCGACCTTTTCAGGTCT
CGAGCGCGGCACGGCTTCCTACTACGTAGCTAGCGTATTTCCTCGTGGCG
ATAGATACGACCGTCTTCTCAGTAAGCCATTTCAGATGCCTCCTCAAATC
GGTATGCGCGTTATGCTTGCAGGAGAAGCTATCGCCTCAAAAGCAGATGG
GGTTGATGAT back to top
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