mRNA_M-pyrifera_M_contig123956.4891.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123956.4891.1 vs. uniprot
Match: A0A1X2HNX7_SYNRA (Uncharacterized protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HNX7_SYNRA) HSP 1 Score: 60.5 bits (145), Expect = 1.330e-7 Identity = 54/176 (30.68%), Postives = 81/176 (46.02%), Query Frame = 1
Query: 1 YMQAVAGGNIEAHFNLALMLERGQGGEEDLEMALELFHVAASADFLEALIRLGIIYGNGDG-VPKDEARSCASLERAVALGSVQAMMMLAM-YHRQTSAGAP---------------RALQLYQRAAALGCTEAISIMADILAEGYGVPADVQKATMLYADASRRGDSWSSFRLGN 477
+M + GN++A F +ALML G G D A + + AA AL LG+ Y G G VP+D ++ E+A LG AM LAM Y Q + P +A+ +++ A LG A + + G GVP D Q A L+ A+ + D+ ++ LG+
Sbjct: 786 FMLSANRGNVDAEFQVALMLSNGTGVPCDRTEAFQWYKNAAEKRHKMALYSLGLYYLKGLGNVPRDMGKARDCFEQAAELGVTDAMAQLAMIYLSQATHPVPALDRARQQQQQQWRDKAIYWFRKGAHLGNHIAQRELGKLHDAGLGVPQDYQIAFRLFEKAAGQKDALATLLLGS 961
BLAST of mRNA_M-pyrifera_M_contig123956.4891.1 vs. uniprot
Match: UPI000B358207 (sel1 repeat family protein n=1 Tax=Thaumasiovibrio subtropicus TaxID=1891207 RepID=UPI000B358207) HSP 1 Score: 57.8 bits (138), Expect = 9.990e-7 Identity = 50/156 (32.05%), Postives = 73/156 (46.79%), Query Frame = 1
Query: 22 GNIEAHFNLALMLERGQGGEEDLEMALELFHVAASADF-LEALIRLGIIYGNGDGVPKDEARSCASLERAVALGSVQAMMMLAMYH--RQTSAGAPRALQLYQRAAALGCTEAISIMADILAEGYGVPADVQKATMLYADASRRGDSWSSFRLGNI 480
G+ EA + + M G E+DL A +LF SA+F ++A+ RLG +Y GDG+PK+ A +ERA + A +LA H + P+ L + A A +A + I A+G P D +KA L + S LGNI
Sbjct: 218 GHPEAQYLIGEMYYLALGVEQDLPKAHQLF--LQSAEFNVKAMARLGTMYIQGDGIPKEVQTGLAWVERAAEMNEPYAHYVLAALHVDGDITLDIPQYLHHLEVALAGEIPDAYCLQGMIYADGVHAPLDNEKALTLLNQGAELQSSLCQRALGNI 371
BLAST of mRNA_M-pyrifera_M_contig123956.4891.1 vs. uniprot
Match: A0A3A9IAY3_9GAMM (Uncharacterized protein n=2 Tax=Aeromonas veronii TaxID=654 RepID=A0A3A9IAY3_9GAMM) HSP 1 Score: 56.2 bits (134), Expect = 2.850e-6 Identity = 46/159 (28.93%), Postives = 80/159 (50.31%), Query Frame = 1
Query: 7 QAVAGGNIEAHFNLALMLERGQGGEEDLEMALELFHVAASADFLEALIRLGIIYGNGDGVPKDEARSCASLERAVALGS----VQAMMMLAMYHRQTSAGAPRALQLYQRAAALGCTEAISIMADILAEGYGVPADVQKATMLYADASRRGDSWSSFRL 471
QAV G+ A LA+M QG ++ + AL L+ AA+ + L +L+ LG+IY G+ VPKD+ ++ + +A L + ++LA H + + L Y +AA LG +A +A+ G G + ++A Y +++ G+ + F L
Sbjct: 111 QAVDLGDPTAKSLLAIMYLLEQGVIKNPKRALSLYKEAANENELLSLVNLGLIYEEGEIVPKDDNQAQSFFNKAKMLAKERNDANSQLILAYIHEKYG-DKEQTLSSYYKAAELGSADAEYYIANAYIFGIGTSKNEEQAIYWYNKSAKHGNKSAQFEL 268
BLAST of mRNA_M-pyrifera_M_contig123956.4891.1 vs. uniprot
Match: A0A1J4J3J0_9EUKA (Uncharacterized protein n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4J3J0_9EUKA) HSP 1 Score: 56.2 bits (134), Expect = 3.950e-6 Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = 1
Query: 1 YMQAVAGGNIEAHFNLALMLERGQGGEEDLEMALELFHVAASADFLEALIRLGIIYGNG-DGVPKDEARSCASLERAVALGSVQAMMML 264
Y QA +++A +NLA L G +D + AL + A+S D EAL LG+IY G +G+ ++ +S L+RAV LGS++AM +L
Sbjct: 1732 YNQASTQFSLKAQYNLARCLLYEIGTTQDTQKALGYLYDASSKDLPEALYLLGLIYQKGFNGIEPNDTKSLRYLQRAVRLGSIEAMTLL 1820
BLAST of mRNA_M-pyrifera_M_contig123956.4891.1 vs. uniprot
Match: A0A7S9GVY3_9BRAD (Sel1 repeat family protein n=1 Tax=Bradyrhizobium genosp. L TaxID=83637 RepID=A0A7S9GVY3_9BRAD) HSP 1 Score: 52.0 bits (123), Expect = 7.060e-5 Identity = 37/99 (37.37%), Postives = 53/99 (53.54%), Query Frame = 1
Query: 142 ALIRLGIIYGNGDGVPKDEARSCASLERAVALGSVQAMMMLAMYHRQTSAGAPRALQLYQRAAALGCTEAISIMADILAEGYGVPADVQKATMLYADAS 438
A++ LG+ YG G GV KDEA++ A ERA G+ + + LA T++ RA +L +AA EA + +LAEG G P D A L+ A+
Sbjct: 106 AMVELGVHYGTGAGVAKDEAQARALFERAAQAGNARGVSNLAALGGSTASDPVRARELLGKAAETNA-EAQYQLGMMLAEGKGGPQDDVAARALFEKAA 203
BLAST of mRNA_M-pyrifera_M_contig123956.4891.1 vs. uniprot
Match: A0A4V1T3S4_9HYPH (CASPASE_P20 domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A4V1T3S4_9HYPH) HSP 1 Score: 52.4 bits (124), Expect = 7.170e-5 Identity = 41/120 (34.17%), Postives = 60/120 (50.00%), Query Frame = 1
Query: 7 QAVAGGNIEAHFNLALMLERGQGGEEDLEMALELFHVAASADFLEALIRLGIIYGNGDGVPKDEARSCASLERAVALGSVQAMMMLAMYH---RQTSAGAPRALQLYQRAAALGCTEAIS 357
+AV G+ A + LA L GQ G D AL LF+ AA A A++R+G+IY NG G +D A++ A A+ L LA + R +A QL+++ AA G +I+
Sbjct: 443 KAVDLGHPLALYVLADKLLSGQDGPRDASRALALFYRAADAGISGAVVRIGLIYANGQGTGRDHAKAVAFYNLALKLDEPTVYPELAAAYLAGRGVLKDIDKACQLFRQGAAAGNAASIA 562 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123956.4891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123956.4891.1 >prot_M-pyrifera_M_contig123956.4891.1 ID=prot_M-pyrifera_M_contig123956.4891.1|Name=mRNA_M-pyrifera_M_contig123956.4891.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=163bp MQAVAGGNIEAHFNLALMLERGQGGEEDLEMALELFHVAASADFLEALIRback to top mRNA from alignment at M-pyrifera_M_contig123956:29..520- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123956.4891.1 ID=mRNA_M-pyrifera_M_contig123956.4891.1|Name=mRNA_M-pyrifera_M_contig123956.4891.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=492bp|location=Sequence derived from alignment at M-pyrifera_M_contig123956:29..520- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123956:29..520- >mRNA_M-pyrifera_M_contig123956.4891.1 ID=mRNA_M-pyrifera_M_contig123956.4891.1|Name=mRNA_M-pyrifera_M_contig123956.4891.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=978bp|location=Sequence derived from alignment at M-pyrifera_M_contig123956:29..520- (Macrocystis pyrifera P11B4 male)back to top |