mRNA_M-pyrifera_M_contig124210.4931.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Match: A0A352IP13_9GAMM (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Marinobacter adhaerens TaxID=1033846 RepID=A0A352IP13_9GAMM) HSP 1 Score: 345 bits (884), Expect = 7.390e-114 Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 1
Query: 1 HKMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 519
HKMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEEL EDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE
Sbjct: 292 HKMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELDEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 464
BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Match: E4PNF8_MARAH (Isoleucine--tRNA ligase n=44 Tax=Marinobacter TaxID=2742 RepID=E4PNF8_MARAH) HSP 1 Score: 345 bits (884), Expect = 1.550e-110 Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 1
Query: 1 HKMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 519
HKMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEEL EDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE
Sbjct: 604 HKMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELDEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 776
BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Match: A0A139D253_9GAMM (Isoleucyl-tRNA synthetase (Fragment) n=2 Tax=Marinobacter sp. T13-3 TaxID=1794906 RepID=A0A139D253_9GAMM) HSP 1 Score: 325 bits (833), Expect = 1.750e-109 Identity = 160/173 (92.49%), Postives = 168/173 (97.11%), Query Frame = 1
Query: 1 HKMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 519
HKMSKS GNVIAPQEVMNELGADILRLWVAATDYSGEMTVSK IL+QTADGYRRIRNTSRFLLSNLTGFDP +HMVAPEDMIALDRWMVD+ALQLQ+E+HED+GNYAFLRIY KVYNFCE+TLGGFYLDIIKDRQYTTQADSLARRS QTAL+HVAEALVRWIAPILSFTADE
Sbjct: 94 HKMSKSRGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKGILKQTADGYRRIRNTSRFLLSNLTGFDPAKHMVAPEDMIALDRWMVDKALQLQKEIHEDFGNYAFLRIYHKVYNFCESTLGGFYLDIIKDRQYTTQADSLARRSAQTALFHVAEALVRWIAPILSFTADE 266
BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Match: SYI_MARN8 (Isoleucine--tRNA ligase n=50 Tax=Marinobacter TaxID=2742 RepID=SYI_MARN8) HSP 1 Score: 339 bits (869), Expect = 2.510e-108 Identity = 167/173 (96.53%), Postives = 172/173 (99.42%), Query Frame = 1
Query: 1 HKMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 519
+KMSKSLGNVIAPQEVMNELGADILRLWV+ATDYSGEM+VSKDILRQTADGYRRIRNT+RFLLSNLTGFDP+QHMVAPEDMIALDRWMVDRALQLQ ELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE
Sbjct: 604 YKMSKSLGNVIAPQEVMNELGADILRLWVSATDYSGEMSVSKDILRQTADGYRRIRNTARFLLSNLTGFDPDQHMVAPEDMIALDRWMVDRALQLQNELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 776
BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Match: UPI001107D2DD (isoleucine--tRNA ligase n=1 Tax=Marinobacter alexandrii TaxID=2570351 RepID=UPI001107D2DD) HSP 1 Score: 332 bits (850), Expect = 1.560e-105 Identity = 165/173 (95.38%), Postives = 168/173 (97.11%), Query Frame = 1
Query: 1 HKMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 519
HKMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNL+GFDPEQH VAPEDMIALDRWMVDRALQLQ EL +DY NYAFLRIYQKVYNFCE+TLGGFYLDIIKDRQYTT ADSLARRSCQTALYHVAEALVRWIAPILSFTADE
Sbjct: 604 HKMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLSGFDPEQHTVAPEDMIALDRWMVDRALQLQNELQDDYQNYAFLRIYQKVYNFCESTLGGFYLDIIKDRQYTTPADSLARRSCQTALYHVAEALVRWIAPILSFTADE 776
BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Match: UPI0019D425C0 (isoleucine--tRNA ligase n=1 Tax=Marinobacter sp. LPB0319 TaxID=2769486 RepID=UPI0019D425C0) HSP 1 Score: 331 bits (849), Expect = 2.190e-105 Identity = 164/173 (94.80%), Postives = 168/173 (97.11%), Query Frame = 1
Query: 1 HKMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 519
HKMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNT+RFLLSNLTGFDPEQHMVAP++MIALDRWMVDR LQLQ EL EDY NYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTT ADSLARRSCQTALYHVAEA+VRWIAPILSFTADE
Sbjct: 604 HKMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTARFLLSNLTGFDPEQHMVAPKEMIALDRWMVDRTLQLQNELQEDYENYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTPADSLARRSCQTALYHVAEAMVRWIAPILSFTADE 776
BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Match: A0A1I0GRC5_9GAMM (Isoleucine--tRNA ligase n=3 Tax=Marinobacter TaxID=2742 RepID=A0A1I0GRC5_9GAMM) HSP 1 Score: 329 bits (844), Expect = 1.190e-104 Identity = 163/172 (94.77%), Postives = 168/172 (97.67%), Query Frame = 1
Query: 4 KMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 519
KMSKSLGNVIAPQEVMNELGADILRLWV+ATDYSGEMTVSKDIL+QTADGYRRIRNT+RFLLSNLTGFDP +HMV PEDMIALDRWMVDRALQLQ EL+EDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTT ADSLARRSCQTALYHVAEALVRWIAPILSFTADE
Sbjct: 605 KMSKSLGNVIAPQEVMNELGADILRLWVSATDYSGEMTVSKDILKQTADGYRRIRNTARFLLSNLTGFDPAEHMVMPEDMIALDRWMVDRALQLQNELNEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTPADSLARRSCQTALYHVAEALVRWIAPILSFTADE 776
BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Match: M7CPE7_9GAMM (Isoleucine--tRNA ligase n=5 Tax=Marinobacter TaxID=2742 RepID=M7CPE7_9GAMM) HSP 1 Score: 328 bits (840), Expect = 4.590e-104 Identity = 164/172 (95.35%), Postives = 166/172 (96.51%), Query Frame = 1
Query: 4 KMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 519
KMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNT+RFLLSNL GFDP QHMV P DMIALDRWMVDRALQLQ EL+EDY NYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE
Sbjct: 605 KMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTARFLLSNLNGFDPAQHMVEPADMIALDRWMVDRALQLQNELNEDYQNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 776
BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Match: A0A1M6VVA4_9GAMM (Isoleucine--tRNA ligase n=17 Tax=root TaxID=1 RepID=A0A1M6VVA4_9GAMM) HSP 1 Score: 327 bits (839), Expect = 6.440e-104 Identity = 162/172 (94.19%), Postives = 168/172 (97.67%), Query Frame = 1
Query: 4 KMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 519
KMSKSLGNVIAPQEVMNELGADILRLWV+ATDYSGEMTVSKDILRQTADGYRRIRNTSRFL+SNLTGFDP+QHMVAP++MIALDRWMVDRA QLQ ELHEDY NY FLRIYQKVY+FCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE
Sbjct: 605 KMSKSLGNVIAPQEVMNELGADILRLWVSATDYSGEMTVSKDILRQTADGYRRIRNTSRFLMSNLTGFDPKQHMVAPDEMIALDRWMVDRAQQLQNELHEDYQNYDFLRIYQKVYSFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 776
BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Match: A0A1V2DVH6_9GAMM (Isoleucine--tRNA ligase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1V2DVH6_9GAMM) HSP 1 Score: 327 bits (839), Expect = 6.440e-104 Identity = 162/172 (94.19%), Postives = 167/172 (97.09%), Query Frame = 1
Query: 4 KMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 519
KMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNT+RFLLSNL GFDPEQHMVAPE MIALDRW+VDR LQLQEEL EDYGNYAFLRIYQK+YNFCEATLGGFYLDIIKDRQYTT+ADSLARRSCQTA+YHV EALVRWIAPILSFTADE
Sbjct: 605 KMSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTARFLLSNLNGFDPEQHMVAPEAMIALDRWIVDRTLQLQEELTEDYGNYAFLRIYQKIYNFCEATLGGFYLDIIKDRQYTTRADSLARRSCQTAMYHVIEALVRWIAPILSFTADE 776 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124210.4931.1 >prot_M-pyrifera_M_contig124210.4931.1 ID=prot_M-pyrifera_M_contig124210.4931.1|Name=mRNA_M-pyrifera_M_contig124210.4931.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=171bp MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYback to top mRNA from alignment at M-pyrifera_M_contig124210:2..520+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124210.4931.1 ID=mRNA_M-pyrifera_M_contig124210.4931.1|Name=mRNA_M-pyrifera_M_contig124210.4931.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=519bp|location=Sequence derived from alignment at M-pyrifera_M_contig124210:2..520+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124210:2..520+ >mRNA_M-pyrifera_M_contig124210.4931.1 ID=mRNA_M-pyrifera_M_contig124210.4931.1|Name=mRNA_M-pyrifera_M_contig124210.4931.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1026bp|location=Sequence derived from alignment at M-pyrifera_M_contig124210:2..520+ (Macrocystis pyrifera P11B4 male)back to top |