mRNA_M-pyrifera_M_contig124438.4966.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124438.4966.1 vs. uniprot
Match: A0A2D6HFN9_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HFN9_9BACT) HSP 1 Score: 165 bits (418), Expect = 5.030e-46 Identity = 90/166 (54.22%), Postives = 108/166 (65.06%), Query Frame = 1
Query: 1 LSTVPFKNRIDWCMPVKARLAATAFRFGLIVLLWQLGVQGAAPFVLATAVGSSSANFMIHFAARRELAGLPHRDAPPVPWRPFLLAAAPLGLAGLSQQAYFYIDNLFVRPLAGEELLGHYNAGVRLMSFSIMIAQYASLAALPWFARRWADGELGPALAKLGQPLF 498
LS F+NRI W +PV R AA+ L++ + GV+ A F+LA A GS+SAN +H AARR L P PWR L AA PLG+AGL QQAYFY+DNLFVR +AG LG YN GVR+MS+ I +A YASLAALPW R A G LGPA+A+L QPL
Sbjct: 138 LSATVFRNRIAWGVPVAVRAAASTLGLTLVLCARRSGVEEPALFLLAIATGSASANVALHLAARRYL---PRGSQEAAPWRALLAAALPLGIAGLCQQAYFYVDNLFVRAIAGPVELGRYNVGVRVMSYGIAVAVYASLAALPWLTREHAAGRLGPAVARLLQPLL 300
BLAST of mRNA_M-pyrifera_M_contig124438.4966.1 vs. uniprot
Match: A0A2E5X706_9BACT (Polysacc_synt_C domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X706_9BACT) HSP 1 Score: 161 bits (408), Expect = 1.330e-44 Identity = 86/166 (51.81%), Postives = 107/166 (64.46%), Query Frame = 1
Query: 1 LSTVPFKNRIDWCMPVKARLAATAFRFGLIVLLWQLGVQGAAPFVLATAVGSSSANFMIHFAARRELAGLPHRDAPPVPWRPFLLAAAPLGLAGLSQQAYFYIDNLFVRPLAGEELLGHYNAGVRLMSFSIMIAQYASLAALPWFARRWADGELGPALAKLGQPLF 498
LS FKN+I W PV R AA ++L + GV+ A F+LA A+GS+ N +H +R LA LP R + P PWRP + AA PLG+A L QQ YFYIDN+FVR L GE +GHYN VRLMS++IM+A +A+LAALPW R G LG A A+L QPLF
Sbjct: 144 LSLTVFKNKIAWARPVAVRAAANGASLAFVLLCYWRGVEEPALFLLAVALGSTLGNLGLHAISRPLLARLP-RPSTPEPWRPLVRAALPLGIASLCQQTYFYIDNIFVRALVGEAAVGHYNIAVRLMSWAIMVAVFATLAALPWLTREHEAGRLGRATARLAQPLF 308
BLAST of mRNA_M-pyrifera_M_contig124438.4966.1 vs. uniprot
Match: A0A523PQE4_9BACT (Polysacc_synt_C domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PQE4_9BACT) HSP 1 Score: 160 bits (406), Expect = 1.150e-43 Identity = 85/166 (51.20%), Postives = 103/166 (62.05%), Query Frame = 1
Query: 1 LSTVPFKNRIDWCMPVKARLAATAFRFGLIVLLWQLGVQGAAPFVLATAVGSSSANFMIHFAARRELAGLPHRDAPPVPWRPFLLAAAPLGLAGLSQQAYFYIDNLFVRPLAGEELLGHYNAGVRLMSFSIMIAQYASLAALPWFARRWADGELGPALAKLGQPLF 498
LST+ FKNRI W PV R A+ +V GV+ F++A A+GS+ N ++H A+R L P R P P RPFL A P+GLAGL QQ YFYIDNLFVR + G +GHYN VR+MSF IM+A +A LAALPW R A G LG A A+L QPLF
Sbjct: 233 LSTIVFKNRIAWAKPVVVRAVASGASLAFVVAFLAAGVRAPELFLVAIAMGSAIGNLLLHLASRSHL---PRRVGPVAPLRPFLRNALPIGLAGLCQQTYFYIDNLFVRGIEGATAVGHYNVAVRIMSFGIMVAVFAPLAALPWLTREHAAGRLGVAAARLAQPLF 395
BLAST of mRNA_M-pyrifera_M_contig124438.4966.1 vs. uniprot
Match: A0A7C8D133_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C8D133_9BACT) HSP 1 Score: 156 bits (395), Expect = 2.100e-42 Identity = 80/166 (48.19%), Postives = 106/166 (63.86%), Query Frame = 1
Query: 1 LSTVPFKNRIDWCMPVKARLAATAFRFGLIVLLWQLGVQGAAPFVLATAVGSSSANFMIHFAARRELAGLPHRDAPPVPWRPFLLAAAPLGLAGLSQQAYFYIDNLFVRPLAGEELLGHYNAGVRLMSFSIMIAQYASLAALPWFARRWADGELGPALAKLGQPLF 498
LS +KN + W PV R A+ ++ L GV A +++ A+GS+SANF +HFAARR LA + P + WR L AA PLGLAGL QQ YFY+DNLFVR G+ +GHYN VRLMS +IM+ +A++ ALPW+ R +A GELGPA+ + QP+F
Sbjct: 176 LSATVYKNNMAWATPVAIRALASGIGLLCVLALLSQGVDEGALYLVGIALGSASANFALHFAARRHLARV---RVPRILWRSVLRAALPLGLAGLCQQTYFYVDNLFVRAFEGQVAVGHYNIAVRLMSLAIMVGVFAAMVALPWYRREYARGELGPAVRRQAQPMF 338
BLAST of mRNA_M-pyrifera_M_contig124438.4966.1 vs. uniprot
Match: A0A2D5W5I1_9BACT (Polysacc_synt_C domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W5I1_9BACT) HSP 1 Score: 152 bits (384), Expect = 6.500e-41 Identity = 84/166 (50.60%), Postives = 103/166 (62.05%), Query Frame = 1
Query: 1 LSTVPFKNRIDWCMPVKARLAATAFRFGLIVLLWQLGVQGAAPFVLATAVGSSSANFMIHFAARRELAGLPHRDAPPVPWRPFLLAAAPLGLAGLSQQAYFYIDNLFVRPLAGEELLGHYNAGVRLMSFSIMIAQYASLAALPWFARRWADGELGPALAKLGQPLF 498
LS FKN I W PV R AA ++L + GV+ A F+ A A+GS+ N +H +R LA LP R + P+ P L AA PLG+A L QQ YFYIDNLFVR L GE +GHYN VRLMS++IM+A +A+LAALPW R G LG A A+L QPLF
Sbjct: 163 LSLTVFKNEIAWGRPVAVRAAANGASLAFVLLCYWRGVEEPALFLFAVALGSTLGNLGLHAISRPHLARLP-RSSAAQPYGPILRAALPLGIASLCQQTYFYIDNLFVRALVGEAAVGHYNIAVRLMSWAIMVAVFATLAALPWLTREHRAGRLGVATARLAQPLF 327
BLAST of mRNA_M-pyrifera_M_contig124438.4966.1 vs. uniprot
Match: A0A800G0P9_9BACT (Polysacc_synt_C domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800G0P9_9BACT) HSP 1 Score: 150 bits (379), Expect = 2.460e-40 Identity = 82/167 (49.10%), Postives = 102/167 (61.08%), Query Frame = 1
Query: 1 LSTVPFKNRIDWCMPVKARLAATAFRFGLIVLLWQLGVQGAAPFVLATAVGSSSANFMIHFAARRELAGLPHRDAPPVPWRPFLLAAAPLGLAGLSQQAYFYIDNLFVRPLAGEELLGHYNAGVRLMSFSIMIAQYASLAALPWFARRWADGELGPALAKLGQPLFL 501
L+T KNRI W V R A A L++ GV APF+LA A GS+ N ++H +R L + R AP R F A P+GLAGL QQ YF+IDN+FVRP+ G+E LG YN VRLMSF IM A YA++AALPW R +G LGPA+A+L P+FL
Sbjct: 137 LTTTVLKNRISWARVVMVRSIAAAISLTLVLCAVANGVSTPAPFLLAVAGGSTLGNLLLHLVSRSHLPPITPRSAPESARRLFR-EALPIGLAGLCQQTYFWIDNVFVRPICGQEELGRYNLAVRLMSFGIMAAVYAAMAALPWLTREHREGRLGPAVARLAAPMFL 302
BLAST of mRNA_M-pyrifera_M_contig124438.4966.1 vs. uniprot
Match: A0A2E6D467_9BACT (Polysacc_synt_C domain-containing protein n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A2E6D467_9BACT) HSP 1 Score: 143 bits (361), Expect = 1.040e-37 Identity = 79/167 (47.31%), Postives = 100/167 (59.88%), Query Frame = 1
Query: 1 LSTVPFKNRIDWCMPVKARLAATAFRFGLIVLLWQLGVQGAAPFVLATAVGSSSANFMIHFAARRELAGLPHRDAPPVPWRPFLLAAAPLGLAGLSQQAYFYIDNLFVRPLAGEELLGHYNAGVRLMSFSIMIAQYASLAALPWFARRWADGELGPALAKLGQPLFL 501
L+T KN I W V R A+A L++ GV APF+LA A GS+ N ++H +R L P + P R L A P+GLAGL QQ YF+IDN+FVRP+ G+E LG YN VRLMSF IM A YA++A+LPW R G LGPA+A+L P+FL
Sbjct: 137 LTTTVLKNHISWARVVIVRSIASATSLALVLWALTSGVSTPAPFLLAIACGSTLGNLLLHLVSRGHLPP-PAPQSEPESARLLLREALPIGLAGLCQQTYFWIDNVFVRPICGQEELGRYNLAVRLMSFGIMAAVYAAMASLPWLTREHRAGRLGPAVARLAAPMFL 302
BLAST of mRNA_M-pyrifera_M_contig124438.4966.1 vs. uniprot
Match: A0A518BIQ2_9BACT (Polysaccharide biosynthesis protein n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BIQ2_9BACT) HSP 1 Score: 140 bits (352), Expect = 2.450e-36 Identity = 81/165 (49.09%), Postives = 100/165 (60.61%), Query Frame = 1
Query: 1 LSTVPFKNRIDWCMPVKARLAATAFRFGLIVLLWQLGVQGAAPFVLATAVGSSSANFMIHFAARRELAGLPHRDAPPVPWRPFLLAAAPLGLAGLSQQAYFYIDNLFVRPLAGEELLGHYNAGVRLMSFSIMIAQYASLAALPWFARRWADGELGPALAKLGQPL 495
LS FKNR+ W +PV R AA FR + L V+ ++ ATA GS+ AN ++H AA L P P R A PLG+A ++QQAYFY+DN+FVR + G LG YNA VR+MSF IM+AQYASL LPW RR A G+LG A A+LGQPL
Sbjct: 154 LSATVFKNRLAWGIPVAIRAAAATFRLVAVFALLAFDVETPGAYLAATAAGSALANLLLHRAAWPLL---PKPTIAIQPARGVFAEAWPLGIALIAQQAYFYVDNVFVRAIDGTVELGRYNAAVRVMSFLIMVAQYASLTGLPWLTRRRAAGDLGVAAARLGQPL 315
BLAST of mRNA_M-pyrifera_M_contig124438.4966.1 vs. uniprot
Match: A0A7Y5Q1Q2_9PLAN (Polysaccharide biosynthesis C-terminal domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Y5Q1Q2_9PLAN) HSP 1 Score: 123 bits (309), Expect = 1.060e-31 Identity = 65/118 (55.08%), Postives = 78/118 (66.10%), Query Frame = 1
Query: 145 AVGSSSANFMIHFAARRELAGLPHRDAPPVPWRPFLLAAAPLGLAGLSQQAYFYIDNLFVRPLAGEELLGHYNAGVRLMSFSIMIAQYASLAALPWFARRWADGELGPALAKLGQPLF 498
A+GS+ N ++H A+RR L P R P R F + PLGL+ L Q YFY+DNLFV L G+E LGHYN VR+MS+SIM+AQY SL LPWF RR GELG AL K+G PLF
Sbjct: 1 ALGSTLGNALLHLASRRHL---PPRRTHDEPERGFFRESLPLGLSALCAQTYFYVDNLFVSELCGDEPLGHYNVAVRVMSWSIMLAQYTSLTVLPWFRRRHVAGELGSALGKVGPPLF 115
BLAST of mRNA_M-pyrifera_M_contig124438.4966.1 vs. uniprot
Match: A0A2D5AXF8_9BACT (Polysacc_synt_C domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5AXF8_9BACT) HSP 1 Score: 100 bits (250), Expect = 5.970e-22 Identity = 67/165 (40.61%), Postives = 87/165 (52.73%), Query Frame = 1
Query: 4 STVPFKNRIDWCMPVKARLAATAFRFGLIVLLWQLGVQGAAPFVLATAVGSSSANFMIHFAARRELAGLPHR----DAPPVPWRPFLLAAAPLGLAGLSQQAYFYIDNLFVRPLAGEELLGHYNAGVRLMSFSIMIAQYASLAALPWFARRWADGELGPALAKLG 486
S + F+ I +PV R + R I L GV +L A ++AN ++H ARR L + D P + L A PL LAG+ QQAYFY+DNLFVR L G E LG YNA R+ S+ +++A YA+ AALPW RR G L A A+LG
Sbjct: 141 SALCFQRSIAHGVPVLVRSLSATLRLVSICGLALGGVHSVPLLLLVHASWIAAANLVLHRLARRHLPRIGDSTIPLDTPRLATLTLLRTAFPLALAGMFQQAYFYVDNLFVRSLLGLEELGLYNAAARIFSWLVLVAAYATSAALPWLVRRHEAGGLRAATARLG 305 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124438.4966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124438.4966.1 >prot_M-pyrifera_M_contig124438.4966.1 ID=prot_M-pyrifera_M_contig124438.4966.1|Name=mRNA_M-pyrifera_M_contig124438.4966.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=171bp LSTVPFKNRIDWCMPVKARLAATAFRFGLIVLLWQLGVQGAAPFVLATAVback to top mRNA from alignment at M-pyrifera_M_contig124438:7..519- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124438.4966.1 ID=mRNA_M-pyrifera_M_contig124438.4966.1|Name=mRNA_M-pyrifera_M_contig124438.4966.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=513bp|location=Sequence derived from alignment at M-pyrifera_M_contig124438:7..519- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124438:7..519- >mRNA_M-pyrifera_M_contig124438.4966.1 ID=mRNA_M-pyrifera_M_contig124438.4966.1|Name=mRNA_M-pyrifera_M_contig124438.4966.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1026bp|location=Sequence derived from alignment at M-pyrifera_M_contig124438:7..519- (Macrocystis pyrifera P11B4 male)back to top |