prot_M-pyrifera_M_contig12395.4889.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig12395.4889.1
Unique Name	prot_M-pyrifera_M_contig12395.4889.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	333

Homology

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BLAST of mRNA_M-pyrifera_M_contig12395.4889.1 vs. uniprot
Match: D7FJX4_ECTSI (Methyl-accepting transducer domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJX4_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 1.700e-23
Identity = 114/293 (38.91%), Postives = 139/293 (47.44%), Query Frame = 0

Query:    1 MEAQLSATNEALEEEKEGRRGDVEGLQVALRDERNESDAEKEGLRQTLLMLQQEMGNLNASLSEANQRLEQALSQSGESEQALEDLGHEADSLRERLSAALASDARKGNXXXXXXXXXXQEGSSNVAGGDNIAAVTATTATATTTADLESARATLARDLEAAAFKLQEETAKLRRAEETCSDLERRLSLEQGLSRNKSEELHAEIKALLERVKGAEKGEEEAMKAAATEASRAAGVREDAEGAQTEVAWLRARLAESEEESERATELKGTLEVTRDALDELRVASGQAEATAE 293
            ME QLSA  EAL EEKEG R DVE                                   A+LSEANQRLEQALS+S ESE+   +LG EA  LR+RLS AL   A  GN           +G+ +   G                     A   L RDLE AA +LQ+  + L    E C++L+  L+ E+ +S    EEL    +ALL R +GAE+                            E++ LR R AE EEE  RA ELKGTLE TRDALDELRV++G+AEATAE
Sbjct:   81 MEEQLSAVTEALHEEKEGHREDVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALSEANQRLEQALSRSTESERISAELGLEAQQLRQRLSEALNEAAVAGNKQAPDNASAAGDGTGDGDTGSAXXXXXXXXXXXXXXXXXXXAIDGLKRDLEQAARRLQDNASTLEEQREQCAELQTSLAAERTIS----EELREGSQALLARAEGAERXXXXXXXXXXXXXXXXXXXXXXXXXXXAELSRLRGRAAEWEEEERRAAELKGTLESTRDALDELRVSAGEAEATAE 369

[Close]

BLAST of mRNA_M-pyrifera_M_contig12395.4889.1 vs. uniprot
Match: A0A6H5L1J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1J2_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 7.840e-11
Identity = 90/248 (36.29%), Postives = 117/248 (47.18%), Query Frame = 0

Query:   60 ASLSEANQRLEQALSQSGESEQALEDLGHEADSLRERLSAALASDARKGNXXXXXXXXXXQEGSSNVAGGDNIAAVTAT-----TATATTTADLESARAT---------LARDLEAAAFKLQEETAKLRRAEETCSDLERRLSLEQGLSRNKSEELHAEIKALLERVKGAEKGEEEAMKAAATEASRAAGVREDAEGAQTEVAWLRARLAESEEESERATELKGTLEVTRDALDELRVASGQAEATAE 293
            A+L EANQRLEQALS+S ESE+   +LG E   LRERLS AL   A  GN           + +S   GG              +ATA  +AD   AR           L RDLE A+ +LQ+  + L    E C++L+  L+ E+ +S    +EL    +ALL R +GAE+                         A  E++ LR R AE EE               RDALDELRV++G+AEATAE
Sbjct:  246 AALIEANQRLEQALSRSTESERISAELGLEVQQLRERLSEALDEAAVAGNKEAP-------DNASAAVGGXXXXXXXXXDSDTGSATAQDSADDSDARTAPEDAAAIDGLKRDLEQASRRLQDNASTLEEQRERCAELQTSLAAERTIS----QELRQGSQALLARAEGAERXXXXXXXXXXXXXXXXXXXXXXXXXADAELSRLRGRAAEWEEXXXXXXXXXXXXXXXRDALDELRVSAGEAEATAE 482

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig12395.4889.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig12395.4889.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FJX4_ECTSI	1.700e-23	38.91	Methyl-accepting transducer domain-containing prot...	[more]
A0A6H5L1J2_9PHAE	7.840e-11	36.29	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 289..333
None	No IPR available	COILS	Coil	Coil	coord: 34..103
None	No IPR available	COILS	Coil	Coil	coord: 240..267
None	No IPR available	COILS	Coil	Coil	coord: 156..193
None	No IPR available	COILS	Coil	Coil	coord: 198..218

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig12395	contig	M-pyrifera_M_contig12395:3726..7684 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig12395.4889.1	mRNA_M-pyrifera_M_contig12395.4889.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig12395 3726..7705 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig12395.4889.1 ID=prot_M-pyrifera_M_contig12395.4889.1|Name=mRNA_M-pyrifera_M_contig12395.4889.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=333bp
MEAQLSATNEALEEEKEGRRGDVEGLQVALRDERNESDAEKEGLRQTLLM
LQQEMGNLNASLSEANQRLEQALSQSGESEQALEDLGHEADSLRERLSAA
LASDARKGNGDGDGDGGGGQEGSSNVAGGDNIAAVTATTATATTTADLES
ARATLARDLEAAAFKLQEETAKLRRAEETCSDLERRLSLEQGLSRNKSEE
LHAEIKALLERVKGAEKGEEEAMKAAATEASRAAGVREDAEGAQTEVAWL
RARLAESEEESERATELKGTLEVTRDALDELRVASGQAEATAERRLKELG
VQLDEAISEKDQIEQEARSNSKEAAEQLREVQS