prot_M-pyrifera_M_contig124495.4987.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124495.4987.1
Unique Nameprot_M-pyrifera_M_contig124495.4987.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length65
Homology
BLAST of mRNA_M-pyrifera_M_contig124495.4987.1 vs. uniprot
Match: A0A1M2VIU6_TRAPU (Coatomer subunit alpha (Fragment) n=4 Tax=Trametes TaxID=5324 RepID=A0A1M2VIU6_TRAPU)

HSP 1 Score: 68.6 bits (166), Expect = 5.920e-12
Identity = 31/57 (54.39%), Postives = 38/57 (66.67%), Query Frame = 0
Query:    2 AASLHSGTVLILDYLRGVVVDSLSAHTGPVRGVCFHPVQEGTLATGGDDYKVVVWDV 58
            AASLH+G+V + +Y  GV+VD    H GPVR V  HP     L TGGDDYK+ VWD+
Sbjct:   48 AASLHNGSVQLWNYRMGVLVDRFEEHEGPVRAVAIHP-SRALLCTGGDDYKIKVWDI 103          
BLAST of mRNA_M-pyrifera_M_contig124495.4987.1 vs. uniprot
Match: A0A812TJ18_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812TJ18_9DINO)

HSP 1 Score: 64.7 bits (156), Expect = 7.720e-12
Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    1 VAASLHSGTVLILDYLRGVVVDSLSAHTG-PVRGVCFHPVQEGTLATGGDDYKVVVWDVAQRRPRF 65
            + ASLH+GT+ + DY  G ++D    H G PVRG+CFH + +    +GGDDYK+ VW+   RR  F
Sbjct:   33 ILASLHNGTIQLWDYRIGSLIDKFEEHEGGPVRGICFH-LSQPLFVSGGDDYKIKVWNYKLRRCIF 97          
BLAST of mRNA_M-pyrifera_M_contig124495.4987.1 vs. uniprot
Match: A0A5A8DF99_CAFRO (Uncharacterized protein n=7 Tax=Sar TaxID=2698737 RepID=A0A5A8DF99_CAFRO)

HSP 1 Score: 65.9 bits (159), Expect = 5.280e-11
Identity = 28/65 (43.08%), Postives = 39/65 (60.00%), Query Frame = 0
Query:    1 VAASLHSGTVLILDYLRGVVVDSLSAHTGPVRGVCFHPVQEGTLATGGDDYKVVVWDVAQRRPRF 65
            + ASLH G V + DY  G  ++  + H GPVRG+  HP  +    +GGDDY + VW +AQR+  F
Sbjct:   24 ILASLHDGIVQLWDYRNGTCIERFAGHEGPVRGLDVHPSGQPLFVSGGDDYLIKVWSLAQRKCLF 88          
BLAST of mRNA_M-pyrifera_M_contig124495.4987.1 vs. uniprot
Match: A0A7S4RUA4_9DINO (Coatomer subunit alpha n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RUA4_9DINO)

HSP 1 Score: 65.5 bits (158), Expect = 7.210e-11
Identity = 33/66 (50.00%), Postives = 41/66 (62.12%), Query Frame = 0
Query:    1 VAASLHSGTVLILDYLRGVVVDSLSAHTG-PVRGVCFHPVQEGTLATGGDDYKVVVWDVAQRRPRF 65
            V ASLH+GT+ + DY  G ++D    H G PVRGVCFH  Q     +GGDDYK+ VW+   RR  F
Sbjct:   41 VLASLHNGTIQLWDYRIGSMIDKFEEHEGGPVRGVCFHASQP-LFVSGGDDYKIKVWNYKLRRCIF 105          
BLAST of mRNA_M-pyrifera_M_contig124495.4987.1 vs. uniprot
Match: A0A427Y3N5_9TREE (Coatomer subunit alpha n=1 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427Y3N5_9TREE)

HSP 1 Score: 65.5 bits (158), Expect = 7.220e-11
Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    2 AASLHSGTVLILDYLRGVVVDSLSAHTGPVRGVCFHPVQEGTLATGGDDYKV 53
            AASLH+GT+ + +Y  G +VD    H GPVRG+CFHP Q     +GGDDYK+
Sbjct:   70 AASLHNGTIQLWNYQMGTLVDRYDEHDGPVRGICFHPTQP-IFCSGGDDYKI 120          
BLAST of mRNA_M-pyrifera_M_contig124495.4987.1 vs. uniprot
Match: A0A812YMX2_9DINO (Hypothetical protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812YMX2_9DINO)

HSP 1 Score: 64.7 bits (156), Expect = 7.710e-11
Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    1 VAASLHSGTVLILDYLRGVVVDSLSAHTG-PVRGVCFHPVQEGTLATGGDDYKVVVWDVAQRRPRF 65
            + ASLH+GT+ + DY  G ++D    H G PVRG+CFH + +    +GGDDYK+ VW+   RR  F
Sbjct:   11 ILASLHNGTIQLWDYRIGSLIDKFEEHEGGPVRGICFH-LSQPLFVSGGDDYKIKVWNYKLRRCIF 75          
BLAST of mRNA_M-pyrifera_M_contig124495.4987.1 vs. uniprot
Match: A0A813JAL1_POLGL (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JAL1_POLGL)

HSP 1 Score: 65.1 bits (157), Expect = 9.690e-11
Identity = 32/66 (48.48%), Postives = 41/66 (62.12%), Query Frame = 0
Query:    1 VAASLHSGTVLILDYLRGVVVDSLSAHTG-PVRGVCFHPVQEGTLATGGDDYKVVVWDVAQRRPRF 65
            + ASLH+GT+ + DY  G ++D    H G PVRGVCFH  Q     +GGDDYK+ VW+   RR  F
Sbjct:   24 ILASLHNGTIQLWDYRIGSLIDKFEEHEGGPVRGVCFHLTQP-LFVSGGDDYKIKVWNYKLRRCIF 88          
BLAST of mRNA_M-pyrifera_M_contig124495.4987.1 vs. uniprot
Match: A0A813DJ04_POLGL (Coatomer subunit alpha n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DJ04_POLGL)

HSP 1 Score: 65.1 bits (157), Expect = 9.860e-11
Identity = 32/66 (48.48%), Postives = 41/66 (62.12%), Query Frame = 0
Query:    1 VAASLHSGTVLILDYLRGVVVDSLSAHTG-PVRGVCFHPVQEGTLATGGDDYKVVVWDVAQRRPRF 65
            + ASLH+GT+ + DY  G ++D    H G PVRGVCFH  Q     +GGDDYK+ VW+   RR  F
Sbjct:   24 ILASLHNGTIQLWDYRIGSLIDKFEEHEGGPVRGVCFHLTQP-LFVSGGDDYKIKVWNYKLRRCIF 88          
BLAST of mRNA_M-pyrifera_M_contig124495.4987.1 vs. uniprot
Match: A0A812JC94_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812JC94_9DINO)

HSP 1 Score: 64.7 bits (156), Expect = 1.310e-10
Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    1 VAASLHSGTVLILDYLRGVVVDSLSAHTG-PVRGVCFHPVQEGTLATGGDDYKVVVWDVAQRRPRF 65
            + ASLH+GT+ + DY  G ++D    H G PVRG+CFH + +    +GGDDYK+ VW+   RR  F
Sbjct:   18 ILASLHNGTIQLWDYRIGSLIDKFEEHEGGPVRGICFH-LSQPLFVSGGDDYKIKVWNYKLRRCIF 82          
BLAST of mRNA_M-pyrifera_M_contig124495.4987.1 vs. uniprot
Match: A0A1Q9DJU2_SYMMI (Coatomer subunit alpha-1 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9DJU2_SYMMI)

HSP 1 Score: 64.7 bits (156), Expect = 1.340e-10
Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    1 VAASLHSGTVLILDYLRGVVVDSLSAHTG-PVRGVCFHPVQEGTLATGGDDYKVVVWDVAQRRPRF 65
            + ASLH+GT+ + DY  G ++D    H G PVRG+CFH + +    +GGDDYK+ VW+   RR  F
Sbjct:   24 ILASLHNGTIQLWDYRIGSLIDKFEEHEGGPVRGICFH-LSQPLFVSGGDDYKIKVWNYKLRRCIF 88          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124495.4987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1M2VIU6_TRAPU5.920e-1254.39Coatomer subunit alpha (Fragment) n=4 Tax=Trametes... [more]
A0A812TJ18_9DINO7.720e-1245.45Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A5A8DF99_CAFRO5.280e-1143.08Uncharacterized protein n=7 Tax=Sar TaxID=2698737 ... [more]
A0A7S4RUA4_9DINO7.210e-1150.00Coatomer subunit alpha n=1 Tax=Alexandrium monilat... [more]
A0A427Y3N5_9TREE7.220e-1153.85Coatomer subunit alpha n=1 Tax=Saitozyma podzolica... [more]
A0A812YMX2_9DINO7.710e-1145.45Hypothetical protein n=1 Tax=Symbiodinium necroapp... [more]
A0A813JAL1_POLGL9.690e-1148.48Peptide-methionine (S)-S-oxide reductase n=1 Tax=P... [more]
A0A813DJ04_POLGL9.860e-1148.48Coatomer subunit alpha n=2 Tax=Polarella glacialis... [more]
A0A812JC94_9DINO1.310e-1045.45Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A1Q9DJU2_SYMMI1.340e-1045.45Coatomer subunit alpha-1 n=1 Tax=Symbiodinium micr... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 17..57
e-value: 1.4E-7
score: 41.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 24..65
score: 11.745
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..65
e-value: 1.9E-15
score: 58.4
NoneNo IPR availablePANTHERPTHR19876:SF29COATOMER SUBUNIT ALPHA-2coord: 2..62
NoneNo IPR availablePANTHERPTHR19876COATOMERcoord: 2..62
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 44..58
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..65
score: 12.13
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124495contigM-pyrifera_M_contig124495:182..376 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124495.4987.1mRNA_M-pyrifera_M_contig124495.4987.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124495 182..376 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124495.4987.1 ID=prot_M-pyrifera_M_contig124495.4987.1|Name=mRNA_M-pyrifera_M_contig124495.4987.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=65bp
VAASLHSGTVLILDYLRGVVVDSLSAHTGPVRGVCFHPVQEGTLATGGDD
YKVVVWDVAQRRPRF
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf