prot_M-pyrifera_M_contig124240.4938.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124240.4938.1
Unique Nameprot_M-pyrifera_M_contig124240.4938.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length173
Homology
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Match: A0A517ZZ80_9PLAN (DNA helicase n=8 Tax=Gimesia TaxID=1649453 RepID=A0A517ZZ80_9PLAN)

HSP 1 Score: 322 bits (825), Expect = 1.700e-103
Identity = 165/173 (95.38%), Postives = 170/173 (98.27%), Query Frame = 0
Query:    1 DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLAYLKLINNPDDRVAFGRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCSTLSKRAATMVARFAKMISGFSLADTGSVAQLMEVVIDSTRMIDSWKESPDEDDQQRIANVNELVS 173
            DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLL+YLKLINNPDDRVAF RIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADC  LSKRAATMVARFAKMISGFSLAD+GSVAQLME+VIDSTR+IDSWKESPDE+DQQRIANVNELVS
Sbjct:  341 DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLSYLKLINNPDDRVAFSRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCPALSKRAATMVARFAKMISGFSLADSGSVAQLMELVIDSTRLIDSWKESPDEEDQQRIANVNELVS 513          
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Match: A0A517V640_9PLAN (DNA helicase n=8 Tax=Planctomycetaceae TaxID=126 RepID=A0A517V640_9PLAN)

HSP 1 Score: 302 bits (773), Expect = 8.960e-96
Identity = 150/173 (86.71%), Postives = 165/173 (95.38%), Query Frame = 0
Query:    1 DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLAYLKLINNPDDRVAFGRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCSTLSKRAATMVARFAKMISGFSLADTGSVAQLMEVVIDSTRMIDSWKESPDEDDQQRIANVNELVS 173
            D+G+  YTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLL+YLKL+NNPDDR+AF RIVNKPLRGIGKTTQ KLIRWADE+GISLLEAAHQAADC  LSKRAATM+ARFAKMI+GFS+AD+G+VA LME +IDSTR++DSWKESPDEDDQQRIANVNEL+S
Sbjct:  341 DQGDHAYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLSYLKLVNNPDDRIAFSRIVNKPLRGIGKTTQNKLIRWADERGISLLEAAHQAADCPKLSKRAATMLARFAKMINGFSMADSGAVAHLMENIIDSTRLVDSWKESPDEDDQQRIANVNELLS 513          
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Match: A0A518I4Q8_9PLAN (DNA helicase n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I4Q8_9PLAN)

HSP 1 Score: 299 bits (766), Expect = 9.550e-95
Identity = 149/173 (86.13%), Postives = 163/173 (94.22%), Query Frame = 0
Query:    1 DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLAYLKLINNPDDRVAFGRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCSTLSKRAATMVARFAKMISGFSLADTGSVAQLMEVVIDSTRMIDSWKESPDEDDQQRIANVNELVS 173
            DRG++++TDFA+FYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLL+YLKLINNPDDRVAF RIVNKPLRGIGK TQ KLIRWA+EKG SLLEAAHQA DC  LSKRA+ MVARFAKMISGFS+AD+GSVA LME VIDSTR+IDSWKESPDE+DQQRI+NVNEL+S
Sbjct:  341 DRGDYDFTDFAVFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLSYLKLINNPDDRVAFSRIVNKPLRGIGKATQNKLIRWAEEKGFSLLEAAHQAKDCPALSKRASNMVARFAKMISGFSMADSGSVAHLMEAVIDSTRLIDSWKESPDEEDQQRISNVNELLS 513          
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Match: A0A517W4P8_9PLAN (DNA helicase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W4P8_9PLAN)

HSP 1 Score: 297 bits (761), Expect = 5.260e-94
Identity = 147/173 (84.97%), Postives = 164/173 (94.80%), Query Frame = 0
Query:    1 DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLAYLKLINNPDDRVAFGRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCSTLSKRAATMVARFAKMISGFSLADTGSVAQLMEVVIDSTRMIDSWKESPDEDDQQRIANVNELVS 173
            D+ +F+Y+DFAIFYRVNSLSRELELALAR+KIPYQLAGSVAFYERTEVKDLL+YLKLINNPDDR+AF RIVNKPLRGIGKTTQ KLIRWADE+G+ LLEAAHQA DC TLSKRA+TMVARFAKMIS FS+AD+GSVA LME +IDSTR++DSWKESPDE+DQQRIANVNEL+S
Sbjct:  341 DQEDFDYSDFAIFYRVNSLSRELELALARYKIPYQLAGSVAFYERTEVKDLLSYLKLINNPDDRIAFSRIVNKPLRGIGKTTQNKLIRWADERGVRLLEAAHQATDCPTLSKRASTMVARFAKMISSFSMADSGSVAHLMEAIIDSTRLVDSWKESPDEEDQQRIANVNELLS 513          
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Match: A0A3D4PM13_9PLAN (DNA helicase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3D4PM13_9PLAN)

HSP 1 Score: 201 bits (511), Expect = 1.190e-59
Identity = 101/173 (58.38%), Postives = 133/173 (76.88%), Query Frame = 0
Query:    1 DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLAYLKLINNPDDRVAFGRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCSTLSKRAATMVARFAKMISGFSLADTGSVAQLMEVVIDSTRMIDSWKESPDEDDQQRIANVNELVS 173
            + GE +++DFAIFYRVNS+SR+LELAL RH +PYQ+A  VAFY+R EV+DLLAYL LINNP +R AF R+VN PLRGIGKT+Q +L+ +A++KG++ +EAA QA     + KRAA  +  FA+M+  FSLAD+GSVAQL+E V++ T     W  S +E D QR+ANV+ELVS
Sbjct:   87 ESGERDWSDFAIFYRVNSISRQLELALGRHHVPYQVAAGVAFYQRAEVRDLLAYLDLINNPQNRAAFVRVVNVPLRGIGKTSQSRLMNFAEDKGLTYIEAALQADQVPKMPKRAAASLKAFARMMENFSLADSGSVAQLIEDVVEKTGYTRPWSSSQNEQDMQRLANVDELVS 259          
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Match: A0A5C5XAA7_9PLAN (DNA helicase n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A5C5XAA7_9PLAN)

HSP 1 Score: 200 bits (509), Expect = 3.350e-57
Identity = 99/173 (57.23%), Postives = 132/173 (76.30%), Query Frame = 0
Query:    1 DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLAYLKLINNPDDRVAFGRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCSTLSKRAATMVARFAKMISGFSLADTGSVAQLMEVVIDSTRMIDSWKESPDEDDQQRIANVNELVS 173
            + GE ++ DFAIFYRVNS+SR+LELAL RH +PYQ+A  VAFY+R EV+DLLAYL L+NNP +R AF R+VN PLRGIGKT+Q +L+ +A++KG++ +EAA QA +   + KRAA  +  FA+M+  FSLAD+GSVAQL+E V++ T     W  S +E D QR+ANV EL+S
Sbjct:  344 ESGERDWLDFAIFYRVNSISRQLELALGRHHVPYQVAAGVAFYQRAEVRDLLAYLDLVNNPQNRAAFVRVVNVPLRGIGKTSQSRLMNYAEDKGLTYIEAALQADEVPKMPKRAAASLKAFARMMENFSLADSGSVAQLIEDVVEKTGYTRPWSSSQNEQDMQRLANVEELIS 516          
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Match: UPI001EE7F6F4 (UvrD-helicase domain-containing protein n=1 Tax=Rubinisphaera sp. ICM_H10 TaxID=2909586 RepID=UPI001EE7F6F4)

HSP 1 Score: 200 bits (508), Expect = 4.650e-57
Identity = 98/173 (56.65%), Postives = 133/173 (76.88%), Query Frame = 0
Query:    1 DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLAYLKLINNPDDRVAFGRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCSTLSKRAATMVARFAKMISGFSLADTGSVAQLMEVVIDSTRMIDSWKESPDEDDQQRIANVNELVS 173
            D GE +++DFAIFYRVNS+SR+LELAL+RH +PYQ+A  VAFY+R EV+DL+ YL L+NNP +R AF R+VN PLRGIGKT+Q +L  +AD+KGIS ++AA +A +   + KRAA  +  FA+M+ GFS+AD+GSVAQL+E ++D T     W  S +E D QR+ANV EL++
Sbjct:  344 DSGERKWSDFAIFYRVNSISRQLELALSRHHVPYQVAAGVAFYQRAEVRDLIGYLDLVNNPANRTAFMRVVNTPLRGIGKTSQHRLTSFADDKGISYIDAALRADEVPKMPKRAAASLKAFARMMQGFSVADSGSVAQLIEDIVDKTGYTRPWSSSQNEQDLQRLANVEELIA 516          
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Match: A0A3B1DI01_9ZZZZ (DNA helicase (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DI01_9ZZZZ)

HSP 1 Score: 194 bits (492), Expect = 2.820e-55
Identity = 96/170 (56.47%), Postives = 129/170 (75.88%), Query Frame = 0
Query:    4 EFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLAYLKLINNPDDRVAFGRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCSTLSKRAATMVARFAKMISGFSLADTGSVAQLMEVVIDSTRMIDSWKESPDEDDQQRIANVNELVS 173
            E  ++DFA+FYRVN++SRE+E A  R+++PYQ+AG VAFY+R EVKD+++YL++I NPDDRVA  RI+NKPLR IGKTTQ KL RW D +GI+ L+AA +A +  TLSKRA T +  FAKM+  FSLAD GS+A L++ +ID      +W+ S DE D Q++ANV EL +
Sbjct:  245 ERAWSDFALFYRVNAMSREMEFAFTRNRVPYQIAGGVAFYDRAEVKDIISYLRVIENPDDRVALRRIINKPLRQIGKTTQDKLFRWGDTQGINGLDAAKRANEIPTLSKRAITSLKAFAKMMQEFSLADAGSIADLIKKIIDRVGYTRAWEGSHDERDIQKLANVKELTT 414          
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Match: A0A5C5VY68_9PLAN (DNA helicase n=1 Tax=Thalassoglobus neptunius TaxID=1938619 RepID=A0A5C5VY68_9PLAN)

HSP 1 Score: 192 bits (488), Expect = 2.770e-54
Identity = 94/173 (54.34%), Postives = 130/173 (75.14%), Query Frame = 0
Query:    1 DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLAYLKLINNPDDRVAFGRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCSTLSKRAATMVARFAKMISGFSLADTGSVAQLMEVVIDSTRMIDSWKESPDEDDQQRIANVNELVS 173
            D G+++++D AIFYRVN+LSR++E AL RH++P+Q+A  VAFY+R E+KDLLAYL+L+ NP D  AF RIVNKPLRG+GKT+Q +L+RWA    ++ LEA  +A++   LSKRA     RFA+MI+GFSLA  GSV  L+  +ID T  +  W+ SP+E D +++ANV ELV+
Sbjct:  343 DTGDYQWSDVAIFYRVNALSRQVETALMRHRVPFQVASGVAFYDRAEIKDLLAYLRLVENPLDHTAFLRIVNKPLRGLGKTSQNRLLRWAQLNHLTPLEACVRASEVPKLSKRAIVGFRRFAEMINGFSLAGAGSVGDLLVEIIDKTYFVAPWQGSPNEADAEKVANVEELVA 515          
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Match: F0SHI4_RUBBR (DNA helicase n=2 Tax=Rubinisphaera TaxID=1649490 RepID=F0SHI4_RUBBR)

HSP 1 Score: 189 bits (479), Expect = 6.500e-53
Identity = 96/168 (57.14%), Postives = 128/168 (76.19%), Query Frame = 0
Query:    6 EYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLAYLKLINNPDDRVAFGRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCSTLSKRAATMVARFAKMISGFSLADTGSVAQLMEVVIDSTRMIDSWKESPDEDDQQRIANVNELVS 173
            +++DFAIFYRVNSLSR+LELAL RH +PYQ+A  VAFY+R EV+D+L YL+LINNP +R AF R+VN PLRGIGKT+Q +L+ +A++  +S LEAA +A     +SKRAA  +  F++M+SGFSLA++GSVA L+E V+  T     W  +P E D QR ANV+EL+S
Sbjct:  356 DWSDFAIFYRVNSLSRQLELALGRHHVPYQVAAGVAFYQRAEVRDVLQYLELINNPRNRPAFMRVVNTPLRGIGKTSQNRLMSYAEQHNMSYLEAAAEADKVPKMSKRAAASLKAFSRMMSGFSLANSGSVANLIEDVVTQTDYCKQWLSNPSEQDLQRQANVDELIS 523          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517ZZ80_9PLAN1.700e-10395.38DNA helicase n=8 Tax=Gimesia TaxID=1649453 RepID=A... [more]
A0A517V640_9PLAN8.960e-9686.71DNA helicase n=8 Tax=Planctomycetaceae TaxID=126 R... [more]
A0A518I4Q8_9PLAN9.550e-9586.13DNA helicase n=2 Tax=Gimesia TaxID=1649453 RepID=A... [more]
A0A517W4P8_9PLAN5.260e-9484.97DNA helicase n=2 Tax=Gimesia aquarii TaxID=2527964... [more]
A0A3D4PM13_9PLAN1.190e-5958.38DNA helicase (Fragment) n=1 Tax=Planctomycetaceae ... [more]
A0A5C5XAA7_9PLAN3.350e-5757.23DNA helicase n=4 Tax=Planctomycetaceae TaxID=126 R... [more]
UPI001EE7F6F44.650e-5756.65UvrD-helicase domain-containing protein n=1 Tax=Ru... [more]
A0A3B1DI01_9ZZZZ2.820e-5556.47DNA helicase (Fragment) n=1 Tax=hydrothermal vent ... [more]
A0A5C5VY68_9PLAN2.770e-5454.34DNA helicase n=1 Tax=Thalassoglobus neptunius TaxI... [more]
F0SHI4_RUBBR6.500e-5357.14DNA helicase n=2 Tax=Rubinisphaera TaxID=1649490 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014017UvrD-like DNA helicase, C-terminalPFAMPF13361UvrD_Ccoord: 5..105
e-value: 9.3E-22
score: 77.9
IPR014017UvrD-like DNA helicase, C-terminalPROSITEPS51217UVRD_HELICASE_CTERcoord: 1..173
score: 15.016
NoneNo IPR availableGENE3D1.10.486.10coord: 44..173
e-value: 3.4E-39
score: 136.5
NoneNo IPR availableGENE3D3.40.50.300coord: 1..43
e-value: 2.4E-8
score: 36.1
NoneNo IPR availablePANTHERPTHR11070:SF47ATP-DEPENDENT DNA HELICASE REPcoord: 5..173
IPR000212DNA helicase, UvrD/REP typePANTHERPTHR11070UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBERcoord: 5..173
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124240contigM-pyrifera_M_contig124240:1..519 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124240.4938.1mRNA_M-pyrifera_M_contig124240.4938.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124240 1..519 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124240.4938.1 ID=prot_M-pyrifera_M_contig124240.4938.1|Name=mRNA_M-pyrifera_M_contig124240.4938.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=173bp
DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKD
LLAYLKLINNPDDRVAFGRIVNKPLRGIGKTTQRKLIRWADEKGISLLEA
AHQAADCSTLSKRAATMVARFAKMISGFSLADTGSVAQLMEVVIDSTRMI
DSWKESPDEDDQQRIANVNELVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014017DNA_helicase_UvrD-like_C
IPR000212DNA_helicase_UvrD/REP
IPR027417P-loop_NTPase