mRNA_M-pyrifera_M_contig123973.4893.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig123973.4893.1
Unique NamemRNA_M-pyrifera_M_contig123973.4893.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig123973.4893.1 vs. uniprot
Match: F1A3X3_DICPU (PH domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A3X3_DICPU)

HSP 1 Score: 181 bits (458), Expect = 3.500e-53
Identity = 87/137 (63.50%), Postives = 109/137 (79.56%), Query Frame = 1 
Query:    7 PAEDSADPPATVADVLNPKDEPSPPPEEGGELTIETRIAQAKNCIPFLQEEDSKVLEFWQIWSESIPSKADLQPGMEIEYHISTSANMQKLTWRTSGPQNIFIQKMVDFFWNVGAPESEIDRLNDVGALINPIKIGT 417
            P+E SA P     +   PK + +P  ++    +   +I+ AK+ IPFL+EE+SKVLEFWQIWSESIP ++DLQ G  IE+H++TS +MQKLTWRT+GPQNIFIQKMVDFFWNVGAPESEIDRLNDVGA+INP+KIG+
Sbjct:   42 PSEMSASPKLNSNENSQPKSQGTPSEKQLSASSPRNKISNAKSVIPFLREEESKVLEFWQIWSESIPPQSDLQSGTSIEFHVATSIDMQKLTWRTAGPQNIFIQKMVDFFWNVGAPESEIDRLNDVGAIINPVKIGS 178
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BLAST of mRNA_M-pyrifera_M_contig123973.4893.1 vs. uniprot
Match: Y4775_DICDI (PH domain-containing protein DDB_G0274775 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Y4775_DICDI)

HSP 1 Score: 178 bits (452), Expect = 1.570e-51
Identity = 81/112 (72.32%), Postives = 99/112 (88.39%), Query Frame = 1 
Query:   82 PEEGGELTIETRIAQAKNCIPFLQEEDSKVLEFWQIWSESIPSKADLQPGMEIEYHISTSANMQKLTWRTSGPQNIFIQKMVDFFWNVGAPESEIDRLNDVGALINPIKIGT 417
            PE+    +  ++I+ AK+ IPFL+EE+SKVLEFWQIWSESIP ++DLQ G  IE+H++TS +MQKLTWRT+GPQNIFIQKMVDFFWNVGAPESEIDRLNDVGA+INP+KIG+
Sbjct:  145 PEKSSLSSPRSKISNAKSIIPFLREEESKVLEFWQIWSESIPPQSDLQSGTAIEFHVATSIDMQKLTWRTAGPQNIFIQKMVDFFWNVGAPESEIDRLNDVGAIINPVKIGS 256
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BLAST of mRNA_M-pyrifera_M_contig123973.4893.1 vs. uniprot
Match: A0A151Z6Z8_9MYCE (Pleckstrin (PH) domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z6Z8_9MYCE)

HSP 1 Score: 176 bits (447), Expect = 8.630e-51
Identity = 79/101 (78.22%), Postives = 93/101 (92.08%), Query Frame = 1 
Query:  115 RIAQAKNCIPFLQEEDSKVLEFWQIWSESIPSKADLQPGMEIEYHISTSANMQKLTWRTSGPQNIFIQKMVDFFWNVGAPESEIDRLNDVGALINPIKIGT 417
            +I Q K+ IPFL+E+DSKVLEFWQIWSESIP ++DLQ G  IE+H++TS +MQKLTWRT+GPQNIFIQKMVDFFWNVGAPESEIDRLNDVGA+INP+KIG+
Sbjct:  156 KINQGKSVIPFLKEDDSKVLEFWQIWSESIPPQSDLQSGTSIEFHVATSIDMQKLTWRTAGPQNIFIQKMVDFFWNVGAPESEIDRLNDVGAIINPVKIGS 256
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BLAST of mRNA_M-pyrifera_M_contig123973.4893.1 vs. uniprot
Match: F4PZZ1_CAVFA (Pleckstrin domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PZZ1_CAVFA)

HSP 1 Score: 180 bits (456), Expect = 2.040e-50
Identity = 84/123 (68.29%), Postives = 101/123 (82.11%), Query Frame = 1 
Query:   49 VLNPKDEPSPPPEEGGELTIETRIAQAKNCIPFLQEEDSKVLEFWQIWSESIPSKADLQPGMEIEYHISTSANMQKLTWRTSGPQNIFIQKMVDFFWNVGAPESEIDRLNDVGALINPIKIGT 417
            V  PK +   P +        +RI+ AK+ IPFL++EDSKVLEFWQIWSESIP ++DLQ G  IE+H++TS +MQKLTWRT+GPQNIFIQKMVDFFWNVGAPE+EIDRLNDVGALINP+KIG+
Sbjct:  132 VEQPKPQNGTPEKPASSTGPRSRISNAKSVIPFLRDEDSKVLEFWQIWSESIPPQSDLQSGTSIEFHVATSIDMQKLTWRTAGPQNIFIQKMVDFFWNVGAPETEIDRLNDVGALINPVKIGS 254
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BLAST of mRNA_M-pyrifera_M_contig123973.4893.1 vs. uniprot
Match: A0A8J4PK13_9MYCE (PH domain-containing protein (Fragment) n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PK13_9MYCE)

HSP 1 Score: 174 bits (442), Expect = 4.190e-50
Identity = 78/102 (76.47%), Postives = 93/102 (91.18%), Query Frame = 1 
Query:  112 TRIAQAKNCIPFLQEEDSKVLEFWQIWSESIPSKADLQPGMEIEYHISTSANMQKLTWRTSGPQNIFIQKMVDFFWNVGAPESEIDRLNDVGALINPIKIGT 417
            ++I+ AK+ IPFL+EEDSKVLEFWQIW ESIP ++DL  G  IE+H++TS +MQKLTWRT+GPQNIFIQKMVDFFWNVGAPESEIDRLNDVGA+INP+KIG+
Sbjct:  149 SKISNAKSVIPFLREEDSKVLEFWQIWLESIPPQSDLSSGTSIEFHVATSIDMQKLTWRTAGPQNIFIQKMVDFFWNVGAPESEIDRLNDVGAIINPVKIGS 250
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BLAST of mRNA_M-pyrifera_M_contig123973.4893.1 vs. uniprot
Match: UPI000644D4C7 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644D4C7)

HSP 1 Score: 171 bits (433), Expect = 9.160e-49
Identity = 77/101 (76.24%), Postives = 92/101 (91.09%), Query Frame = 1 
Query:  115 RIAQAKNCIPFLQEEDSKVLEFWQIWSESIPSKADLQPGMEIEYHISTSANMQKLTWRTSGPQNIFIQKMVDFFWNVGAPESEIDRLNDVGALINPIKIGT 417
            +IA AK+ I FL+++DSKVLEFWQIWSES P ++DLQ G  IE+H++TS +MQKLTWRT+GPQNIFIQKMVDFFWNVGAPE+EIDRLNDVGALINP+KIG+
Sbjct:  153 KIANAKSTISFLRDDDSKVLEFWQIWSESTPPQSDLQSGTTIEFHVATSIDMQKLTWRTAGPQNIFIQKMVDFFWNVGAPETEIDRLNDVGALINPLKIGS 253
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BLAST of mRNA_M-pyrifera_M_contig123973.4893.1 vs. uniprot
Match: D3BAL1_POLPP (Pleckstrin domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BAL1_POLPP)

HSP 1 Score: 172 bits (435), Expect = 1.250e-48
Identity = 77/101 (76.24%), Postives = 91/101 (90.10%), Query Frame = 1 
Query:  115 RIAQAKNCIPFLQEEDSKVLEFWQIWSESIPSKADLQPGMEIEYHISTSANMQKLTWRTSGPQNIFIQKMVDFFWNVGAPESEIDRLNDVGALINPIKIGT 417
            +I+ AK  I FL+++DSKVLEFWQIWSESIP + DLQ G  IE+H++TS +MQKLTWRT+GPQNIFIQKMVDFFWNVGAPE+EIDRLNDVGALINP+KIG+
Sbjct:  205 KISNAKTTIQFLRDDDSKVLEFWQIWSESIPPQGDLQSGTSIEFHVATSMDMQKLTWRTAGPQNIFIQKMVDFFWNVGAPETEIDRLNDVGALINPVKIGS 305
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BLAST of mRNA_M-pyrifera_M_contig123973.4893.1 vs. uniprot
Match: UPI0006448187 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006448187)

HSP 1 Score: 168 bits (425), Expect = 1.530e-47
Identity = 78/103 (75.73%), Postives = 93/103 (90.29%), Query Frame = 1 
Query:  112 TRIAQAKNCIPFLQEEDS-KVLEFWQIWSESIPSKADLQPGMEIEYHISTSANMQKLTWRTSGPQNIFIQKMVDFFWNVGAPESEIDRLNDVGALINPIKIGT 417
            ++IA AK  IPFL+++DS KVLEFWQIWSESIP + DLQ G  IE+H++TS +MQKLTWRT+GPQ+IFIQKMVDFFWNVGAPE+EIDRLNDVGALINP+KIG+
Sbjct:  155 SKIATAKATIPFLRDDDSNKVLEFWQIWSESIPPQVDLQGGNSIEFHVATSIDMQKLTWRTAGPQSIFIQKMVDFFWNVGAPETEIDRLNDVGALINPVKIGS 257
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BLAST of mRNA_M-pyrifera_M_contig123973.4893.1 vs. uniprot
Match: A0A2P6NXQ3_9EUKA (PH domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NXQ3_9EUKA)

HSP 1 Score: 151 bits (381), Expect = 4.440e-41
Identity = 68/101 (67.33%), Postives = 85/101 (84.16%), Query Frame = 1 
Query:  115 RIAQAKNCIPFLQEEDSKVLEFWQIWSESIPSKADLQPGMEIEYHISTSANMQKLTWRTSGPQNIFIQKMVDFFWNVGAPESEIDRLNDVGALINPIKIGT 417
            ++ +AK  I FL+++ SKV EFW IW ESI  K++L  G  IE++++ SA+MQKLTWRT+GPQ+IFIQKMVDFFWNVGAPE EIDRLNDVGALINP+KIG+
Sbjct:  153 KLDEAKQAISFLKDKQSKVYEFWAIWFESIAPKSELMAGGAIEFYVACSADMQKLTWRTNGPQSIFIQKMVDFFWNVGAPEDEIDRLNDVGALINPVKIGS 253
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BLAST of mRNA_M-pyrifera_M_contig123973.4893.1 vs. uniprot
Match: A0A7S4MIY1_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MIY1_9EUKA)

HSP 1 Score: 151 bits (381), Expect = 5.760e-41
Identity = 70/102 (68.63%), Postives = 86/102 (84.31%), Query Frame = 1 
Query:  115 RIAQAKNCIPFLQEEDSKVLEFWQIWSESIPSKADLQPGME-IEYHISTSANMQKLTWRTSGPQNIFIQKMVDFFWNVGAPESEIDRLNDVGALINPIKIGT 417
            ++  AK+ IPFL ++DSKVLEFW IWSESIP+  D++   E IE+ ++TSA+ +KLTWR +GPQN FIQKMVDFFWNVGAPESEID+LNDVGALINP KIG+
Sbjct:  180 KLNAAKSAIPFLSDDDSKVLEFWSIWSESIPNAEDMEGVSERIEFTLATSASREKLTWRAAGPQNAFIQKMVDFFWNVGAPESEIDKLNDVGALINPTKIGS 281
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123973.4893.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F1A3X3_DICPU3.500e-5363.50PH domain-containing protein n=1 Tax=Dictyostelium... [more]
Y4775_DICDI1.570e-5172.32PH domain-containing protein DDB_G0274775 n=1 Tax=... [more]
A0A151Z6Z8_9MYCE8.630e-5178.22Pleckstrin (PH) domain-containing protein n=1 Tax=... [more]
F4PZZ1_CAVFA2.040e-5068.29Pleckstrin domain-containing protein n=1 Tax=Caven... [more]
A0A8J4PK13_9MYCE4.190e-5076.47PH domain-containing protein (Fragment) n=1 Tax=Po... [more]
UPI000644D4C79.160e-4976.24hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
D3BAL1_POLPP1.250e-4876.24Pleckstrin domain-containing protein n=1 Tax=Polys... [more]
UPI00064481871.530e-4775.73hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A2P6NXQ3_9EUKA4.440e-4167.33PH domain-containing protein n=1 Tax=Planoprotoste... [more]
A0A7S4MIY1_9EUKA5.760e-4168.63Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig123973contigM-pyrifera_M_contig123973:15..431 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score181.4
Seed ortholog evalue2.9e-43
Seed eggNOG ortholog5786.XP_003294367.1
KEGG koko:K01192,ko:K11997,ko:K17536
KEGG Pathwayko00511,ko04013,ko04142,map00511,map04013,map04142
Hectar predicted targeting categoryother localisation
GOsGO:0001881,GO:0003674,GO:0005488,GO:0005543,GO:0005547,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005794,GO:0005802,GO:0005829,GO:0005886,GO:0006810,GO:0006996,GO:0007032,GO:0008150,GO:0008152,GO:0008289,GO:0009987,GO:0010256,GO:0012505,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016482,GO:0023051,GO:0031252,GO:0031410,GO:0031982,GO:0031984,GO:0035091,GO:0042147,GO:0043112,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044260,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0046907,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055037,GO:0065007,GO:0071704,GO:0071840,GO:0071944,GO:0097708,GO:0098791,GO:1901981
EggNOG free text desc.connector enhancer of kinase suppressor of Ras
EggNOG OGs3X89W@554915,KOG1738@1,KOG1738@2759
EC3.2.1.25
COG Functional cat.U
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko04121
Exons1
Model size417
Cds size417
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815757.76882-CDS-M-pyrifera_M_contig123973:14..4311622815757.76882-CDS-M-pyrifera_M_contig123973:14..431Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig123973 15..431 -
1692277555.386554-CDS-M-pyrifera_M_contig123973:14..4311692277555.386554-CDS-M-pyrifera_M_contig123973:14..431Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig123973 15..431 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig123973.4893.1prot_M-pyrifera_M_contig123973.4893.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig123973 15..431 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig123973.4893.1

>prot_M-pyrifera_M_contig123973.4893.1 ID=prot_M-pyrifera_M_contig123973.4893.1|Name=mRNA_M-pyrifera_M_contig123973.4893.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp
APPAEDSADPPATVADVLNPKDEPSPPPEEGGELTIETRIAQAKNCIPFL
QEEDSKVLEFWQIWSESIPSKADLQPGMEIEYHISTSANMQKLTWRTSGP
QNIFIQKMVDFFWNVGAPESEIDRLNDVGALINPIKIGT
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mRNA from alignment at M-pyrifera_M_contig123973:15..431-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig123973.4893.1 ID=mRNA_M-pyrifera_M_contig123973.4893.1|Name=mRNA_M-pyrifera_M_contig123973.4893.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=417bp|location=Sequence derived from alignment at M-pyrifera_M_contig123973:15..431- (Macrocystis pyrifera P11B4 male)
GCTCCCCCTGCGGAGGACTCGGCCGACCCGCCGGCCACTGTCGCCGATGT
GCTCAACCCCAAGGACGAACCCTCCCCCCCACCGGAGGAGGGCGGCGAGC
TCACCATCGAGACGAGGATCGCGCAGGCGAAGAACTGCATTCCCTTCTTG
CAAGAGGAGGACAGCAAGGTGTTGGAGTTCTGGCAGATTTGGTCGGAGAG
CATTCCCTCGAAGGCCGACCTTCAGCCCGGCATGGAGATCGAGTACCACA
TCTCCACCTCGGCCAACATGCAGAAGCTGACCTGGAGGACATCTGGCCCC
CAGAACATCTTCATCCAGAAGATGGTTGATTTCTTCTGGAACGTTGGTGC
GCCTGAGAGCGAGATCGACCGACTGAACGACGTTGGTGCTCTCATCAACC
CAATCAAGATTGGTACG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig123973:15..431-

>mRNA_M-pyrifera_M_contig123973.4893.1 ID=mRNA_M-pyrifera_M_contig123973.4893.1|Name=mRNA_M-pyrifera_M_contig123973.4893.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=834bp|location=Sequence derived from alignment at M-pyrifera_M_contig123973:15..431- (Macrocystis pyrifera P11B4 male)
GCTCCCCCTGCGGAGGACTCGGCCGACCCGCCGGCCACTGTCGCCGATGT
GCTCAACCCCAAGGACGAACCCTCCCCCCCACCGGAGGAGGGCGGCGAGC
TCACCATCGAGACGAGGATCGCGCAGGCGAAGAACTGCATTCCCTTCTTG
CAAGAGGAGGACAGCAAGGTGTTGGAGTTCTGGCAGATTTGGTCGGAGAG
CATTCCCTCGAAGGCCGACCTTCAGCCCGGCATGGAGATCGAGTACCACA
TCTCCACCTCGGCCAACATGCAGAAGCTGACCTGGAGGACATCTGGCCCC
CAGAACATCTTCATCCAGAAGATGGTTGATTTCTTCTGGAACGTTGGTGC
GCCTGAGAGCGAGATCGACCGACTGAACGACGTTGGTGCTCTCATCAACC
CAATCAAGATTGGTACGGCTCCCCCTGCGGAGGACTCGGCCGACCCGCCG
GCCACTGTCGCCGATGTGCTCAACCCCAAGGACGAACCCTCCCCCCCACC
GGAGGAGGGCGGCGAGCTCACCATCGAGACGAGGATCGCGCAGGCGAAGA
ACTGCATTCCCTTCTTGCAAGAGGAGGACAGCAAGGTGTTGGAGTTCTGG
CAGATTTGGTCGGAGAGCATTCCCTCGAAGGCCGACCTTCAGCCCGGCAT
GGAGATCGAGTACCACATCTCCACCTCGGCCAACATGCAGAAGCTGACCT
GGAGGACATCTGGCCCCCAGAACATCTTCATCCAGAAGATGGTTGATTTC
TTCTGGAACGTTGGTGCGCCTGAGAGCGAGATCGACCGACTGAACGACGT
TGGTGCTCTCATCAACCCAATCAAGATTGGTACG
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