mRNA_M-pyrifera_M_contig12457.4992.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12457.4992.1 vs. uniprot
Match: D7FJC2_ECTSI (Telomerase reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJC2_ECTSI) HSP 1 Score: 305 bits (782), Expect = 1.440e-102 Identity = 160/217 (73.73%), Postives = 176/217 (81.11%), Query Frame = 1
Query: 1 GKGEGLDGRWMLKLVYPNATSLGPYLEAWLRDIVAAS-PASASATVIDSFGGPASYLSRPDDQPEFKQMVEETLVAFCAPLGALLPNEDRAPLPRYASLQHSSSMADLLDRVVRSLLRSPSTT-QGCNANRYSAGQGYDPRRNVLSLGCRVAGPQARSELLSVQGVACTFPNTTVNVIRSPPWELLLSRIGDDLMFLLLRQHAVLQRLPNRCYMQAR 645
GKG+ DGRWMLKL+YPNA +L YLE WL+ + AA+ P SAS I+ GGPASYLSR DD PE+K+M++ETLVAF +P E APLPR+ASLQH SSMADLLDRVV+SLLRS + QG + Y A QG DPRRNVLSLGCRVAGPQA SELLSVQGVACTFPNTTVNVIRSPPWELLLSRIGDDLMF LLRQHAVLQRLPNRCYMQAR
Sbjct: 13 GKGQSPDGRWMLKLIYPNAVNLDSYLEVWLQAVAAAAAPGSASLAAIEGCGGPASYLSRQDDGPEYKKMLKETLVAFHPSPVQAVPGEAHAPLPRHASLQHRSSMADLLDRVVQSLLRSSTVGGQGNSVGGYYAAQGDDPRRNVLSLGCRVAGPQATSELLSVQGVACTFPNTTVNVIRSPPWELLLSRIGDDLMFALLRQHAVLQRLPNRCYMQAR 229
BLAST of mRNA_M-pyrifera_M_contig12457.4992.1 vs. uniprot
Match: D7G237_ECTSI (Telomerase reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G237_ECTSI) HSP 1 Score: 304 bits (778), Expect = 1.610e-94 Identity = 159/216 (73.61%), Postives = 175/216 (81.02%), Query Frame = 1
Query: 1 GKGEGLDGRWMLKLVYPNATSLGPYLEAWLRDIVAAS-PASASATVIDSFGGPASYLSRPDDQPEFKQMVEETLVAFCAPLGALLPNEDRAPLPRYASLQHSSSMADLLDRVVRSLLRSPSTT-QGCNANRYSAGQGYDPRRNVLSLGCRVAGPQARSELLSVQGVACTFPNTTVNVIRSPPWELLLSRIGDDLMFLLLRQHAVLQRLPNRCYMQA 642
GKG+ DGRWMLKL+YPNA +L YLE WL+ + AA+ P SAS I+ GGPASYLSR DD PE+K+M++ETLVAF +P E APLPR+ASLQH SSMADLLDRVV+SLLRS + QG + Y A QG DPRRNVLSLGCRVAGPQA SELLSVQGVACTFPNTTVNVIRSPPWELLLSRIGDDLMF LLRQHAVLQRLPNRCYMQA
Sbjct: 13 GKGQSPDGRWMLKLIYPNAVNLDSYLEVWLQAVAAAAAPGSASLAAIEGCGGPASYLSRQDDGPEYKKMLKETLVAFHPSPVQAVPGEAHAPLPRHASLQHRSSMADLLDRVVQSLLRSSTVGGQGNSVGGYYAAQGDDPRRNVLSLGCRVAGPQATSELLSVQGVACTFPNTTVNVIRSPPWELLLSRIGDDLMFALLRQHAVLQRLPNRCYMQA 228
BLAST of mRNA_M-pyrifera_M_contig12457.4992.1 vs. uniprot
Match: D7G4G7_ECTSI (Telomerase reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G7_ECTSI) HSP 1 Score: 297 bits (761), Expect = 5.240e-90 Identity = 157/216 (72.69%), Postives = 173/216 (80.09%), Query Frame = 1
Query: 1 GKGEGLDGRWMLKLVYPNATSLGPYLEAWLRDIVAAS-PASASATVIDSFGGPASYLSRPDDQPEFKQMVEETLVAFCAPLGALLPNEDRAPLPRYASLQHSSSMADLLDRVVRSLLRSPSTT-QGCNANRYSAGQGYDPRRNVLSLGCRVAGPQARSELLSVQGVACTFPNTTVNVIRSPPWELLLSRIGDDLMFLLLRQHAVLQRLPNRCYMQA 642
GKG+ DGRWMLKL+YPNA +L YL WL+ + AA+ P SAS I+ GGPASYLSR DD PE+K+M++ETLVAF +P E APLPR+ASLQH SSMADLLDRVV+SLLRS + QG + Y A QG DPRRNVLSLGCRVAGPQA SELLSVQGVACTFPNTTVNVIRSPPWELLLSRIGDDLMF LLRQHAVLQRLPNR YMQA
Sbjct: 13 GKGQSPDGRWMLKLIYPNAVNLDSYLGVWLQAVAAAAAPGSASLAAIEGCGGPASYLSRQDDGPEYKKMLKETLVAFHPSPVQAVPGEAHAPLPRHASLQHRSSMADLLDRVVKSLLRSSTVGGQGNSVGGYYAAQGDDPRRNVLSLGCRVAGPQATSELLSVQGVACTFPNTTVNVIRSPPWELLLSRIGDDLMFALLRQHAVLQRLPNRWYMQA 228
BLAST of mRNA_M-pyrifera_M_contig12457.4992.1 vs. uniprot
Match: A0A0D2UNU5_CAPO3 (Telomerase reverse transcriptase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UNU5_CAPO3) HSP 1 Score: 76.6 bits (187), Expect = 1.590e-12 Identity = 55/174 (31.61%), Postives = 82/174 (47.13%), Query Frame = 1
Query: 124 SATVIDSFGGPASYLS--RPDDQPEFKQMVEETLVAFCAPLGALLPNEDRAPLPRYASLQHSSSMADLLDRVVRSLLRSPSTTQGCNANRYSAGQGYDPRRNVLSLGCRVAGPQARSELLSVQGVACTFPNTTVNVIRSPPWELLLSRIGDDLMFLLLRQHAVLQRLPNRCYMQ 639
S++ SF P + R DD E++ ++ TLVAF P +P R A S + +LL+R++ L R + + GY RN + + S+ GV FPNTT+N +++ PWELLL+R+GD ++ LL +V RL N CYMQ
Sbjct: 131 SSSAFSSFRRPRALPQPLRADDPQEYQHLLTTTLVAFS-------PGVPISPFKRGADFSQSCTQEELLNRLLELLFREHQPS-------HVLAPGYRKMRN---------NDKVLGTVNSLYGVENYFPNTTLNYLKTLPWELLLARMGDSVVLHLLLSASVFVRLNNGCYMQ 281
BLAST of mRNA_M-pyrifera_M_contig12457.4992.1 vs. uniprot
Match: A0A8J9S211_9CHLO (Probable telomerase reverse transcriptase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S211_9CHLO) HSP 1 Score: 73.9 bits (180), Expect = 1.370e-11 Identity = 46/129 (35.66%), Postives = 69/129 (53.49%), Query Frame = 1
Query: 256 NEDRAPLPRYASLQHSSSMADLLDRVVRSLLRSPSTTQGCNANRYSAGQGYDPRRNVLSLGCRVAGPQARSE-LLSVQGVACTFPNTTVNVIRSPPWELLLSRIGDDLMFLLLRQHAVLQRLPNRCYMQ 639
N++ L +LQ SS ++L+R + +L+R+P G D RNVL LG R P +R+ + + G PNTT ++++ PW+LLLSRIGD LM LL ++ LPN C++Q
Sbjct: 72 NDNALELKGRFTLQQHSSQLEILNRAIDALVRAP---------------GGD--RNVLCLGFRKKRPSSRAAPSVGLFGTEAHHPNTTTDLLKGEPWQLLLSRIGDTLMLYLLMHTSLFLPLPNGCFLQ 183
BLAST of mRNA_M-pyrifera_M_contig12457.4992.1 vs. uniprot
Match: UPI00109BA176 (telomerase reverse transcriptase n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BA176) HSP 1 Score: 65.5 bits (158), Expect = 1.020e-8 Identity = 45/170 (26.47%), Postives = 79/170 (46.47%), Query Frame = 1
Query: 130 TVIDSFGGPASYLSRPDDQPEFKQMVEETLVAFCAPLGALLPNEDRAPLPRYASLQHSSSMADLLDRVVRSLLRSPSTTQGCNANRYSAGQGYDPRRNVLSLGCRVAGPQARSELLSVQGVACTFPNTTVNVIRSPPWELLLSRIGDDLMFLLLRQHAVLQRLPNRCYMQ 639
T+ID + P+DQ +K ++E+T+V + + DR P ++ H + +++ R++++ C++ S NVLSLG VA + S+ + + PN+ V + S W+ L R+GDDLM LL+ A+ ++ CYMQ
Sbjct: 16 TLIDYLAEVQDKIYHPNDQSNYKDLLEKTIVCY---------HGDR-PANIALNVMHGFGIEEVIQRIIKT---------SCHSKGGSTS-------NVLSLGYEVARDKPNSQ--ATNSIFNEHPNSNVRFLMSKVWQTLYDRVGDDLMIHLLKDVALFVKVGTSCYMQ 157
BLAST of mRNA_M-pyrifera_M_contig12457.4992.1 vs. uniprot
Match: A0A507F327_9FUNG (Telomerase reverse transcriptase n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507F327_9FUNG) HSP 1 Score: 60.1 bits (144), Expect = 6.740e-7 Identity = 42/155 (27.10%), Postives = 69/155 (44.52%), Query Frame = 1
Query: 175 PDDQPEFKQMVEETLVAFCAPLGALLPNEDRAPLPRYASLQHSSSMADLLDRVVRSLLRSPSTTQGCNANRYSAGQGYDPRRNVLSLGCRVAGPQARSELLSVQGVACTFPNTTVNVIRSPPWELLLSRIGDDLMFLLLRQHAVLQRLPNRCYMQ 639
P D P++ ++ T+VA E + PLP + S +++++ + +L+ GC D NVL+ G R + + + G+ FPNT VN +++P WE+LL RIG M LL + L + CY+Q
Sbjct: 37 PGDPPKYHHFLKTTMVARSL--------ESKEPLPPSQG-EVIFSQSEIVNSAIEKILK------GC-----------DGAANVLTFGYRKLSGKGGNRVTGTHGIENFFPNTIVNYVKAPVWEMLLGRIGVRAMTDLLLNTTMFMTLQDGCYVQ 165
BLAST of mRNA_M-pyrifera_M_contig12457.4992.1 vs. uniprot
Match: UPI00201EDD2C (telomerase reverse transcriptase-like isoform X1 n=6 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201EDD2C) HSP 1 Score: 57.4 bits (137), Expect = 5.490e-6 Identity = 44/153 (28.76%), Postives = 64/153 (41.83%), Query Frame = 1
Query: 181 DQPEFKQMVEETLVAFCAPLGALLPNEDRAPLPRYASLQHSSSMADLLDRVVRSLLRSPSTTQGCNANRYSAGQGYDPRRNVLSLGCRVAGPQARSELLSVQGVACTFPNTTVNVIRSPPWELLLSRIGDDLMFLLLRQHAVLQRLPNRCYMQ 639
D P + + LVA G LP SL S +++ RV+ L R N N NVL+LG ++ + + + FPN+ N ++ PW+ LLSRIGD LM LLL + +V +P Y+Q
Sbjct: 53 DPPGYVNFLHNALVAEMESQGGQLPT----------SLSQVSHQREVILRVIERLRRK-------NVN------------NVLTLGFGAMSDNPKAHISHIPSLEYRFPNSAFNRLQYSPWKTLLSRIGDQLMSLLLERTSVFYLVPPSNYVQ 176
BLAST of mRNA_M-pyrifera_M_contig12457.4992.1 vs. uniprot
Match: UPI0018F54C66 (LOW QUALITY PROTEIN: telomerase reverse transcriptase n=1 Tax=Tachyglossus aculeatus TaxID=9261 RepID=UPI0018F54C66) HSP 1 Score: 55.5 bits (132), Expect = 2.500e-5 Identity = 44/160 (27.50%), Postives = 70/160 (43.75%), Query Frame = 1
Query: 166 LSRPDDQPEFKQMVEETLVAFCAPLGALLPNEDRAPLPRYASLQHSSSMADLLDRVVRSLLRSPSTTQGCNANRYSAGQGYDPRRNVLSLGCRVAGPQARSELLSVQGVACTF-PNTTVNVIR-SPPWELLLSRIGDDLMFLLLRQHAVLQRLPNRCYMQ 639
L P D ++ + + +V C P GA PLP + + SS +++ R+V+ + C R +NVL+ G + +RSE + C + PN + IR S WE+L SR+GDD++ LL A+ +P C Q
Sbjct: 45 LGGPGDPEIYQTFLAQCVV--CVPRGA-------RPLPNPLTFRQLSSQKEIVARIVQRI---------CEKGR----------KNVLAFGYTLLDENSRSEPVVFTSNVCNYLPNISTETIRTSILWEMLFSRVGDDVIMYLLEHCALFMLVPPNCSYQ 176
BLAST of mRNA_M-pyrifera_M_contig12457.4992.1 vs. uniprot
Match: A0A226PBI3_COLVI (Telomerase reverse transcriptase n=1 Tax=Colinus virginianus TaxID=9014 RepID=A0A226PBI3_COLVI) HSP 1 Score: 53.9 bits (128), Expect = 7.480e-5 Identity = 51/179 (28.49%), Postives = 78/179 (43.58%), Query Frame = 1
Query: 106 ASPASASATVIDSFGGPASYLSRPDDQPEFKQMVEETLVAFCAPLGALLPNEDRAPLPRYASLQHSSSMADLLDRVVRSLLRSPSTTQGCNANRYSAGQGYDPRRNVLSLGCRVAGPQA-RSELLSVQGVACTFPNTTVNVIR-SPPWELLLSRIGDDLMFLLLRQHAVLQRLP-NRCY 633
A+P A + G + R DD ++ V + +V C P GA RA +PR Q SS ++++ R+V+ L C + +N+L+ G + + +L + PNT IR S WE+LLSRIGDD+M LL A+ +P + CY
Sbjct: 37 ATPLEAFVRRLQEGGAGEVEVLRGDDAQCYRTFVSQCVV--CVPRGA------RA-IPRPICFQQLSSQSEVITRIVQRL---------CEKKK----------KNILAYGYSLLDENSCHFRILPSSCIYSYLPNTVTETIRISALWEMLLSRIGDDVMMYLLEHCALFMLVPPSNCY 187 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12457.4992.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12457.4992.1 >prot_M-pyrifera_M_contig12457.4992.1 ID=prot_M-pyrifera_M_contig12457.4992.1|Name=mRNA_M-pyrifera_M_contig12457.4992.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=213bp MLKLVYPNATSLGPYLEAWLRDIVAASPASASATVIDSFGGPASYLSRPDback to top mRNA from alignment at M-pyrifera_M_contig12457:1774..3873+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12457.4992.1 ID=mRNA_M-pyrifera_M_contig12457.4992.1|Name=mRNA_M-pyrifera_M_contig12457.4992.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2100bp|location=Sequence derived from alignment at M-pyrifera_M_contig12457:1774..3873+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12457:1774..3873+ >mRNA_M-pyrifera_M_contig12457.4992.1 ID=mRNA_M-pyrifera_M_contig12457.4992.1|Name=mRNA_M-pyrifera_M_contig12457.4992.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1278bp|location=Sequence derived from alignment at M-pyrifera_M_contig12457:1774..3873+ (Macrocystis pyrifera P11B4 male)back to top |