mRNA_M-pyrifera_M_contig124269.4944.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Match: A0A4P5YL91_9BACT (Sugar ABC transporter permease n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A4P5YL91_9BACT) HSP 1 Score: 204 bits (520), Expect = 1.710e-62 Identity = 97/173 (56.07%), Postives = 134/173 (77.46%), Query Frame = 1
Query: 1 KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVIISGGIDLSIGSVVGLSGCVLAWLLTDNEMSVPAAMLAITAMSLAIGLAHGLLITKVGLQPFVVTLCGLLLYRGLARYLTDDGSVGFGTGFTGLKSVANGKIAIPFVESFAIPTPFILLIGLAL 519
+ LGI GLL+ +CL+TA F S N++NT+RW++LFGI+SIGV++VII+GGIDLSIGS +GL+GC+LAW LT V A++ + S+ IGL HGLLITK+ LQPFVVTLCGLL+YRG AR++T+D SVGFG+ F GL +A+GKI +PF ++F +P PF+ ++ +A+
Sbjct: 3 RILGITGLLVFVCLFTALKKPEFLSAYNLQNTIRWSSLFGIVSIGVAFVIITGGIDLSIGSTIGLTGCLLAWALTQKHWGVGASLALVLGCSVLIGLTHGLLITKMKLQPFVVTLCGLLIYRGTARFITNDQSVGFGSDFKGLSKLADGKIPLPFTDAFTLPAPFVTMLIVAI 175
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Match: A0A6I1JWV1_9BACT (Ribose transport system permease protein n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A6I1JWV1_9BACT) HSP 1 Score: 202 bits (513), Expect = 1.990e-61 Identity = 101/172 (58.72%), Postives = 135/172 (78.49%), Query Frame = 1
Query: 1 KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVIISGGIDLSIGSVVGLSGCVLAWLLTDNEMSVPAAMLAITAMSLAIGLAHGLLITKVGLQPFVVTLCGLLLYRGLARYLTDDGSVGFGTGFTGLKSVANGKIAIPFVESFAIPTPFILLIGLA 516
K LGI GLL+ +CL+ A+ S +F SG N+EN +R TALFG+I IGV++VI++GGIDLSIGSV+ L GC L WLLT + S+PAA+LA+ +S+ IGL HGLLITK+ LQPF+VTLCGL+LYRG+ R T D +VGFG G+ L+ +A GKI+IPFV+ F IP P+++L+ +A
Sbjct: 3 KLLGIFGLLLAVCLFAAWASESFRSGYNVENLIRRTALFGVIGIGVTFVIVTGGIDLSIGSVICLVGCGLPWLLTVQKWSLPAALLAVAVVSMGIGLMHGLLITKLRLQPFIVTLCGLMLYRGITRGFTKDQTVGFGDGYKDLRVLATGKISIPFVQGFEIPAPWVVLVIVA 174
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Match: A0A7Z9HTZ4_9BACT (ABC transporter permease n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Z9HTZ4_9BACT) HSP 1 Score: 198 bits (504), Expect = 3.620e-60 Identity = 105/172 (61.05%), Postives = 134/172 (77.91%), Query Frame = 1
Query: 1 KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVIISGGIDLSIGSVVGLSGCVLAWLLTDNEMSVPAAMLAITAMSLAIGLAHGLLITKVGLQPFVVTLCGLLLYRGLARYLTDDGSVGFGTGFTGLKSVANGKIAIPFVESFAIPTPFILLIGLA 516
K LGI+ LLI IC +TA + NF + N++NTLRWTAL+G+ISIGV++VIISGGIDLSIGSVVGL+G +L LLT +++SV A+LA+ +SLAIGL HGLLITKVGLQPFVVTLCGLL YRG AR+LT+D S+G+ F GL+ +A G I P E F IP P ++++ +A
Sbjct: 3 KILGISLLLIAICTFTAIMNPNFLNAYNVQNTLRWTALYGVISIGVAFVIISGGIDLSIGSVVGLTGSLLVLLLTKHDVSVSLALLAVLVLSLAIGLLHGLLITKVGLQPFVVTLCGLLFYRGAARFLTNDQSLGYAQDFDGLRQLAIGSI--PITEEFGIPYPLVVMLTIA 172
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Match: A0A518A9E0_9PLAN (Ribose transport system permease protein RbsC n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A9E0_9PLAN) HSP 1 Score: 198 bits (504), Expect = 4.280e-60 Identity = 99/173 (57.23%), Postives = 139/173 (80.35%), Query Frame = 1
Query: 1 KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVIISGGIDLSIGSVVGLSGCVLAWLLTDNEMSVPAAMLAITAMSLAIGLAHGLLITKVGLQPFVVTLCGLLLYRGLARYLTDDGSVGFGTGFTGLKSVANGKIAIPFVESFAIPTPFILLIGLAL 519
K LGI LLIV+CL TA ++ +F S N++N +R T+LFGIISIGV++VIISGGIDLSIGSV+ L G +L +LL ++ VP A++++ +++ IGLAHGLLITK+ LQPF+VTLCGLL+YRG+AR +T+D + GFG G+TGL+ +A GKI++PF+E F +P PF+++I LA+
Sbjct: 3 KILGILILLIVVCLITAVSNKSFISAYNLQNVIRLTSLFGIISIGVAFVIISGGIDLSIGSVICLVGSLLPYLLVEHGFPVPVALISVMTLAVLIGLAHGLLITKLKLQPFIVTLCGLLIYRGIARGITEDQTQGFGNGYTGLRYLATGKISLPFIEGFKLPVPFLIMIFLAI 175
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Match: A0A517VUU7_9PLAN (Ribose transport system permease protein RbsC n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VUU7_9PLAN) HSP 1 Score: 198 bits (503), Expect = 6.220e-60 Identity = 100/173 (57.80%), Postives = 138/173 (79.77%), Query Frame = 1
Query: 1 KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVIISGGIDLSIGSVVGLSGCVLAWLLTDNEMSVPAAMLAITAMSLAIGLAHGLLITKVGLQPFVVTLCGLLLYRGLARYLTDDGSVGFGTGFTGLKSVANGKIAIPFVESFAIPTPFILLIGLAL 519
K LGI LLIV+C+ TA ++ NF+S N++N +R T+LFGIISIGV++VIISGGIDLSIGSV+ L G +L ++L + S+ +A+L ++ +S+AIGL HGLLITK+ LQPFVVTLCGLL+YRG+AR +T D + GFGT + GL+ +A GKI +PF+E F +P PF++++GLAL
Sbjct: 3 KVLGILILLIVVCIITAISNENFFSAYNMQNVIRLTSLFGIISIGVAFVIISGGIDLSIGSVICLVGSLLPFVLVEKGFSITSALLLVSTVSIAIGLFHGLLITKLKLQPFVVTLCGLLIYRGIARGITQDETQGFGTAYAGLRYLAIGKIDLPFIEGFKLPVPFLIMLGLAL 175
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Match: A0A518IFL3_9PLAN (Ribose transport system permease protein RbsC n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IFL3_9PLAN) HSP 1 Score: 196 bits (497), Expect = 4.980e-59 Identity = 98/173 (56.65%), Postives = 137/173 (79.19%), Query Frame = 1
Query: 1 KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVIISGGIDLSIGSVVGLSGCVLAWLLTDNEMSVPAAMLAITAMSLAIGLAHGLLITKVGLQPFVVTLCGLLLYRGLARYLTDDGSVGFGTGFTGLKSVANGKIAIPFVESFAIPTPFILLIGLAL 519
K LGI LLIV+C+ TA ++ NF S N++N +R T+LFGIISIGV++VIISGGIDLSIGSV+ L G +L +++ + + S+ +A+L +S+AIGL HGLLITK+ LQPF+VTLCGLL+YRG+AR +T+D + GFGTG+T L+ +A GK+ IPF E F +P PF++++GLA+
Sbjct: 3 KILGILILLIVVCVVTAVSNENFVSAYNMQNVIRLTSLFGIISIGVAFVIISGGIDLSIGSVICLVGSLLPYMIVEKQFSIASALLLAGTISIAIGLFHGLLITKLKLQPFIVTLCGLLIYRGIARGITEDQTQGFGTGYTSLRYLATGKVEIPFWEGFKLPVPFLIMLGLAI 175
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Match: A0A6N6Q4Q6_9BACT (ABC transporter permease n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A6N6Q4Q6_9BACT) HSP 1 Score: 194 bits (494), Expect = 1.530e-58 Identity = 99/173 (57.23%), Postives = 133/173 (76.88%), Query Frame = 1
Query: 1 KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVIISGGIDLSIGSVVGLSGCVLAWLLTDNEMSVPAAMLAITAMSLAIGLAHGLLITKVGLQPFVVTLCGLLLYRGLARYLTDDGSVGFGTGFTGLKSVANGKIAIPFVESFAIPTPFILLIGLAL 519
K GI GL + + ++TA + F S N+EN +RW +LFGIISIGVS+VII+GGIDLSIGS++GL+G ++AWLLT SVPA ++ + +SL++GLAHGLLIT++ LQPFVVTLCGLLLYRG+AR++TDD S GFG GL+++A GKI P SF+IP PF +L+ +A+
Sbjct: 3 KIFGILGLFLAVFVFTALRNPQFVSAYNLENLIRWISLFGIISIGVSFVIITGGIDLSIGSLIGLTGSLMAWLLTHRGWSVPATLVTVLLLSLSVGLAHGLLITRLRLQPFVVTLCGLLLYRGIARFITDDQSQGFGNSHEGLRAIAIGKI--PVGSSFSIPVPFFILLLIAI 173
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Match: A0A4P5QT83_9BACT (Sugar ABC transporter permease n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A4P5QT83_9BACT) HSP 1 Score: 194 bits (493), Expect = 2.100e-58 Identity = 102/173 (58.96%), Postives = 130/173 (75.14%), Query Frame = 1
Query: 1 KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVIISGGIDLSIGSVVGLSGCVLAWLLTDNEMSVPAAMLAITAMSLAIGLAHGLLITKVGLQPFVVTLCGLLLYRGLARYLTDDGSVGFGTG-FTGLKSVANGKIAIPFVESFAIPTPFILLIGLA 516
K LGI GLLIV+C+ TA S F +G N+EN R TALFGIISIGV++VI +GGIDLSIGSVV L GC L WLL + +PAA+ + A+S+ IGL HGL+ITK+ + PFVVTLCGL++YRG+AR T+D VGFG G F GL+ +A G+IA+PFV F+IP P+I L+ +A
Sbjct: 3 KILGITGLLIVVCIVTALASDRFLTGYNLENLFRRTALFGIISIGVAFVIATGGIDLSIGSVVCLVGCGLPWLLVTHHWPLPAALAMVAAVSVGIGLFHGLIITKLRIPPFVVTLCGLMMYRGIARGFTNDQQVGFGNGGFPGLRKLATGEIAVPFVHGFSIPAPWITLVAVA 175
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Match: A0A517VGY9_9PLAN (Ribose transport system permease protein RbsC n=9 Tax=Planctomycetaceae TaxID=126 RepID=A0A517VGY9_9PLAN) HSP 1 Score: 190 bits (482), Expect = 8.760e-57 Identity = 102/173 (58.96%), Postives = 132/173 (76.30%), Query Frame = 1
Query: 1 KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVIISGGIDLSIGSVVGLSGCVLAWLLTDNEMSVPAAMLAITAMSLAIGLAHGLLITKVGLQPFVVTLCGLLLYRGLARYLTDDGSVGFGTGFTGLKSVANGKIAIPFVESFAIPTPFILLIGLAL 519
K LGI LLIV+C TA ++ NF S NI+N R T+LFGIISIGV++VIISGGIDLSIGSV+ L G +L +LL + VP A L + +S+ IGLAHGLLITK+ LQPF+VTLCGLL+YRG+AR +T+D + GFGT GL+ +A GKI +PF+E F +P PF++++GLAL
Sbjct: 3 KILGILILLIVVCGVTAISNENFVSAYNIQNVTRLTSLFGIISIGVAFVIISGGIDLSIGSVICLIGTMLPYLLAKG-VPVPLAFLLVGVLSICIGLAHGLLITKLKLQPFIVTLCGLLIYRGVARGITEDQTQGFGTAHAGLRYLATGKIDLPFIEGFKLPVPFLIMLGLAL 174
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Match: A0A517XEP0_9PLAN (Ribose transport system permease protein RbsC n=5 Tax=Planctomycetaceae TaxID=126 RepID=A0A517XEP0_9PLAN) HSP 1 Score: 186 bits (471), Expect = 3.740e-55 Identity = 95/173 (54.91%), Postives = 133/173 (76.88%), Query Frame = 1
Query: 1 KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVIISGGIDLSIGSVVGLSGCVLAWLLTDNEMSVPAAMLAITAMSLAIGLAHGLLITKVGLQPFVVTLCGLLLYRGLARYLTDDGSVGFGTGFTGLKSVANGKIAIPFVESFAIPTPFILLIGLAL 519
K LGI LLI +C+ TA ++ +F+S N++N +R T+LFGIISIGV++VIISGGIDLSIGSV+ L G +L +++ + + VP A+L +S+ IGL+HGLLITK+ LQPF+VTLCGLL+YRG+AR +T+D + GFG L+ +A GKI IPF+E F +P PF+++IG+AL
Sbjct: 3 KILGILILLIFVCIVTAASNEHFFSAYNMQNVIRLTSLFGIISIGVAFVIISGGIDLSIGSVICLVGSLLPYMIMEMSVPVPLALLFSAVLSIVIGLSHGLLITKLKLQPFIVTLCGLLIYRGIARGITEDQTQGFGATHDSLRYLATGKINIPFLEGFRLPVPFLIMIGVAL 175 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124269.4944.1 >prot_M-pyrifera_M_contig124269.4944.1 ID=prot_M-pyrifera_M_contig124269.4944.1|Name=mRNA_M-pyrifera_M_contig124269.4944.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=173bp KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVIback to top mRNA from alignment at M-pyrifera_M_contig124269:1..519- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124269.4944.1 ID=mRNA_M-pyrifera_M_contig124269.4944.1|Name=mRNA_M-pyrifera_M_contig124269.4944.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=519bp|location=Sequence derived from alignment at M-pyrifera_M_contig124269:1..519- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124269:1..519- >mRNA_M-pyrifera_M_contig124269.4944.1 ID=mRNA_M-pyrifera_M_contig124269.4944.1|Name=mRNA_M-pyrifera_M_contig124269.4944.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1038bp|location=Sequence derived from alignment at M-pyrifera_M_contig124269:1..519- (Macrocystis pyrifera P11B4 male)back to top |