prot_M-pyrifera_M_contig124442.4968.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124442.4968.1
Unique Nameprot_M-pyrifera_M_contig124442.4968.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length172
Homology
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BLAST of mRNA_M-pyrifera_M_contig124442.4968.1 vs. uniprot
Match: A0A517PLS2_9PLAN (Putative lyase n=8 Tax=Gimesia TaxID=1649453 RepID=A0A517PLS2_9PLAN)

HSP 1 Score: 115 bits (288), Expect = 1.050e-26
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 
Query:   19 MRQLLTAGLTLAICLLATPLLLSASMDVNKLVQELKSNNEDAQALAAHQLGELGPSAKAAVPA 81
            MRQLLTAGLTLAICLLATPLLLSASMDVNKLVQELKSNNEDAQALAAHQLGELGPSAKAAVPA
Sbjct:    1 MRQLLTAGLTLAICLLATPLLLSASMDVNKLVQELKSNNEDAQALAAHQLGELGPSAKAAVPA 63
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BLAST of mRNA_M-pyrifera_M_contig124442.4968.1 vs. uniprot
Match: A0A518A4I6_9PLAN (Putative lyase n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A4I6_9PLAN)

HSP 1 Score: 97.4 bits (241), Expect = 2.200e-20
Identity = 52/62 (83.87%), Postives = 57/62 (91.94%), Query Frame = 0 
Query:   19 MRQLLTAGLTLAICLLATPLLLSASMDVNKLVQELKSNNEDAQALAAHQLGELGPSAKAAVP 80
            MRQLLTAGLTLAICLL+TP L +AS DV+ LV+ELKS NEDAQALAAHQLGELGPSAK+AVP
Sbjct:    1 MRQLLTAGLTLAICLLSTPFLFAASTDVDSLVRELKSENEDAQALAAHQLGELGPSAKSAVP 62
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BLAST of mRNA_M-pyrifera_M_contig124442.4968.1 vs. uniprot
Match: A0A517RDS1_9PLAN (Putative phycocyanin operon protein Z n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RDS1_9PLAN)

HSP 1 Score: 75.9 bits (185), Expect = 6.940e-13
Identity = 40/63 (63.49%), Postives = 50/63 (79.37%), Query Frame = 0 
Query:   19 MRQLLTAGLTLAICLLATPLLLSASMDVNKLVQELKSNNEDAQALAAHQLGELGPSAKAAVPA 81
            MRQL+TAGL L++CL AT  L + S D++ L+ +LK  NED QALAAHQLGELG +AK+AVPA
Sbjct:    1 MRQLITAGLFLSLCLFATENLFAQSPDIDSLILQLKGENEDQQALAAHQLGELGSNAKSAVPA 63
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BLAST of mRNA_M-pyrifera_M_contig124442.4968.1 vs. uniprot
Match: A0A518IAH6_9PLAN (Putative lyase n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IAH6_9PLAN)

HSP 1 Score: 64.7 bits (156), Expect = 5.110e-9
Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 0 
Query:   19 MRQLLTAGLTLAICLLATPLLLSASMDVNKLVQELKSNNEDAQALAAHQLGELGPSAKAAVPA 81
            MRQLLTAGL L I LL    + + + D+N L+ EL S NE  QALAAHQLG LGP +K A+PA
Sbjct:    1 MRQLLTAGLLLGIYLLTPDFVSAQTPDINSLIIELDSENEVKQALAAHQLGTLGPVSKPAIPA 63
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124442.4968.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A517PLS2_9PLAN1.050e-26100.00Putative lyase n=8 Tax=Gimesia TaxID=1649453 RepID... [more]
A0A518A4I6_9PLAN2.200e-2083.87Putative lyase n=3 Tax=Gimesia panareensis TaxID=2... [more]
A0A517RDS1_9PLAN6.940e-1363.49Putative phycocyanin operon protein Z n=1 Tax=Gime... [more]
A0A518IAH6_9PLAN5.110e-958.73Putative lyase n=1 Tax=Gimesia fumaroli TaxID=2527... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 35..172
e-value: 1.1E-21
score: 79.0
NoneNo IPR availablePFAMPF13646HEAT_2coord: 47..120
e-value: 1.4E-10
score: 41.4
NoneNo IPR availablePANTHERPTHR12697PBS LYASE HEAT-LIKE PROTEINcoord: 42..167
NoneNo IPR availablePANTHERPTHR12697:SF5DEOXYHYPUSINE HYDROXYLASEcoord: 42..167
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..41
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 22..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..172
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 34..41
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 37..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124442contigM-pyrifera_M_contig124442:2..517 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124442.4968.1mRNA_M-pyrifera_M_contig124442.4968.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124442 2..517 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124442.4968.1 ID=prot_M-pyrifera_M_contig124442.4968.1|Name=mRNA_M-pyrifera_M_contig124442.4968.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp
FLSTDHWYSQRSAPGTMLMRQLLTAGLTLAICLLATPLLLSASMDVNKLV
QELKSNNEDAQALAAHQLGELGPSAKAAVPALISVVKEGSVAARSEAITA
LGKIGPDASAAVPELAKVLRGYSVILKYNALQALRQIGPGAKPALKQIMP
LLESNNSYLKISAAWAAAKIDP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold