prot_M-pyrifera_M_contig1242.4926.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1242.4926.1
Unique Nameprot_M-pyrifera_M_contig1242.4926.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length183
Homology
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BLAST of mRNA_M-pyrifera_M_contig1242.4926.1 vs. uniprot
Match: D7FL62_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL62_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 3.810e-52
Identity = 86/105 (81.90%), Postives = 99/105 (94.29%), Query Frame = 0 
Query:   43 MHGALATLGLVVALMTAAS-AFFVPGPSKIISGRPTRASTSQVIVMGRGDTRTTKGKRMRHTYGKCRPQKKREVVYFDGEVVVKAAPVARRWENIEYDESTLPKP 146
            MHGALATLGLVVA+M + S AF VPGPS+++SGR TRASTSQVIVMGRGDTRTTKGKRMRH+YGKCRPQK++EVVYF+GE+V KAAPVARRWENIEYDE+++PKP
Sbjct:    1 MHGALATLGLVVAMMASVSNAFVVPGPSQVVSGRSTRASTSQVIVMGRGDTRTTKGKRMRHSYGKCRPQKQKEVVYFEGEIVKKAAPVARRWENIEYDEASMPKP 105
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1242.4926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FL62_ECTSI3.810e-5281.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR03082630S ribosomal proteinTIGRFAMTIGR04560TIGR04560coord: 87..112
e-value: 1.1E-8
score: 32.9
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 66..183
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..65
NoneNo IPR availableTMHMMTMhelixcoord: 43..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1242contigM-pyrifera_M_contig1242:22182..25530 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1242.4926.1mRNA_M-pyrifera_M_contig1242.4926.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1242 22181..25530 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1242.4926.1 ID=prot_M-pyrifera_M_contig1242.4926.1|Name=mRNA_M-pyrifera_M_contig1242.4926.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp
EEPPPVPPDPKTLGALGPSLPRATADRSPIRAPRFLRSPAFTMHGALATL
GLVVALMTAASAFFVPGPSKIISGRPTRASTSQVIVMGRGDTRTTKGKRM
RHTYGKCRPQKKREVVYFDGEVVVKAAPVARRWENIEYDESTLPKPQAAV
DSESQSDGAEGGAEEEVVEAAPAEVAAAAAVPF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR030826Ribo_THX