mRNA_M-pyrifera_M_contig124240.4938.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Match: A0A517ZZ80_9PLAN (DNA helicase n=8 Tax=Gimesia TaxID=1649453 RepID=A0A517ZZ80_9PLAN) HSP 1 Score: 322 bits (825), Expect = 1.700e-103 Identity = 165/173 (95.38%), Postives = 170/173 (98.27%), Query Frame = 1
Query: 1 DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLAYLKLINNPDDRVAFGRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCSTLSKRAATMVARFAKMISGFSLADTGSVAQLMEVVIDSTRMIDSWKESPDEDDQQRIANVNELVS 519
DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLL+YLKLINNPDDRVAF RIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADC LSKRAATMVARFAKMISGFSLAD+GSVAQLME+VIDSTR+IDSWKESPDE+DQQRIANVNELVS
Sbjct: 341 DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLSYLKLINNPDDRVAFSRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCPALSKRAATMVARFAKMISGFSLADSGSVAQLMELVIDSTRLIDSWKESPDEEDQQRIANVNELVS 513
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Match: A0A517V640_9PLAN (DNA helicase n=8 Tax=Planctomycetaceae TaxID=126 RepID=A0A517V640_9PLAN) HSP 1 Score: 302 bits (773), Expect = 8.960e-96 Identity = 150/173 (86.71%), Postives = 165/173 (95.38%), Query Frame = 1
Query: 1 DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLAYLKLINNPDDRVAFGRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCSTLSKRAATMVARFAKMISGFSLADTGSVAQLMEVVIDSTRMIDSWKESPDEDDQQRIANVNELVS 519
D+G+ YTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLL+YLKL+NNPDDR+AF RIVNKPLRGIGKTTQ KLIRWADE+GISLLEAAHQAADC LSKRAATM+ARFAKMI+GFS+AD+G+VA LME +IDSTR++DSWKESPDEDDQQRIANVNEL+S
Sbjct: 341 DQGDHAYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLSYLKLVNNPDDRIAFSRIVNKPLRGIGKTTQNKLIRWADERGISLLEAAHQAADCPKLSKRAATMLARFAKMINGFSMADSGAVAHLMENIIDSTRLVDSWKESPDEDDQQRIANVNELLS 513
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Match: A0A518I4Q8_9PLAN (DNA helicase n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I4Q8_9PLAN) HSP 1 Score: 299 bits (766), Expect = 9.550e-95 Identity = 149/173 (86.13%), Postives = 163/173 (94.22%), Query Frame = 1
Query: 1 DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLAYLKLINNPDDRVAFGRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCSTLSKRAATMVARFAKMISGFSLADTGSVAQLMEVVIDSTRMIDSWKESPDEDDQQRIANVNELVS 519
DRG++++TDFA+FYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLL+YLKLINNPDDRVAF RIVNKPLRGIGK TQ KLIRWA+EKG SLLEAAHQA DC LSKRA+ MVARFAKMISGFS+AD+GSVA LME VIDSTR+IDSWKESPDE+DQQRI+NVNEL+S
Sbjct: 341 DRGDYDFTDFAVFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLSYLKLINNPDDRVAFSRIVNKPLRGIGKATQNKLIRWAEEKGFSLLEAAHQAKDCPALSKRASNMVARFAKMISGFSMADSGSVAHLMEAVIDSTRLIDSWKESPDEEDQQRISNVNELLS 513
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Match: A0A517W4P8_9PLAN (DNA helicase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W4P8_9PLAN) HSP 1 Score: 297 bits (761), Expect = 5.260e-94 Identity = 147/173 (84.97%), Postives = 164/173 (94.80%), Query Frame = 1
Query: 1 DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLAYLKLINNPDDRVAFGRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCSTLSKRAATMVARFAKMISGFSLADTGSVAQLMEVVIDSTRMIDSWKESPDEDDQQRIANVNELVS 519
D+ +F+Y+DFAIFYRVNSLSRELELALAR+KIPYQLAGSVAFYERTEVKDLL+YLKLINNPDDR+AF RIVNKPLRGIGKTTQ KLIRWADE+G+ LLEAAHQA DC TLSKRA+TMVARFAKMIS FS+AD+GSVA LME +IDSTR++DSWKESPDE+DQQRIANVNEL+S
Sbjct: 341 DQEDFDYSDFAIFYRVNSLSRELELALARYKIPYQLAGSVAFYERTEVKDLLSYLKLINNPDDRIAFSRIVNKPLRGIGKTTQNKLIRWADERGVRLLEAAHQATDCPTLSKRASTMVARFAKMISSFSMADSGSVAHLMEAIIDSTRLVDSWKESPDEEDQQRIANVNELLS 513
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Match: A0A3D4PM13_9PLAN (DNA helicase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3D4PM13_9PLAN) HSP 1 Score: 201 bits (511), Expect = 1.190e-59 Identity = 101/173 (58.38%), Postives = 133/173 (76.88%), Query Frame = 1
Query: 1 DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLAYLKLINNPDDRVAFGRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCSTLSKRAATMVARFAKMISGFSLADTGSVAQLMEVVIDSTRMIDSWKESPDEDDQQRIANVNELVS 519
+ GE +++DFAIFYRVNS+SR+LELAL RH +PYQ+A VAFY+R EV+DLLAYL LINNP +R AF R+VN PLRGIGKT+Q +L+ +A++KG++ +EAA QA + KRAA + FA+M+ FSLAD+GSVAQL+E V++ T W S +E D QR+ANV+ELVS
Sbjct: 87 ESGERDWSDFAIFYRVNSISRQLELALGRHHVPYQVAAGVAFYQRAEVRDLLAYLDLINNPQNRAAFVRVVNVPLRGIGKTSQSRLMNFAEDKGLTYIEAALQADQVPKMPKRAAASLKAFARMMENFSLADSGSVAQLIEDVVEKTGYTRPWSSSQNEQDMQRLANVDELVS 259
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Match: A0A5C5XAA7_9PLAN (DNA helicase n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A5C5XAA7_9PLAN) HSP 1 Score: 200 bits (509), Expect = 3.350e-57 Identity = 99/173 (57.23%), Postives = 132/173 (76.30%), Query Frame = 1
Query: 1 DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLAYLKLINNPDDRVAFGRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCSTLSKRAATMVARFAKMISGFSLADTGSVAQLMEVVIDSTRMIDSWKESPDEDDQQRIANVNELVS 519
+ GE ++ DFAIFYRVNS+SR+LELAL RH +PYQ+A VAFY+R EV+DLLAYL L+NNP +R AF R+VN PLRGIGKT+Q +L+ +A++KG++ +EAA QA + + KRAA + FA+M+ FSLAD+GSVAQL+E V++ T W S +E D QR+ANV EL+S
Sbjct: 344 ESGERDWLDFAIFYRVNSISRQLELALGRHHVPYQVAAGVAFYQRAEVRDLLAYLDLVNNPQNRAAFVRVVNVPLRGIGKTSQSRLMNYAEDKGLTYIEAALQADEVPKMPKRAAASLKAFARMMENFSLADSGSVAQLIEDVVEKTGYTRPWSSSQNEQDMQRLANVEELIS 516
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Match: UPI001EE7F6F4 (UvrD-helicase domain-containing protein n=1 Tax=Rubinisphaera sp. ICM_H10 TaxID=2909586 RepID=UPI001EE7F6F4) HSP 1 Score: 200 bits (508), Expect = 4.650e-57 Identity = 98/173 (56.65%), Postives = 133/173 (76.88%), Query Frame = 1
Query: 1 DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLAYLKLINNPDDRVAFGRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCSTLSKRAATMVARFAKMISGFSLADTGSVAQLMEVVIDSTRMIDSWKESPDEDDQQRIANVNELVS 519
D GE +++DFAIFYRVNS+SR+LELAL+RH +PYQ+A VAFY+R EV+DL+ YL L+NNP +R AF R+VN PLRGIGKT+Q +L +AD+KGIS ++AA +A + + KRAA + FA+M+ GFS+AD+GSVAQL+E ++D T W S +E D QR+ANV EL++
Sbjct: 344 DSGERKWSDFAIFYRVNSISRQLELALSRHHVPYQVAAGVAFYQRAEVRDLIGYLDLVNNPANRTAFMRVVNTPLRGIGKTSQHRLTSFADDKGISYIDAALRADEVPKMPKRAAASLKAFARMMQGFSVADSGSVAQLIEDIVDKTGYTRPWSSSQNEQDLQRLANVEELIA 516
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Match: A0A3B1DI01_9ZZZZ (DNA helicase (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DI01_9ZZZZ) HSP 1 Score: 194 bits (492), Expect = 2.820e-55 Identity = 96/170 (56.47%), Postives = 129/170 (75.88%), Query Frame = 1
Query: 10 EFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLAYLKLINNPDDRVAFGRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCSTLSKRAATMVARFAKMISGFSLADTGSVAQLMEVVIDSTRMIDSWKESPDEDDQQRIANVNELVS 519
E ++DFA+FYRVN++SRE+E A R+++PYQ+AG VAFY+R EVKD+++YL++I NPDDRVA RI+NKPLR IGKTTQ KL RW D +GI+ L+AA +A + TLSKRA T + FAKM+ FSLAD GS+A L++ +ID +W+ S DE D Q++ANV EL +
Sbjct: 245 ERAWSDFALFYRVNAMSREMEFAFTRNRVPYQIAGGVAFYDRAEVKDIISYLRVIENPDDRVALRRIINKPLRQIGKTTQDKLFRWGDTQGINGLDAAKRANEIPTLSKRAITSLKAFAKMMQEFSLADAGSIADLIKKIIDRVGYTRAWEGSHDERDIQKLANVKELTT 414
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Match: A0A5C5VY68_9PLAN (DNA helicase n=1 Tax=Thalassoglobus neptunius TaxID=1938619 RepID=A0A5C5VY68_9PLAN) HSP 1 Score: 192 bits (488), Expect = 2.770e-54 Identity = 94/173 (54.34%), Postives = 130/173 (75.14%), Query Frame = 1
Query: 1 DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLAYLKLINNPDDRVAFGRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCSTLSKRAATMVARFAKMISGFSLADTGSVAQLMEVVIDSTRMIDSWKESPDEDDQQRIANVNELVS 519
D G+++++D AIFYRVN+LSR++E AL RH++P+Q+A VAFY+R E+KDLLAYL+L+ NP D AF RIVNKPLRG+GKT+Q +L+RWA ++ LEA +A++ LSKRA RFA+MI+GFSLA GSV L+ +ID T + W+ SP+E D +++ANV ELV+
Sbjct: 343 DTGDYQWSDVAIFYRVNALSRQVETALMRHRVPFQVASGVAFYDRAEIKDLLAYLRLVENPLDHTAFLRIVNKPLRGLGKTSQNRLLRWAQLNHLTPLEACVRASEVPKLSKRAIVGFRRFAEMINGFSLAGAGSVGDLLVEIIDKTYFVAPWQGSPNEADAEKVANVEELVA 515
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Match: F0SHI4_RUBBR (DNA helicase n=2 Tax=Rubinisphaera TaxID=1649490 RepID=F0SHI4_RUBBR) HSP 1 Score: 189 bits (479), Expect = 6.500e-53 Identity = 96/168 (57.14%), Postives = 128/168 (76.19%), Query Frame = 1
Query: 16 EYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLAYLKLINNPDDRVAFGRIVNKPLRGIGKTTQRKLIRWADEKGISLLEAAHQAADCSTLSKRAATMVARFAKMISGFSLADTGSVAQLMEVVIDSTRMIDSWKESPDEDDQQRIANVNELVS 519
+++DFAIFYRVNSLSR+LELAL RH +PYQ+A VAFY+R EV+D+L YL+LINNP +R AF R+VN PLRGIGKT+Q +L+ +A++ +S LEAA +A +SKRAA + F++M+SGFSLA++GSVA L+E V+ T W +P E D QR ANV+EL+S
Sbjct: 356 DWSDFAIFYRVNSLSRQLELALGRHHVPYQVAAGVAFYQRAEVRDVLQYLELINNPRNRPAFMRVVNTPLRGIGKTSQNRLMSYAEQHNMSYLEAAAEADKVPKMSKRAAASLKAFSRMMSGFSLANSGSVANLIEDVVTQTDYCKQWLSNPSEQDLQRQANVDELIS 523 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124240.4938.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124240.4938.1 >prot_M-pyrifera_M_contig124240.4938.1 ID=prot_M-pyrifera_M_contig124240.4938.1|Name=mRNA_M-pyrifera_M_contig124240.4938.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=173bp DRGEFEYTDFAIFYRVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDback to top mRNA from alignment at M-pyrifera_M_contig124240:1..519- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124240.4938.1 ID=mRNA_M-pyrifera_M_contig124240.4938.1|Name=mRNA_M-pyrifera_M_contig124240.4938.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=519bp|location=Sequence derived from alignment at M-pyrifera_M_contig124240:1..519- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124240:1..519- >mRNA_M-pyrifera_M_contig124240.4938.1 ID=mRNA_M-pyrifera_M_contig124240.4938.1|Name=mRNA_M-pyrifera_M_contig124240.4938.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1038bp|location=Sequence derived from alignment at M-pyrifera_M_contig124240:1..519- (Macrocystis pyrifera P11B4 male)back to top |