prot_M-pyrifera_M_contig124260.4942.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124260.4942.1
Unique Nameprot_M-pyrifera_M_contig124260.4942.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length100
Homology
BLAST of mRNA_M-pyrifera_M_contig124260.4942.1 vs. uniprot
Match: UPI00037273A4 (ABC transporter permease n=1 Tax=Candidatus Microthrix parvicella TaxID=41950 RepID=UPI00037273A4)

HSP 1 Score: 125 bits (314), Expect = 1.130e-33
Identity = 68/97 (70.10%), Postives = 80/97 (82.47%), Query Frame = 0
Query:    3 AAAFAGATGAVLGAGLXXIIRSVGGAVAATTVGLVIVPPLVVQLASETGSWMPSVLANVLAGVGTDVSGTAAIAALGMWALIPAMIGLVAVQRRDVV 99
            AAAFAGA GAV GAG   I+RSVGGAV  TT+ L+I PPL+VQ+A++T SWMP++LANVLAG GTDVS  AA+AAL  WAL+PA IGL AV+RRDVV
Sbjct:  152 AAAFAGAAGAVFGAGFGSIVRSVGGAVTGTTIALIIAPPLIVQMANDTASWMPNILANVLAGAGTDVSTPAALAALAAWALVPAAIGLWAVERRDVV 248          
BLAST of mRNA_M-pyrifera_M_contig124260.4942.1 vs. uniprot
Match: A0A351ESW7_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351ESW7_9ACTN)

HSP 1 Score: 100 bits (249), Expect = 1.090e-25
Identity = 54/88 (61.36%), Postives = 67/88 (76.14%), Query Frame = 0
Query:   11 GAVLGAGLXXIIRSVGGAVAATTVGLVIVPPLVVQLASETGSWMPSVLANVLAGVGTDVSGTAAIAALGMWALIPAMIGLVAVQRRDV 98
            GAV G G+  ++R+VGGAV    + L++ PPL+VQLA+ T SWMP+ LA VLAGV TDVSG AA+AAL  WAL+   +GLVAVQRRDV
Sbjct:    3 GAVFGVGIGAVVRNVGGAVTGVVLMLIVAPPLIVQLANSTASWMPNSLALVLAGVTTDVSGPAAVAALSAWALVSTGVGLVAVQRRDV 90          
BLAST of mRNA_M-pyrifera_M_contig124260.4942.1 vs. uniprot
Match: A0A4Q2T474_9ACTN (Uncharacterized protein n=1 Tax=Nocardioides zhouii TaxID=1168729 RepID=A0A4Q2T474_9ACTN)

HSP 1 Score: 98.6 bits (244), Expect = 3.260e-23
Identity = 58/99 (58.59%), Postives = 71/99 (71.72%), Query Frame = 0
Query:    1 VAAAAFAGATGAVLGAGLXXIIRSVGGAVAATTVGLVIVPPLVVQLASETGSWMPSVLANVLAGVGTDVSGTAAIAALGMWALIPAMIGLVAVQRRDVV 99
            +AA  FAGA GAVLGAGL  IIR+VGGAV    + L ++PPL  QL +E GSW+P  L  V++GV   VS  AA+ A+  WAL+PA +GLVAVQRRDVV
Sbjct:  150 LAATTFAGAIGAVLGAGLGSIIRNVGGAVTVAVLVLFVIPPLAAQLVAEAGSWIPPTLFAVISGVDAAVSLGAALVAITAWALVPAGLGLVAVQRRDVV 248          
BLAST of mRNA_M-pyrifera_M_contig124260.4942.1 vs. uniprot
Match: UPI000B4C0712 (hypothetical protein n=1 Tax=Kineosporia sp. A_224 TaxID=1962180 RepID=UPI000B4C0712)

HSP 1 Score: 95.1 bits (235), Expect = 6.910e-22
Identity = 56/96 (58.33%), Postives = 71/96 (73.96%), Query Frame = 0
Query:    3 AAAFAGATGAVLGAGLXXIIRSVGGAVAATTVGLVIVPPLVVQLASETGSWMPSVLANVLAGVGTDVSGTAAIAALGMWALIPAMIGLVAVQRRDV 98
            A+A AGA GAVLGAGL  +IR+ GGAV A  + + + PPLVVQLA    SW+P+ L  VL+GV +DVS  AA+ A+  WAL+PA+ GLV+VQRRDV
Sbjct:  152 ASAAAGAIGAVLGAGLGTVIRNTGGAVTAAVLVVFLAPPLVVQLAGAAVSWIPTALLAVLSGVSSDVSIWAALLAVAAWALVPAVAGLVSVQRRDV 247          
BLAST of mRNA_M-pyrifera_M_contig124260.4942.1 vs. uniprot
Match: UPI001E4B3DCB (hypothetical protein n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E4B3DCB)

HSP 1 Score: 94.4 bits (233), Expect = 1.390e-21
Identity = 53/99 (53.54%), Postives = 73/99 (73.74%), Query Frame = 0
Query:    1 VAAAAFAGATGAVLGAGLXXIIRSVGGAVAATTVGLVIVPPLVVQLASETGSWMPSVLANVLAGVGTDVSGTAAIAALGMWALIPAMIGLVAVQRRDVV 99
            +AA+   GA GAVLGAG+  ++R+ GGAV    + L++ PPLVVQLAS T SWMP+ LA+VL+GV T+V   +A AA+  WA +PA + ++AV+RRDVV
Sbjct:  150 LAASTLCGAAGAVLGAGIGTLVRNTGGAVTGAVLVLLVAPPLVVQLASGTASWMPATLASVLSGVTTEVGIASAAAAICGWAAVPAALAILAVRRRDVV 248          
BLAST of mRNA_M-pyrifera_M_contig124260.4942.1 vs. uniprot
Match: A0A7X5WLK0_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WLK0_9ACTN)

HSP 1 Score: 94.4 bits (233), Expect = 1.450e-21
Identity = 53/106 (50.00%), Postives = 74/106 (69.81%), Query Frame = 0
Query:    1 VAAAAFAGATGAVLGAGLXXIIRSVGGAVAATTVGLVIVPPLVVQLASETGSWMPSVLANVLAGVGTDVSGT-------AAIAALGMWALIPAMIGLVAVQRRDVV 99
            +AA+AFAGA G VLGAG+  ++R+ GGAV  T + L++ PPL+VQL S+  SW+P+ LA  +AGV  D +         AA   L +WAL+PA+IGL++V+RRDVV
Sbjct:  145 LAASAFAGAAGGVLGAGIGAVVRNAGGAVTGTVLVLIVAPPLIVQLISDASSWVPAPLAIAMAGVDPDAANVPTQANAVAATVVLAVWALVPALIGLLSVERRDVV 250          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124260.4942.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
UPI00037273A41.130e-3370.10ABC transporter permease n=1 Tax=Candidatus Microt... [more]
A0A351ESW7_9ACTN1.090e-2561.36Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A4Q2T474_9ACTN3.260e-2358.59Uncharacterized protein n=1 Tax=Nocardioides zhoui... [more]
UPI000B4C07126.910e-2258.33hypothetical protein n=1 Tax=Kineosporia sp. A_224... [more]
UPI001E4B3DCB1.390e-2153.54hypothetical protein n=1 Tax=Rhabdothermincola sp.... [more]
A0A7X5WLK0_9ACTN1.450e-2150.00Uncharacterized protein n=1 Tax=Actinomycetia bact... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 94..99
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..72
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..93
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..22
NoneNo IPR availableTMHMMTMhelixcoord: 34..56
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 71..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124260contigM-pyrifera_M_contig124260:2..301 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124260.4942.1mRNA_M-pyrifera_M_contig124260.4942.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124260 2..301 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124260.4942.1 ID=prot_M-pyrifera_M_contig124260.4942.1|Name=mRNA_M-pyrifera_M_contig124260.4942.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=100bp
VAAAAFAGATGAVLGAGLGAIIRSVGGAVAATTVGLVIVPPLVVQLASET
GSWMPSVLANVLAGVGTDVSGTAAIAALGMWALIPAMIGLVAVQRRDVV*
back to top