mRNA_P-canaliculata_contig100.48.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig100.48.1

>prot_P-canaliculata_contig100.48.1 ID=prot_P-canaliculata_contig100.48.1|Name=mRNA_P-canaliculata_contig100.48.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=516bp
MTSSMGSVDAKARNILQEVVHLVATSGKDTRLPVKKILPHACANRDVDRC
VSLLETMVSLGQSAALQLLWLYERYDVPDAGGSMTKCAYDHFGRDLGKMR
HLFAFLAVRKIEEIIGMAGLDKKALALQLADWDPIEKVQVLTAWEAAHPK
MSADDLVSLIRQDQARGGDKLGSLWRCSLSSIKRELEMEAKLKWDVHRWK
GRTVSADMLYSSRLESRGAIDVYRSPHESPFGFAPPRKTGLNDRRRWAPE
RNVRAGTKTEKPPSREPCGSFEVSDATGACTSINISSARSVINEADNEAL
VKKTPPRHHRHQSPAGLGENTGVRGDLPPRLTLPTPTYAGREFDPCRLCK
ACTIEWRSAIVLRGHDLQLWHAVDDERRALLELQRRNDIFKAEWAKTEWR
DRQVSELLRFIFEANLDSFSRHSLEERGKAARSTQSGELRRMLDLKLSYK
AAGKNGAAKDEGLKRLSERRARTWASTLRLKASLNLDRHYASLEPGDFPR
HSRGGTIRPRSASIF*
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mRNA from alignment at P-canaliculata_contig100:32500..37957-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig100.48.1 ID=mRNA_P-canaliculata_contig100.48.1|Name=mRNA_P-canaliculata_contig100.48.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=5458bp|location=Sequence derived from alignment at P-canaliculata_contig100:32500..37957- (Pelvetia canaliculata dioecious)
AAAAAAAAGGAACTGCTGCTTGGATTGAGTGTCGAGGACAAGCGCGTGAT
GACGTCATCCATGGGCTCCGTCGACGCCAAGGCACGCAACATGTTGCAGG
TGAATGTACCCACAACCTCGATATGGACGGTGTGGGAGGGTCCCCAACTC
TTGAAGCAATCGTACTCGAAAAACGTAATAGATATGAGGTTGGCATTTAC
CGCAAAAAATCGTTGTGTGCTAAACTGTATCGCCGACCACGATGGCAATT
CCGTATGCCCCGAGAGGTCCCTCTTCGTATACGGCTATCCGACGTTATGA
TAACCCTTGTACTGCAGGAAGTGGGCCCTTTAGGGAAGCGAAGCCAAACC
AAAGCTCGTCGATCATGCATGCCGGGTGTACCTCATTCCCGTGTGGTAAA
GCAATCACAGCGGCAGGCACGAATCTGCCCTATCCTGTACCGCAGTACTA
CGGATTCCCTTTACGCTCAAAACCATTTCCCTTTATTCGTCATCTACAAG
GCTGAATGCTTATCCCCCGCGCGACAAAGTTTGCAGGAGGTCGTGCACCT
GGTCGCTACCTCTGGCAAGGATACCCGACTGCCGGTCAAGAAGATTCTGC
CGCACGCCTGCGCCAACCGCGACGTCGACAGGTACGACTACACCAGTAGA
GTAAGTACACCGCAATAAAAAACGACACATGCTCCCACCGGACGGGCCGA
ATTGACCAGATGACGCAGCGGTTCGCAGCACGCTTACGTCGCCGAGTGGT
GCTCGTCGTCTTCCGGCAGAACAGTCAATACATACCGGTAGTGTACACGC
TCATCTCGGCTGTGCTTTCAGATGCGTCTCCTTGCTGGAGACAATGGTGA
GCCTCGGGCAGAGCGCTGCTCTCCAGCTGCTGTGGCTGTACGAGCGCTAC
GACGTGCCTGATGCCGGCGGCAGTATGACGAAGTGTGCGTATGACCACTT
CGGAAGAGACTTAGGCAAGATGAGGCATCTGTTCGCTTTCCTTGCCGTGC
GTAGAGCTTCTAACGAATGGATAAGTTAAGCGCTGCCTTGGCATATGCTT
TCGTGTCGTCTCCTCTACCCGTAATGGGCGTCTTTTCCCTACCTAGGGAG
AGGTTTTCGATGTGACAGGACCTGATGCAAAATGATAATCCTCGCTGTCG
AGGCGAGGTGGTAAAAAATCACGCCTCGTTACCCAGGCCACCTTGTTTGG
GGATGTTTGACGCGTGGAGTCTGTGGCCAAAGTTGCAAACGCCCCACTTA
TACAGCACTCTGTGATCTCCGTGACGGAAGGTGTGAGTGAGCTCTTTTTC
GACGCGAGCTTCTGCTCTAGTGTGTGCGGAACTGTGCCAGATCACTCTGA
CGCGTCGGATCTATCTGTCGCTGCCACTGCCCTATTTTTTTTAAACGTCG
GGATTTCTACATTTTCGCTTCGCGTACAAAGGGCTAGGCAAGATTGAGGA
GATTATCGGTATGGCTGGACTGGACAAGAAAGCCCTGGCTCTCCAGCTAG
CAGACTGGGATCCTATTGAAAAAGTCCAGGTGGAGGTGGAGACGCTTGCC
GGGACAGACTTGCCCCGTGTGTGTGACGAGTTCGCTGCCGTACAAGAGCA
CGTTCCCCGCAACCGGGCGCTGTTCTTAGGAGACTATAATAGTAATGTTG
CAATACGAGGGCGCACTCTATGCGGTTGTTACCCCCCGGCACATTGCAGC
TAGTACGTTATATAACCGAAATGGATTGCTTAAGATTGACAACGGGAACC
ACCCTGCCGCTTTGGAAATAGGTTCTTACAGCCTGGGAGGCCGCACACCC
CAAGATGAGTGCCGATGACTTGGTTAGCCTCATCCGACAAGACCAGGTGC
CAGTGCTTCGACTACCTCACGCACCACATGTGTCGAGGCAAGGCCAAGCG
TCGCGTTTAGACTGTTTCCCGTCCTTCCACCTCCCCCTTGCTATTATAGA
GAGCGCCCCCTCACATGGGTTCCGATATTTAATAACAGATAAACTGTTTA
CTCGTAACTAGGCACGTGGCGGAGATAAATTGGGGAGCCTTTGGCGCTGT
TCTCTCAGCTCCATCAAGCGCGAGTTGGAAATGGAAGCGAAGTTGAAGTG
GGATGTGCACCGCTGGAAAGGCCGTACGGTCAGCGCTGGTACGTAGTTGT
TACAGAACTCGCATGCGGAGGTAGATTCGGTTATTTGCGCGGGCTTTGGG
CATGGCGGATCAGACCCACCTGCACGTGTCTCGTCAACCCTAGCTTTTGT
AAACTATAAAGTGACAACCCCGCGCACTCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCTCCCCCCCCCCCCCCCCCCCCCCCTTTTTTCTTCTGTGG
TTTATTTTTGTGCTTCTTCTTACTCCACCCACNNNNNNNNNNGGGCAGGG
CGGGTCAGACCCCCCCGCACGGGTCCCGTCAACCCCAGCTTTTGTAAACT
ATCAAGTGACACCCCCGCGCCCCCCCCCCCCCCCCCCCACTTTCTCCCTC
TTCCTTCCCCTCCCAGGTGCGCCGCACTTTTTTCGTACTTGGGTCAAATT
TAGCTCCATTATCCGATTGCGACTACGAACTACTGTAGAATGTTTGCGAT
GAAGAAAACAATGATAAGAGAGCCATGGCGCGCGGACCATCTTCAGTACG
ACACGTTTCCTGCCTTGTGAATGCGCTTTTACGTGATGCCTTGGGGGGTA
GATGCGCGCACAGTTTCTGTGGTGCACAGAGCCACCCTATCACGGTAGAG
CTGAATGCGACTAACCCTCCTCGTTCTCCCTCGATGTCCAATGACTCGAG
GTCGCTGTTCAACGACAGATATGCTTTACAGCTCCCGTTTAGAGAGTAGA
GGGGCGATAGATGTGTATCGTTCGCCGCACGAAAGCCCGTTCGGTTTTGC
TCCGCCGCGGAAAACGGGGTTGAACGACCGACGAAGATGGGCACCAGAGC
GGAACGTGAGGGCAGGGACAAAAACAGAGAAGCCACCGTCGAGAGAGCCG
TGCGGCAGTTTTGAGGTTAGCGACGCTACCGGTGCCTGCACCAGCATCAA
CATTAGCAGCGCACGAAGCGTTATCAACGAGGCCGACAATGAGGCCCTTG
TCAAGAAGACTCCTCCCCGGCACCACCGACATCAAAGCCCAGCGGGCCTG
GGGGAAAACACAGGCGTGAGAGGAGACTTACCGCCACGGCTGACGTTGCC
GACACCTACGTATGCCGGCAGGGAGTTTGACCCGTGTCGTCTGTGCAAGG
CCTGCACAATTGAGTGGCGTAGCGCGATCGTTCTCAGAGGGCACGACCTG
CAGCTTTGGCACGCGGTGGACGACGAGAGGAGGGCATTACTGGAGCTGCA
GCGGCGAAATGATATCTTCAAAGCCGAGTGGGCAAAGACCGAGTGGAGAG
ACCGACAGGTAGATATCTGTCTCTTTTTCTCTCGAAACATATATATGTGG
ACGTAGTTAAACGTGGTGTATCACCGCCGCGGAAGTGGTGTCTGAGGGGG
GGGAGGTTACGGAGGTGCCATGCCCTTCTTGTGGGAGACCAAACTGTGCA
TGCACACCTGGCAGTGTTGCTTGTACCGAGTCCCCACACGTAGATCACGC
TGCAGTGGTGAGTCTTTTCTGGGTGGCTACCATTGTATACGAAGGTAGCG
CTCGTGCATTAACAGCTCGTACGAGAACGTCGCTTCTACACGAAGAGTCA
GTCGCTTTTTTTTTTTATCCTCCCCTTCAACCGCGCACCCGCCCTCTGAC
TTCCCCACAAGCAAGAAGCCCCGCAGAAGCTGTTTGCTGGGTGCGCCCAC
CTCCGGGGGATGATATGTCATGGCGTCTCACCGAGCATATCGTGACCCCT
CTGCTTCAGGTATCCGAGCTCTTGCGCTTCATCTTCGAAGCCAATCTCGA
CTCCTTCAGCCGCCACAGTTTGGAGGAGCGGGGAAAGGCTGCGCGTAGCA
CGCAGGCAAAGTCTGTCGTACCTCGAAGGGTTTGGGTACCCAGACGGGTC
GCTATTTACAGTCGCGGTATCTCAAACAGTGTTATCGTCTCTGTAACTTC
TTAAGGGGCCACTTCTGCCGTGTCACTTCAACAATACGGTTTTAACTCTA
CGCCGCTCAACAGGCGAACGGACGACGATTATGTACATGTTTTTTGCGCT
TCGGTCTCGACAGAGTTAGTTACAGTATAAAAAGAGGCACCAGCGTTATT
ATGTTCCTCGCCTCCGCTTGATCTTGGCTCGGGCAACCAGTCTGGGGAAC
TACGACGGATGCTAGACTTGAAGCTGTCCTACAAGGCTGCGGGGAAGAAT
GGCGCGGCCAAAGACGAAGGGCTAAAACGCTTGAGCGAAAGACGGGCAAG
GACGTGGGCCTCCACCTTGAGGTCCGTCCGTTCAGTGCATCTTCGATGGC
TCATTTCTTGGGGGGCTGCTGCAGTCATCCACGTATTATCACCATAGTGC
CTCCGGATCGACATCGAGCACGGCGTCCATACGAGAGGGTTGGGTTTTTA
TCCTTTCGTGTCCGGATCTACACGCATCCCCATTCATACCACGGCAAAAC
CCCGCTACACTCGAACTTCAGACCTAGATAAGCCGGGCTGCTCCTTCGCC
GCCTGGAGAAATGTTTTCTTCTCGTCTCACATAACAACGACACGGATTGT
CCGCCACGTTTTATGCCCCCCGAGTAGGTTGAAGGCATCTCTCAACCTAG
ACAGACATTACGCGTCTCTTGAGCCCGGAGACTTCCCACGTCACTCGAGA
GGAGGCACAATACGTCCACGAAGCGCTTCGATTTTCTAGCTGATGGAACT
CCGGTGACGCCGCAGGGGGCCAAGCAGACGTTCGGCAGGGCAAGCCCTGA
CGCGGATGATGGGAGCGAGAAAATCTGGCATTGGAAATCTGGTTACGTGA
AGTCAACCTCGAGATTTGCCCGGCAGCAGCAAAACTACTCTTGGTTGGAT
CGAAAAACGTTTGAGACCGCCCAAGGCGGGCGCCCCGTCGCCAACGCGGC
CGAACCTGCAGGATGTGTAAGGCCGCTTTAAAGCAACATCGTGCGTGGAC
CGTATCGACGGTACAAACCCACAAGCGATCACGAATGCTGCGGCAAATGT
TGCCCGCAAGACGTAACCCCTCCCCTCCCCTCACCATTCCGTCCCGGCCT
GCCTCCCTCCTTCAAAGCATTTCAAATGACATCAACAGGAATGTTCATGC
TTTACCATGTCCGTCGAAAACGGGACAGAGGCTCAGGTTTAGGAGGGAGT
ACTTGAACGACGGAGAGAGGTCCGGGCGTGGCAGCTGTTGCGCGGGAGGC
ACGCGAGATTTGAATACCTTTCCGCGCGCTGGGTGAACGCCGCCAGGGAC
ATCGAGGAGAAGCAGAGGCAGACGCGAATGTTTGTGACGCACGAGACGTG
CACTGATCGATTGCTATGGTCGTTTCGGTCCCCAGTCGGCAAGGGAAAAA
ACAACAGG
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Coding sequence (CDS) from alignment at P-canaliculata_contig100:32500..37957-

>mRNA_P-canaliculata_contig100.48.1 ID=mRNA_P-canaliculata_contig100.48.1|Name=mRNA_P-canaliculata_contig100.48.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=3096bp|location=Sequence derived from alignment at P-canaliculata_contig100:32500..37957- (Pelvetia canaliculata dioecious)
ATGACGTCATCCATGGGCTCCGTCGACGCCAAGGCACGCAACATATGACG
TCATCCATGGGCTCCGTCGACGCCAAGGCACGCAACATTTTGCAGGAGGT
CGTGCACCTGGTCGCTACCTCTGGCAAGGATACCCGACTGCCGGTCAAGA
AGATTCTGCCGCACGCCTGCGCCAACCGCGACGTCGACAGTTTGCAGGAG
GTCGTGCACCTGGTCGCTACCTCTGGCAAGGATACCCGACTGCCGGTCAA
GAAGATTCTGCCGCACGCCTGCGCCAACCGCGACGTCGACAGATGCGTCT
CCTTGCTGGAGACAATGGTGAGCCTCGGGCAGAGCGCTGCTCTCCAGCTG
CTGTGGCTGTACGAGCGCTACGACGTGCCTGATGCCGGCGGCAGTATGAC
GAAGTGTGCGTATGACCACTTCGGAAGAGACTTAGGCAAGATGAGGCATC
TGTTCGCTTTCCTTGCCGTGCATGCGTCTCCTTGCTGGAGACAATGGTGA
GCCTCGGGCAGAGCGCTGCTCTCCAGCTGCTGTGGCTGTACGAGCGCTAC
GACGTGCCTGATGCCGGCGGCAGTATGACGAAGTGTGCGTATGACCACTT
CGGAAGAGACTTAGGCAAGATGAGGCATCTGTTCGCTTTCCTTGCCGTGC
GCAAGATTGAGGAGATTATCGGTATGGCTGGACTGGACAAGAAAGCCCTG
GCTCTCCAGCTAGCAGACTGGGATCCTATTGAAAAAGTCCAGGCAAGATT
GAGGAGATTATCGGTATGGCTGGACTGGACAAGAAAGCCCTGGCTCTCCA
GCTAGCAGACTGGGATCCTATTGAAAAAGTCCAGGTTCTTACAGCCTGGG
AGGCCGCACACCCCAAGATGAGTGCCGATGACTTGGTTAGCCTCATCCGA
CAAGACCAGGTTCTTACAGCCTGGGAGGCCGCACACCCCAAGATGAGTGC
CGATGACTTGGTTAGCCTCATCCGACAAGACCAGGCACGTGGCGGAGATA
AATTGGGGAGCCTTTGGCGCTGTTCTCTCAGCTCCATCAAGCGCGAGTTG
GAAATGGAAGCGAAGTTGAAGTGGGATGTGCACCGCTGGAAAGGCCGTAC
GGTCAGCGCTGGCACGTGGCGGAGATAAATTGGGGAGCCTTTGGCGCTGT
TCTCTCAGCTCCATCAAGCGCGAGTTGGAAATGGAAGCGAAGTTGAAGTG
GGATGTGCACCGCTGGAAAGGCCGTACGGTCAGCGCTGATATGCTTTACA
GCTCCCGTTTAGAGAGTAGAGGGGCGATAGATGTGTATCGTTCGCCGCAC
GAAAGCCCGTTCGGTTTTGCTCCGCCGCGGAAAACGGGGTTGAACGACCG
ACGAAGATGGGCACCAGAGCGGAACGTGAGGGCAGGGACAAAAACAGAGA
AGCCACCGTCGAGAGAGCCGTGCGGCAGTTTTGAGGTTAGCGACGCTACC
GGTGCCTGCACCAGCATCAACATTAGCAGCGCACGAAGCGTTATCAACGA
GGCCGACAATGAGGCCCTTGTCAAGAAGACTCCTCCCCGGCACCACCGAC
ATCAAAGCCCAGCGGGCCTGGGGGAAAACACAGGCGTGAGAGGAGACTTA
CCGCCACGGCTGACGTTGCCGACACCTACGTATGCCGGCAGGGAGTTTGA
CCCGTGTCGTCTGTGCAAGGCCTGCACAATTGAGTGGCGTAGCGCGATCG
TTCTCAGAGGGCACGACCTGCAGCTTTGGCACGCGGTGGACGACGAGAGG
AGGGCATTACTGGAGCTGCAGCGGCGAAATGATATCTTCAAAGCCGAGTG
GGCAAAGACCGAGTGGAGAGACCGACAGATATGCTTTACAGCTCCCGTTT
AGAGAGTAGAGGGGCGATAGATGTGTATCGTTCGCCGCACGAAAGCCCGT
TCGGTTTTGCTCCGCCGCGGAAAACGGGGTTGAACGACCGACGAAGATGG
GCACCAGAGCGGAACGTGAGGGCAGGGACAAAAACAGAGAAGCCACCGTC
GAGAGAGCCGTGCGGCAGTTTTGAGGTTAGCGACGCTACCGGTGCCTGCA
CCAGCATCAACATTAGCAGCGCACGAAGCGTTATCAACGAGGCCGACAAT
GAGGCCCTTGTCAAGAAGACTCCTCCCCGGCACCACCGACATCAAAGCCC
AGCGGGCCTGGGGGAAAACACAGGCGTGAGAGGAGACTTACCGCCACGGC
TGACGTTGCCGACACCTACGTATGCCGGCAGGGAGTTTGACCCGTGTCGT
CTGTGCAAGGCCTGCACAATTGAGTGGCGTAGCGCGATCGTTCTCAGAGG
GCACGACCTGCAGCTTTGGCACGCGGTGGACGACGAGAGGAGGGCATTAC
TGGAGCTGCAGCGGCGAAATGATATCTTCAAAGCCGAGTGGGCAAAGACC
GAGTGGAGAGACCGACAGGTATCCGAGCTCTTGCGCTTCATCTTCGAAGC
CAATCTCGACTCCTTCAGCCGCCACAGTTTGGAGGAGCGGGGAAAGGCTG
CGCGTAGCACGCAGGTATCCGAGCTCTTGCGCTTCATCTTCGAAGCCAAT
CTCGACTCCTTCAGCCGCCACAGTTTGGAGGAGCGGGGAAAGGCTGCGCG
TAGCACGCAGTCTGGGGAACTACGACGGATGCTAGACTTGAAGCTGTCCT
ACAAGGCTGCGGGGAAGAATGGCGCGGCCAAAGACGAAGGGCTAAAACGC
TTGAGCGAAAGACGGGCAAGGACGTGGGCCTCCACCTTGAGTCTGGGGAA
CTACGACGGATGCTAGACTTGAAGCTGTCCTACAAGGCTGCGGGGAAGAA
TGGCGCGGCCAAAGACGAAGGGCTAAAACGCTTGAGCGAAAGACGGGCAA
GGACGTGGGCCTCCACCTTGAGGTTGAAGGCATCTCTCAACCTAGACAGA
CATTACGCGTCTCTTGAGCCCGGAGACTTCCCACGTCACTCGAGAGGAGG
CACAATACGTCCACGAAGCGCTTCGATTTTCTAGGTTGAAGGCATCTCTC
AACCTAGACAGACATTACGCGTCTCTTGAGCCCGGAGACTTCCCACGTCA
CTCGAGAGGAGGCACAATACGTCCACGAAGCGCTTCGATTTTCTAG
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