prot_M-pyrifera_M_contig124471.4979.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124471.4979.1
Unique Nameprot_M-pyrifera_M_contig124471.4979.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length161
Homology
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Match: A0A1W2G6N9_9BACT (Cytochrome c-type biogenesis protein CcsB n=2 Tax=Reichenbachiella faecimaris TaxID=692418 RepID=A0A1W2G6N9_9BACT)

HSP 1 Score: 265 bits (677), Expect = 4.740e-80
Identity = 127/161 (78.88%), Postives = 145/161 (90.06%), Query Frame = 0
Query:    1 MPMYYQSIMQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELLYNKLKLFNHLFSFLWLTGLALLTVAILRIFKSESKAIEWSSRVLTALVFAGFMLLTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFVFYKKSNFVVPLGALFAGTLL 161
            +PMYYQSIM+S+ EKDW+ ADE LGY+K YQ IKGA+V+PE+GI+ AELLYNKLKLFNHLF +LWL+G+ALL VAIL+IFKSES+ I  +S VLT LVF  F+ LTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAF+FYKKSNFVVPLGALF+GTLL
Sbjct:  684 LPMYYQSIMESVREKDWAKADEVLGYIKKYQNIKGAEVLPESGIVKAELLYNKLKLFNHLFGYLWLSGIALLAVAILKIFKSESRGINIASNVLTGLVFVQFLALTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFIFYKKSNFVVPLGALFSGTLL 844          
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Match: A0A1M6LQ94_9BACT (Cytochrome c-type biogenesis protein CcsB n=4 Tax=Reichenbachiella TaxID=156993 RepID=A0A1M6LQ94_9BACT)

HSP 1 Score: 213 bits (541), Expect = 4.910e-61
Identity = 102/161 (63.35%), Postives = 127/161 (78.88%), Query Frame = 0
Query:    1 MPMYYQSIMQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELLYNKLKLFNHLFSFLWLTGLALLTVAILRIFKSESKAIEWSSRVLTALVFAGFMLLTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFVFYKKSNFVVPLGALFAGTLL 161
            MPMYYQS++++  +KDW+ ADETL Y++T+Q +KGA V+P + I  AELLYNKL+LFNHLFSF WLTG+ALL VAI  +F   +  ++ S   LTA+VF GF+ LTFNL LRWYA+ + PWSNGYEMIILV W L+ F F FY+KS+FVVPL ALFAGTLL
Sbjct:  683 MPMYYQSVLKASRDKDWTQADETLSYIRTFQNVKGAAVIPSSNIQRAELLYNKLRLFNHLFSFFWLTGIALLAVAIFSVFYPNNSLVDKSKIGLTAVVFVGFLALTFNLILRWYAAQYPPWSNGYEMIILVSWALMLFGFSFYRKSDFVVPLAALFAGTLL 843          
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Match: UPI000D6E2CCE (cytochrome c biogenesis protein CcsA n=1 Tax=Reichenbachiella versicolor TaxID=1821036 RepID=UPI000D6E2CCE)

HSP 1 Score: 164 bits (415), Expect = 6.430e-44
Identity = 83/164 (50.61%), Postives = 110/164 (67.07%), Query Frame = 0
Query:    1 MPMYYQSI---MQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELLYNKLKLFNHLFSFLWLTGLALLTVAILRIFKSESKAIEWSSRVLTALVFAGFMLLTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFVFYKKSNFVVPLGALFAGTLL 161
            +P+YY+S+    +S S++DW  AD+ LGY+ TYQ + G +V P  G    ELLYN+L LF  LF   W+ GL  L ++IL++F ++SK I+ S  VL   +   F+  TFN+ LRWYA  + PWSNGYEMIILV W L+ F FVF KKS+FV+PL  LF GTLL
Sbjct:  673 IPIYYRSVWMAQKSGSDEDWEQADQNLGYIATYQDVLGKEVSPSEGRRKGELLYNELNLFTKLFPIYWMLGLVALVLSILKVFYNKSKFIKVSLWVLVGAISLAFLAQTFNIILRWYAGDYPPWSNGYEMIILVSWFLMLFGFVFLKKSDFVLPLACLFTGTLL 836          
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Match: A0A6N6KDN0_9BACT (Cytochrome C biogenesis protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A6N6KDN0_9BACT)

HSP 1 Score: 155 bits (393), Expect = 5.920e-41
Identity = 80/161 (49.69%), Postives = 104/161 (64.60%), Query Frame = 0
Query:    1 MPMYYQSIMQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELLYNKLKLFNHLFSFLWLTGLALLTVAILRIFKSESKAIEWSSRVLTALVFAGFMLLTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFVFYKKSNFVVPLGALFAGTLL 161
            MP YY SI ++ +  DWS A + L Y+ TYQ + GA+V+P    + AEL YN+L LFN LF   WL G  LL +A+LR+F   +K I ++   L  L   GF+  TFNL LRWYA  + PWSNGYEM ILV W L+ F  VF +K++F VPL  LF+GTL+
Sbjct:  681 MPEYYASIDRAQASGDWSEAMKNLEYIHTYQQVIGAEVIPPPKRVAAELWYNELGLFNKLFPVYWLLGTFLLILAVLRVFFYNNKGINYTYVALIVLAGLGFIAHTFNLALRWYAGDYPPWSNGYEMTILVSWFLMLFGLVFMRKTDFAVPLAVLFSGTLM 841          
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Match: UPI00040F1F9D (cytochrome c biogenesis protein CcsA n=1 Tax=Algoriphagus mannitolivorans TaxID=226504 RepID=UPI00040F1F9D)

HSP 1 Score: 152 bits (385), Expect = 7.050e-40
Identity = 72/160 (45.00%), Postives = 105/160 (65.62%), Query Frame = 0
Query:    2 PMYYQSIMQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELLYNKLKLFNHLFSFLWLTGLALLTVAILRIFKSESKAIEWSSRVLTALVFAGFMLLTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFVFYKKSNFVVPLGALFAGTLL 161
            PMY Q++++ L   DW+ A+ETL Y+  YQ   G +V P   +I AELLY ++ L N LF   W+ G+ +L + I+R+FK ESK +E + +  T L + G+   TF+L LRW+ + H PWS+G+EM++ V WG+LFF  VF  KS F +PL  +F+GTLL
Sbjct:  667 PMYLQALLEGLESGDWTQAEETLSYIDLYQRKAGEEVYPNQTLIDAELLYTQINLGNRLFGAFWILGVLMLIIGIIRLFK-ESKILENTFKFGTLLAWIGWFTFTFHLALRWFIAKHPPWSDGFEMLVFVAWGILFFGLVFSSKSRFTIPLALIFSGTLL 825          
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Match: A0A0D3L8Q9_9BACT (ABC transporter involved in cytochrome c biogenesis permease n=1 Tax=Flammeovirgaceae bacterium 311 TaxID=1257021 RepID=A0A0D3L8Q9_9BACT)

HSP 1 Score: 152 bits (385), Expect = 7.060e-40
Identity = 75/160 (46.88%), Postives = 103/160 (64.38%), Query Frame = 0
Query:    2 PMYYQSIMQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELLYNKLKLFNHLFSFLWLTGLALLTVAILRIFKSESKAIEWSSRVLTALVFAGFMLLTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFVFYKKSNFVVPLGALFAGTLL 161
            P+Y  ++++  S  DW  ADE L Y+  YQ   G +V P    + AEL YNKL L N LF   WL G+ ++ +AI+++F S  K + +S     AL +AGF   TF+L LRWY +GHAPWS+G+EM+I V WG+L F  +F  +S+F VPLG LF+GTLL
Sbjct:  676 PLYMSALLKGTSSGDWQEADEILNYINLYQQKAGVNVYPSQNQLKAELFYNKLNLGNRLFGMFWLLGIFMMGLAIVKLF-STPKWLNYSWSTGLALAWAGFSAFTFHLALRWYIAGHAPWSDGFEMLIFVAWGVLLFGLLFGNRSHFTVPLGVLFSGTLL 834          
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Match: UPI0016462609 (cytochrome c biogenesis protein CcsA n=1 Tax=Echinicola salinicaeni TaxID=2762757 RepID=UPI0016462609)

HSP 1 Score: 152 bits (383), Expect = 1.310e-39
Identity = 78/161 (48.45%), Postives = 106/161 (65.84%), Query Frame = 0
Query:    3 MYYQSIMQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELLYNKLKLFNHLFSFLWLTGLALLTVAILRIFKSES--KAIEWSSRVLTALVFAGFMLLTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFVFYKKSNFVVPLGALFAGTLL 161
            +Y Q +   L+  DWS A+E+LGY+  +Q   GADV P+   + AELLY KL L N LF   WL G+ +L +AI ++F + S  KA+     +LT +   GF++ TF+LGLRWY + H PWS+G+EM++ VGWG+L F  VF  KS F VPLG LF+GTLL
Sbjct:  670 IYLQGLQNGLNTGDWSKAEESLGYIDLFQQKAGADVYPDEKRVNAELLYTKLNLGNRLFGVFWLLGIIMLVLAIWQMFSTTSLNKALWKIGLLLTGI---GFLVFTFHLGLRWYIAQHPPWSDGFEMLVFVGWGVLLFGLVFSGKSKFTVPLGLLFSGTLL 827          
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Match: UPI001BFCCA39 (cytochrome c biogenesis protein CcsA n=1 Tax=Echinicola shivajiensis TaxID=1035916 RepID=UPI001BFCCA39)

HSP 1 Score: 151 bits (381), Expect = 2.440e-39
Identity = 78/160 (48.75%), Postives = 103/160 (64.38%), Query Frame = 0
Query:    3 MYYQSIMQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELLYNKLKLFNHLFSFLWLTGLALLTVAILRIFKSES-KAIEWSSRVLTALVFAGFMLLTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFVFYKKSNFVVPLGALFAGTLL 161
            +Y Q +   L+  DWS A+E+LGY+  +Q   GADV P+   + AELLY +L L N LF   WL GL +L +AI ++F+  S     W   +L  L   GF + TF+LGLRWY + H PWS+G+EM++ VGWG+LFF  VF  KS F VPLG LF+GTLL
Sbjct:  670 IYLQGLKDGLNTGDWSKAEESLGYIDLFQQKAGADVYPDEKRVNAELLYTELNLGNRLFGLFWLLGLVMLLLAIWQMFRINSLNTTLWKIGLL--LTGLGFFVFTFHLGLRWYIAQHPPWSDGFEMLVFVGWGVLFFGLVFSGKSKFTVPLGLLFSGTLL 827          
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Match: A0A4Q0M6K5_9SPHI (Cytochrome C biogenesis protein n=2 Tax=Arcticibacter tournemirensis TaxID=699437 RepID=A0A4Q0M6K5_9SPHI)

HSP 1 Score: 151 bits (381), Expect = 2.440e-39
Identity = 76/159 (47.80%), Postives = 100/159 (62.89%), Query Frame = 0
Query:    3 MYYQSIMQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELLYNKLKLFNHLFSFLWLTGLALLTVAILRIFKSESKAIEWSSRVLTALVFAGFMLLTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFVFYKKSNFVVPLGALFAGTLL 161
            +Y   + + + E  W+ ADE L Y+  +Q   G  V PE  +I AELLYNKL L N LF   WLTG+ +L + IL +FK ESK I W      AL + G ++ TF+LGLRWY + H PWS+G+EM++ V WG+L F  +F  KS F VPL  LF+GTLL
Sbjct:  675 LYLSGLQKGMQEGSWTQADEALSYMHLFQQKAGKKVYPEERLIKAELLYNKLSLGNKLFGPFWLTGILMLALVILMLFK-ESKLITWGWIAGKALSWLGLLIFTFHLGLRWYIAKHPPWSDGFEMLVFVAWGVLLFGLIFSAKSKFTVPLALLFSGTLL 832          
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Match: UPI001CD2B53B (cytochrome c biogenesis protein CcsA n=1 Tax=Cesiribacter sp. SM1 TaxID=2861196 RepID=UPI001CD2B53B)

HSP 1 Score: 150 bits (380), Expect = 3.320e-39
Identity = 73/160 (45.62%), Postives = 104/160 (65.00%), Query Frame = 0
Query:    2 PMYYQSIMQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELLYNKLKLFNHLFSFLWLTGLALLTVAILRIFKSESKAIEWSSRVLTALVFAGFMLLTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFVFYKKSNFVVPLGALFAGTLL 161
            P+Y  ++++  S  +W  ADE L Y+  YQ   G +V P    + AEL YN++ L N LF   WL G+ +L +AI+++F S  K +++S      L +AGFM  TF+L LRWY +GHAPWS+G+EM+I V WG+L F  +F  +S+F VPLG LF+GTLL
Sbjct:  675 PLYMSALLKGTSTGNWQEADEILNYINLYQQKAGINVYPSQNQLKAELFYNQMNLGNRLFGMFWLLGIGMLGLAIVKLF-STPKWLDYSWSTGLVLAWAGFMAFTFHLALRWYIAGHAPWSDGFEMLIFVAWGVLLFGLLFGNRSHFTVPLGVLFSGTLL 833          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1W2G6N9_9BACT4.740e-8078.88Cytochrome c-type biogenesis protein CcsB n=2 Tax=... [more]
A0A1M6LQ94_9BACT4.910e-6163.35Cytochrome c-type biogenesis protein CcsB n=4 Tax=... [more]
UPI000D6E2CCE6.430e-4450.61cytochrome c biogenesis protein CcsA n=1 Tax=Reich... [more]
A0A6N6KDN0_9BACT5.920e-4149.69Cytochrome C biogenesis protein n=1 Tax=Bacteroide... [more]
UPI00040F1F9D7.050e-4045.00cytochrome c biogenesis protein CcsA n=1 Tax=Algor... [more]
A0A0D3L8Q9_9BACT7.060e-4046.88ABC transporter involved in cytochrome c biogenesi... [more]
UPI00164626091.310e-3948.45cytochrome c biogenesis protein CcsA n=1 Tax=Echin... [more]
UPI001BFCCA392.440e-3948.75cytochrome c biogenesis protein CcsA n=1 Tax=Echin... [more]
A0A4Q0M6K5_9SPHI2.440e-3947.80Cytochrome C biogenesis protein n=2 Tax=Arcticibac... [more]
UPI001CD2B53B3.320e-3945.63cytochrome c biogenesis protein CcsA n=1 Tax=Cesir... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR30071:SF1CYTOCHROME B/B6 PROTEIN-RELATEDcoord: 61..159
NoneNo IPR availablePANTHERPTHR30071HEME EXPORTER PROTEIN Ccoord: 61..159
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 144..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 127..143
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 116..126
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..59
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 81..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..80
NoneNo IPR availableTMHMMTMhelixcoord: 125..142
NoneNo IPR availableTMHMMTMhelixcoord: 61..80
NoneNo IPR availableTMHMMTMhelixcoord: 93..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124471contigM-pyrifera_M_contig124471:35..517 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124471.4979.1mRNA_M-pyrifera_M_contig124471.4979.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124471 8..517 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124471.4979.1 ID=prot_M-pyrifera_M_contig124471.4979.1|Name=mRNA_M-pyrifera_M_contig124471.4979.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=161bp
MPMYYQSIMQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELL
YNKLKLFNHLFSFLWLTGLALLTVAILRIFKSESKAIEWSSRVLTALVFA
GFMLLTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFVFYKKSNFVV
PLGALFAGTLL
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