prot_M-pyrifera_M_contig124487.4984.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124487.4984.1
Unique Nameprot_M-pyrifera_M_contig124487.4984.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length163
Homology
BLAST of mRNA_M-pyrifera_M_contig124487.4984.1 vs. uniprot
Match: A0A060X6N2_ONCMY (L-lactate dehydrogenase n=2 Tax=Oncorhynchus TaxID=8016 RepID=A0A060X6N2_ONCMY)

HSP 1 Score: 172 bits (435), Expect = 9.200e-51
Identity = 82/150 (54.67%), Postives = 113/150 (75.33%), Query Frame = 0
Query:    5 SSVHGYIIGEHGDSAVPVWSGLSVGGVRLRSLNPEMGKESDPEHWGEVAKATIGAAQTVIAAKGYTNLAIGLTACAITNAILRNAHTIHPVSTLVQGLHGIEQQVFLSVPCVLGSSGVKSALALELEPQEEEQLRSSAETIHNAQAELDM 154
            SS HG+IIGEHGDS+VPVWSG++V GV L+ LNP+MG ++D E W  V K  +  A  VI  KGYT+ AIGL+   +  +IL+N H +HPVSTLV+G+HG++++VFLSVPCVLG+SG+   + + L+P+EE+QL +SAET+   Q EL +
Sbjct:  106 SSCHGWIIGEHGDSSVPVWSGVNVAGVSLKGLNPDMGTDADKEDWKHVHKMVVNGAYEVIKLKGYTSWAIGLSVADLVESILKNLHKVHPVSTLVKGMHGVKEEVFLSVPCVLGNSGLTDIIHMTLKPEEEKQLINSAETLWGVQKELTL 255          
BLAST of mRNA_M-pyrifera_M_contig124487.4984.1 vs. uniprot
Match: A0A437DB99_ORYJA (L-lactate dehydrogenase n=1 Tax=Oryzias javanicus TaxID=123683 RepID=A0A437DB99_ORYJA)

HSP 1 Score: 174 bits (440), Expect = 2.360e-50
Identity = 83/150 (55.33%), Postives = 111/150 (74.00%), Query Frame = 0
Query:    5 SSVHGYIIGEHGDSAVPVWSGLSVGGVRLRSLNPEMGKESDPEHWGEVAKATIGAAQTVIAAKGYTNLAIGLTACAITNAILRNAHTIHPVSTLVQGLHGIEQQVFLSVPCVLGSSGVKSALALELEPQEEEQLRSSAETIHNAQAELDM 154
            SS HG+IIGEHGDS+V VWSG++V GV L+ LNP+MG E D EHW EV K  +  A  VI  KGYT+ AIG++   +  ++++N H +HPVSTLVQGLHG++ +VFLSVPCVLGSSG+   + + L+P+EE+QL  SA+T+   Q EL +
Sbjct:  206 SSCHGWIIGEHGDSSVAVWSGVNVAGVSLQKLNPKMGAEDDGEHWKEVHKKVVDGAYEVIRLKGYTSWAIGMSVADLVESVMKNLHRVHPVSTLVQGLHGVKDEVFLSVPCVLGSSGLTDVVHMTLKPEEEQQLMKSADTLWGVQKELTL 355          
BLAST of mRNA_M-pyrifera_M_contig124487.4984.1 vs. uniprot
Match: A0A3B3ZRX0_9GOBI (L-lactate dehydrogenase n=2 Tax=Gobiidae TaxID=8220 RepID=A0A3B3ZRX0_9GOBI)

HSP 1 Score: 172 bits (437), Expect = 3.730e-50
Identity = 84/150 (56.00%), Postives = 111/150 (74.00%), Query Frame = 0
Query:    5 SSVHGYIIGEHGDSAVPVWSGLSVGGVRLRSLNPEMGKESDPEHWGEVAKATIGAAQTVIAAKGYTNLAIGLTACAITNAILRNAHTIHPVSTLVQGLHGIEQQVFLSVPCVLGSSGVKSALALELEPQEEEQLRSSAETIHNAQAELDM 154
            SS HG+IIGEHGDS+VPVWSG++V GV L++LNP MG ESD E+W EV    +  A  VI  KGYT+ AIGL+   +  +I++N H + PVSTLVQG+HG+ ++VFLSVPCVLG+SG+   + + L+P EE+QLR SAET+   Q EL +
Sbjct:  183 SSCHGWIIGEHGDSSVPVWSGVNVAGVSLQALNPNMGGESDSENWKEVHHQVVQGAYEVIKLKGYTSWAIGLSVADLVESIMKNLHKVQPVSTLVQGMHGVNEEVFLSVPCVLGNSGLTDVINMTLKPDEEQQLRKSAETLWGVQKELTL 332          
BLAST of mRNA_M-pyrifera_M_contig124487.4984.1 vs. uniprot
Match: A0A674CGG9_SALTR (L-lactate dehydrogenase n=8 Tax=Salmoninae TaxID=504568 RepID=A0A674CGG9_SALTR)

HSP 1 Score: 172 bits (435), Expect = 3.770e-50
Identity = 81/150 (54.00%), Postives = 113/150 (75.33%), Query Frame = 0
Query:    5 SSVHGYIIGEHGDSAVPVWSGLSVGGVRLRSLNPEMGKESDPEHWGEVAKATIGAAQTVIAAKGYTNLAIGLTACAITNAILRNAHTIHPVSTLVQGLHGIEQQVFLSVPCVLGSSGVKSALALELEPQEEEQLRSSAETIHNAQAELDM 154
            SS HG+IIGEHGDS+VPVWSG++V GV L+ LNP+MG ++D E W  V K  +  A  VI  KGYT+ AIG++   +  +IL+N H +HPVSTLV+G+HG++++VFLSVPCVLG+SG+   + + L+P+EE+QL +SAET+   Q EL +
Sbjct:  157 SSCHGWIIGEHGDSSVPVWSGVNVAGVSLKGLNPDMGTDADKEDWKHVHKMVVDGAYEVIKLKGYTSWAIGMSVADLVESILKNLHKVHPVSTLVKGMHGVKEEVFLSVPCVLGNSGLTDVIHMTLKPEEEKQLSNSAETLWGVQKELTL 306          
BLAST of mRNA_M-pyrifera_M_contig124487.4984.1 vs. uniprot
Match: A0A6F8ZQH7_9TELE (L-lactate dehydrogenase n=1 Tax=Coregonus sp. 'balchen' TaxID=861768 RepID=A0A6F8ZQH7_9TELE)

HSP 1 Score: 170 bits (431), Expect = 6.310e-50
Identity = 81/150 (54.00%), Postives = 112/150 (74.67%), Query Frame = 0
Query:    5 SSVHGYIIGEHGDSAVPVWSGLSVGGVRLRSLNPEMGKESDPEHWGEVAKATIGAAQTVIAAKGYTNLAIGLTACAITNAILRNAHTIHPVSTLVQGLHGIEQQVFLSVPCVLGSSGVKSALALELEPQEEEQLRSSAETIHNAQAELDM 154
            SS HG+IIGEHGDS+VPVWSG++V GV L+ LNP+MG ++D E W  V K  +  A  VI  KGYT+ AIG++   +  +IL+N H +HPVSTLV+G+HG++ +VFLSVPCVLG+SG+   + + L+P+EE+QL +SAET+   Q EL +
Sbjct:  125 SSCHGWIIGEHGDSSVPVWSGVNVAGVSLKGLNPDMGTDADKEDWKHVHKMVVDGAYEVIKLKGYTSWAIGMSVADLVESILKNLHKVHPVSTLVKGMHGVKDEVFLSVPCVLGNSGLTDVIHMTLKPEEEKQLINSAETLWGVQKELTL 274          
BLAST of mRNA_M-pyrifera_M_contig124487.4984.1 vs. uniprot
Match: A0A3P9LYZ5_ORYLA (L-lactate dehydrogenase n=3 Tax=Oryzias latipes TaxID=8090 RepID=A0A3P9LYZ5_ORYLA)

HSP 1 Score: 171 bits (432), Expect = 2.040e-49
Identity = 84/148 (56.76%), Postives = 108/148 (72.97%), Query Frame = 0
Query:    5 SSVHGYIIGEHGDSAVPVWSGLSVGGVRLRSLNPEMGKESDPEHWGEVAKATIGAAQTVIAAKGYTNLAIGLTACAITNAILRNAHTIHPVSTLVQGLHGIEQQVFLSVPCVLGSSGVKSALALELEPQEEEQLRSSAETIHNAQAEL 152
            SS HG+IIGEHGDS+V VWSG++V GV L+ LNP+MG E D E W +V K  +  A  VI  KGYT+ AIG++   +  ++LRN H +HPVSTLVQGLHG++ +VFLSVPCVLGS G+   + + L+ +EEEQLR SAET+   Q EL
Sbjct:  182 SSCHGWIIGEHGDSSVAVWSGVNVAGVSLQKLNPKMGAEDDGERWKDVHKKVVDGAYEVIRLKGYTSWAIGMSVADLVESLLRNLHRVHPVSTLVQGLHGVKDEVFLSVPCVLGSGGLTDVVHMTLKAEEEEQLRKSAETLWGVQKEL 329          
BLAST of mRNA_M-pyrifera_M_contig124487.4984.1 vs. uniprot
Match: A0A4W5PEA0_9TELE (L-lactate dehydrogenase n=2 Tax=Salmoninae TaxID=504568 RepID=A0A4W5PEA0_9TELE)

HSP 1 Score: 171 bits (432), Expect = 2.320e-49
Identity = 81/150 (54.00%), Postives = 113/150 (75.33%), Query Frame = 0
Query:    5 SSVHGYIIGEHGDSAVPVWSGLSVGGVRLRSLNPEMGKESDPEHWGEVAKATIGAAQTVIAAKGYTNLAIGLTACAITNAILRNAHTIHPVSTLVQGLHGIEQQVFLSVPCVLGSSGVKSALALELEPQEEEQLRSSAETIHNAQAELDM 154
            SS HG+IIGEHGDS+VPVWSG++V GV L+ LNP+MG ++D E W  V K  +  A  VI  KGYT+ AIG++   +  +IL+N H +HPVSTLV+G+HG++++VFLSVPCVLG+SG+   + + L+P+EE+QL +SAET+   Q EL +
Sbjct:  187 SSCHGWIIGEHGDSSVPVWSGVNVAGVSLKGLNPDMGTDADKEDWKHVHKMVVDGAYEVIKLKGYTSWAIGMSVADLVESILKNLHKVHPVSTLVKGMHGVKEEVFLSVPCVLGNSGLTDIIHMTLKPEEEKQLSNSAETLWAVQKELTL 336          
BLAST of mRNA_M-pyrifera_M_contig124487.4984.1 vs. uniprot
Match: W5MBG2_LEPOC (L-lactate dehydrogenase n=3 Tax=Lepisosteidae TaxID=7915 RepID=W5MBG2_LEPOC)

HSP 1 Score: 171 bits (432), Expect = 2.320e-49
Identity = 82/148 (55.41%), Postives = 112/148 (75.68%), Query Frame = 0
Query:    5 SSVHGYIIGEHGDSAVPVWSGLSVGGVRLRSLNPEMGKESDPEHWGEVAKATIGAAQTVIAAKGYTNLAIGLTACAITNAILRNAHTIHPVSTLVQGLHGIEQQVFLSVPCVLGSSGVKSALALELEPQEEEQLRSSAETIHNAQAEL 152
            SSVHGYI+GEHGDS+VPVWSG +V G+ L+SLNP++  + DPE W E+ K  + +A  VI  KGYT+ AIGL+  ++ N++L+N  T++P+STLV+G+HGI+++VFLSVPCVLGSSGV   L   L+  E  QL+ SAET+ N Q +L
Sbjct:  184 SSVHGYIVGEHGDSSVPVWSGTNVAGISLQSLNPQLESDQDPEGWKEIHKKVVDSAYEVIKLKGYTSWAIGLSVASLANSVLKNLKTVNPISTLVKGMHGIKEEVFLSVPCVLGSSGVCGVLKQPLKETETRQLQHSAETLWNVQKDL 331          
BLAST of mRNA_M-pyrifera_M_contig124487.4984.1 vs. uniprot
Match: A0A5C0ZU02_MICSA (L-lactate dehydrogenase (Fragment) n=8 Tax=Percomorphaceae TaxID=1489872 RepID=A0A5C0ZU02_MICSA)

HSP 1 Score: 169 bits (429), Expect = 2.570e-49
Identity = 81/150 (54.00%), Postives = 111/150 (74.00%), Query Frame = 0
Query:    5 SSVHGYIIGEHGDSAVPVWSGLSVGGVRLRSLNPEMGKESDPEHWGEVAKATIGAAQTVIAAKGYTNLAIGLTACAITNAILRNAHTIHPVSTLVQGLHGIEQQVFLSVPCVLGSSGVKSALALELEPQEEEQLRSSAETIHNAQAELDM 154
            SS HG+IIGEHGDS+VPVWSG++V GV L+SLNP+MG E D E W EV K  +  A  VI  KGYT+ AIG++   +  +IL+N H +HPVSTLVQG+HG++ +VFLS+PCVLG++G+   + + L+ +E++QL  SAET+   Q EL +
Sbjct:  151 SSCHGWIIGEHGDSSVPVWSGVNVAGVSLQSLNPQMGAEGDSEKWKEVHKMVVDGAYEVIKLKGYTSWAIGMSVADLVESILKNLHKVHPVSTLVQGMHGVKDEVFLSIPCVLGNNGLTDVIHMTLKDEEQKQLVKSAETLWGVQKELTL 300          
BLAST of mRNA_M-pyrifera_M_contig124487.4984.1 vs. uniprot
Match: A0A3Q3WYZ4_MOLML (L-lactate dehydrogenase n=4 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3Q3WYZ4_MOLML)

HSP 1 Score: 171 bits (432), Expect = 3.450e-49
Identity = 82/148 (55.41%), Postives = 112/148 (75.68%), Query Frame = 0
Query:    5 SSVHGYIIGEHGDSAVPVWSGLSVGGVRLRSLNPEMGKESDPEHWGEVAKATIGAAQTVIAAKGYTNLAIGLTACAITNAILRNAHTIHPVSTLVQGLHGIEQQVFLSVPCVLGSSGVKSALALELEPQEEEQLRSSAETIHNAQAEL 152
            SS HG+IIGEHGDS+VPVWSG++V GV L++LNP+MG E D E+W EV K  +  A  VI  KGYT+ AIG++   +  +I++N H +HPVSTLVQGLHG++++VFLS+P VLG+SG+   + + L+P+EE+QL  SAET+   Q EL
Sbjct:  203 SSCHGWIIGEHGDSSVPVWSGMNVAGVSLQALNPKMGAEGDSENWKEVHKKVVDGAYEVIKLKGYTSWAIGMSVADLVESIMKNLHKVHPVSTLVQGLHGVKEEVFLSIPSVLGNSGLTDIIHVMLKPEEEKQLMKSAETLWGVQKEL 350          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124487.4984.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A060X6N2_ONCMY9.200e-5154.67L-lactate dehydrogenase n=2 Tax=Oncorhynchus TaxID... [more]
A0A437DB99_ORYJA2.360e-5055.33L-lactate dehydrogenase n=1 Tax=Oryzias javanicus ... [more]
A0A3B3ZRX0_9GOBI3.730e-5056.00L-lactate dehydrogenase n=2 Tax=Gobiidae TaxID=822... [more]
A0A674CGG9_SALTR3.770e-5054.00L-lactate dehydrogenase n=8 Tax=Salmoninae TaxID=5... [more]
A0A6F8ZQH7_9TELE6.310e-5054.00L-lactate dehydrogenase n=1 Tax=Coregonus sp. 'bal... [more]
A0A3P9LYZ5_ORYLA2.040e-4956.76L-lactate dehydrogenase n=3 Tax=Oryzias latipes Ta... [more]
A0A4W5PEA0_9TELE2.320e-4954.00L-lactate dehydrogenase n=2 Tax=Salmoninae TaxID=5... [more]
W5MBG2_LEPOC2.320e-4955.41L-lactate dehydrogenase n=3 Tax=Lepisosteidae TaxI... [more]
A0A5C0ZU02_MICSA2.570e-4954.00L-lactate dehydrogenase (Fragment) n=8 Tax=Percomo... [more]
A0A3Q3WYZ4_MOLML3.450e-4955.41L-lactate dehydrogenase n=4 Tax=Percomorphaceae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022383Lactate/malate dehydrogenase, C-terminalPFAMPF02866Ldh_1_Ccoord: 1..148
e-value: 1.8E-16
score: 60.5
IPR015955Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminalGENE3D3.90.110.10coord: 1..154
e-value: 3.5E-58
score: 197.9
IPR015955Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminalSUPERFAMILY56327LDH C-terminal domain-likecoord: 1..151
NoneNo IPR availablePANTHERPTHR43128FAMILY NOT NAMEDcoord: 1..152
IPR018177L-lactate dehydrogenase, active sitePROSITEPS00064L_LDHcoord: 12..18

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124487contigM-pyrifera_M_contig124487:26..514 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124487.4984.1mRNA_M-pyrifera_M_contig124487.4984.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124487 26..514 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124487.4984.1 ID=prot_M-pyrifera_M_contig124487.4984.1|Name=mRNA_M-pyrifera_M_contig124487.4984.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=163bp
GVATSSVHGYIIGEHGDSAVPVWSGLSVGGVRLRSLNPEMGKESDPEHWG
EVAKATIGAAQTVIAAKGYTNLAIGLTACAITNAILRNAHTIHPVSTLVQ
GLHGIEQQVFLSVPCVLGSSGVKSALALELEPQEEEQLRSSAETIHNAQA
ELDMPEEGGSAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022383Lactate/malate_DH_C
IPR015955Lactate_DH/Glyco_Ohase_4_C
IPR018177L-lactate_DH_AS