prot_M-pyrifera_M_contig124205.4930.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124205.4930.1
Unique Nameprot_M-pyrifera_M_contig124205.4930.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length75
Homology
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Match: A0A6B2LBL7_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LBL7_9EUKA)

HSP 1 Score: 95.5 bits (236), Expect = 3.400e-22
Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = 0
Query:    1 VSELQCGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSESSLSKSLFVRKYIDELLVHCR 70
            + ELQC ICL LLS P QC NGHLFC TC+L  I+R  +CP CRC LSE+ LS+SLFV K+I+ L ++C+
Sbjct:   20 LQELQCAICLGLLSHPRQCKNGHLFCETCVLRSIQRSPKCPSCRCPLSENELSRSLFVEKHINTLNLYCK 89          
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Match: A0A6B2L4X5_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L4X5_9EUKA)

HSP 1 Score: 95.5 bits (236), Expect = 1.630e-21
Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = 0
Query:    1 VSELQCGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSESSLSKSLFVRKYIDELLVHCR 70
            + ELQC ICL LLS P QC NGHLFC TC+L  I+R  +CP CRC LSE+ LS+SLFV K+I+ L ++C+
Sbjct:   20 LQELQCAICLGLLSHPRQCKNGHLFCETCVLRSIQRSPKCPSCRCPLSENELSRSLFVEKHINTLNLYCK 89          
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Match: F4Q7L0_CAVFA (RGS-containing protein kinase RCK1 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q7L0_CAVFA)

HSP 1 Score: 81.6 bits (200), Expect = 1.830e-16
Identity = 33/71 (46.48%), Postives = 50/71 (70.42%), Query Frame = 0
Query:    1 VSELQCGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSESSLSKSLFVRKYIDELLVHCRF 71
            V ELQCGICL +++ P QC+ GHL+C+ CI + +++  ECP CR  L+   LS+SLFV +++  L V C++
Sbjct:   16 VKELQCGICLQIINKPRQCLQGHLYCLDCISQYLKKSQECPTCRTSLNVEKLSRSLFVERHLRNLNVWCKY 86          
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Match: A0A6S7LVL3_PARCT (E3 ubiquitin- ligase PDZRN3-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7LVL3_PARCT)

HSP 1 Score: 63.5 bits (153), Expect = 9.670e-11
Identity = 30/65 (46.15%), Postives = 40/65 (61.54%), Query Frame = 0
Query:    6 CGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSESSLSK-SLFVRKYIDELLVHC 69
            C IC D+L DP QC N HLFC  CI E ++    CP C  +L+E +LSK +  V  Y+D L++ C
Sbjct:   23 CPICTDVLKDPVQCHNQHLFCRACITEHLKNSQTCPVCMQELTEEALSKPARIVTGYLDGLMIIC 87          
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Match: A0A7D9JY53_PARCT (E3 ubiquitin- ligase PDZRN3-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JY53_PARCT)

HSP 1 Score: 64.7 bits (156), Expect = 1.990e-10
Identity = 31/65 (47.69%), Postives = 40/65 (61.54%), Query Frame = 0
Query:    6 CGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSESSLSK-SLFVRKYIDELLVHC 69
            C IC D+L DP QC N HLFC TCI E ++    CP C   L+E +LSK +  V  Y+D+L + C
Sbjct:   21 CPICTDVLKDPVQCHNQHLFCRTCITEHLKNSHNCPVCMQVLTEEALSKPARIVSGYLDDLKISC 85          
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Match: A0A6S7JAD3_PARCT (TNF receptor-associated factor 6-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JAD3_PARCT)

HSP 1 Score: 64.7 bits (156), Expect = 1.990e-10
Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 0
Query:    6 CGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSESSLSK-SLFVRKYIDELLVHC 69
            C IC D+L DP QC N HLFC  CI E ++    CP C  +L+E +LSK +  V  Y+D L+V+C
Sbjct:   23 CPICTDVLKDPVQCHNQHLFCRACITEHLKNSQTCPVCMEKLTEEALSKPARIVTGYLDGLMVNC 87          
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Match: A0A7D9JLE9_PARCT (E3 ubiquitin- ligase PDZRN3-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JLE9_PARCT)

HSP 1 Score: 64.3 bits (155), Expect = 2.720e-10
Identity = 30/65 (46.15%), Postives = 40/65 (61.54%), Query Frame = 0
Query:    6 CGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSESSLSK-SLFVRKYIDELLVHC 69
            C IC D+L DP QC N HLFC  CI E ++    CP C  +L+E +LSK +  V  Y+D L++ C
Sbjct:   23 CPICTDVLKDPVQCHNQHLFCRACITEHLKNSQTCPVCMQELTEEALSKPARIVTGYLDGLMISC 87          
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Match: A0A6S7K095_PARCT (E3 ubiquitin- ligase NRDP1 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7K095_PARCT)

HSP 1 Score: 62.0 bits (149), Expect = 9.160e-10
Identity = 29/65 (44.62%), Postives = 39/65 (60.00%), Query Frame = 0
Query:    6 CGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSESSLSKS-LFVRKYIDELLVHC 69
            C IC D+L DP QC N HLFC  CI E ++    CP C  +L+E +LSK    V   +D L+++C
Sbjct:   21 CPICTDVLKDPVQCYNQHLFCRACITEHLKNSQTCPVCMEKLTEEALSKPPRIVTNILDGLMINC 85          
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Match: A0A7D9LAA5_PARCT (E3 ubiquitin- ligase PDZRN3-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LAA5_PARCT)

HSP 1 Score: 62.8 bits (151), Expect = 9.470e-10
Identity = 30/65 (46.15%), Postives = 39/65 (60.00%), Query Frame = 0
Query:    6 CGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSESSLSK-SLFVRKYIDELLVHC 69
            C IC D+L DP QC N HLFC  CI E ++    CP C  +L+E +LSK +  V  Y+D L + C
Sbjct:   23 CPICTDVLKDPVQCHNQHLFCRACITEHLKNSHNCPVCMQELTEEALSKPARIVTGYLDGLKISC 87          
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Match: A0A6S7JSM6_PARCT (E3 ubiquitin- ligase PDZRN3-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JSM6_PARCT)

HSP 1 Score: 62.4 bits (150), Expect = 1.300e-9
Identity = 30/65 (46.15%), Postives = 40/65 (61.54%), Query Frame = 0
Query:    6 CGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSESSLSK-SLFVRKYIDELLVHC 69
            C IC D+L DP QC N HLFC  CI E ++    CP C  +L+E +LSK +  V   +D L+V+C
Sbjct:   23 CPICTDVLKDPVQCHNQHLFCRACITEHLKNSQTCPVCMEKLTEEALSKPARIVTNILDGLMVNC 87          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124205.4930.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6B2LBL7_9EUKA3.400e-2260.00Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A6B2L4X5_9EUKA1.630e-2160.00Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
F4Q7L0_CAVFA1.830e-1646.48RGS-containing protein kinase RCK1 n=1 Tax=Cavende... [more]
A0A6S7LVL3_PARCT9.670e-1146.15E3 ubiquitin- ligase PDZRN3-like n=1 Tax=Paramuric... [more]
A0A7D9JY53_PARCT1.990e-1047.69E3 ubiquitin- ligase PDZRN3-like n=1 Tax=Paramuric... [more]
A0A6S7JAD3_PARCT1.990e-1047.69TNF receptor-associated factor 6-like n=1 Tax=Para... [more]
A0A7D9JLE9_PARCT2.720e-1046.15E3 ubiquitin- ligase PDZRN3-like n=1 Tax=Paramuric... [more]
A0A6S7K095_PARCT9.160e-1044.62E3 ubiquitin- ligase NRDP1 n=1 Tax=Paramuricea cla... [more]
A0A7D9LAA5_PARCT9.470e-1046.15E3 ubiquitin- ligase PDZRN3-like n=1 Tax=Paramuric... [more]
A0A6S7JSM6_PARCT1.300e-946.15E3 ubiquitin- ligase PDZRN3-like n=1 Tax=Paramuric... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..73
e-value: 2.3E-16
score: 61.8
NoneNo IPR availablePANTHERPTHR10131TNF RECEPTOR ASSOCIATED FACTORcoord: 2..72
NoneNo IPR availablePANTHERPTHR10131:SF92coord: 2..72
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 2..71
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 6..44
score: 9.804

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124205contigM-pyrifera_M_contig124205:271..495 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124205.4930.1mRNA_M-pyrifera_M_contig124205.4930.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124205 271..495 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124205.4930.1 ID=prot_M-pyrifera_M_contig124205.4930.1|Name=mRNA_M-pyrifera_M_contig124205.4930.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=75bp
VSELQCGICLDLLSDPCQCINGHLFCMTCILECIERKAECPQCRCQLSES
SLSKSLFVRKYIDELLVHCRFFYVQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING