prot_M-pyrifera_M_contig102240.483.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig102240.483.1
Unique Nameprot_M-pyrifera_M_contig102240.483.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length182
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102240.483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 41..61
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..181
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.753
NoneNo IPR availableTMHMMTMhelixcoord: 2..24
IPR034756Type II secretion system (T2SS), protein M subtype bPFAMPF10741T2SSM_bcoord: 68..174
e-value: 2.8E-13
score: 49.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102240contigM-pyrifera_M_contig102240:95..640 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102240.483.1mRNA_M-pyrifera_M_contig102240.483.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig102240 95..640 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig102240.483.1 ID=prot_M-pyrifera_M_contig102240.483.1|Name=mRNA_M-pyrifera_M_contig102240.483.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp
QLLAVALLVTVLGSVYFLVVEPAVQSFAAARAQRNELAYGIATLQRSAKT
KETEIDLIQRQRAELPGDALYRGSNAADVASELQDRIGQAAAIAGIEVRS
STLSDGTTDDRQGALQLTLNVYGSLGSLEAFMRKIEFGYPVHFIDRLVFQ
RRSVRSGAGDDREMVDVQLDIRAYYAQDWKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034756T2SSM_b