mRNA_M-pyrifera_M_contig123568.4821.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123568.4821.1 vs. uniprot
Match: A0A7S4I9Q2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I9Q2_9EUKA) HSP 1 Score: 75.5 bits (184), Expect = 8.740e-14 Identity = 39/99 (39.39%), Postives = 53/99 (53.54%), Query Frame = 1
Query: 1 LAGLGLRLQRNAGEIKKVYTELCTQSSPFLTLIHGDFKVSNLFIDSRASARLPLRSGFPLPKTCDAEERSVWTIDWQWVGRGIAAIDVAYYLCTSTRAD 297
+ G RL N + VY + S T++HGD+K+SN+F+D R + + + SV+ IDWQWVG GI A+DVAYYL TST D
Sbjct: 303 MESFGARLYNNRKALNSVY-----KHSKLKTIVHGDYKISNIFLDRRTATQTKAKYSH--------HSDSVYVIDWQWVGLGIGAVDVAYYLATSTVLD 388
BLAST of mRNA_M-pyrifera_M_contig123568.4821.1 vs. uniprot
Match: A0A820LJV0_9BILA (Hypothetical protein n=4 Tax=Rotaria socialis TaxID=392032 RepID=A0A820LJV0_9BILA) HSP 1 Score: 62.4 bits (150), Expect = 1.310e-9 Identity = 33/98 (33.67%), Postives = 51/98 (52.04%), Query Frame = 1
Query: 10 LGLRLQRNAGEIKKVYTELCTQSSPFLTLIHGDFKVSNLFIDSRASARLPLRSGFPLPKTCDAEERSVWTIDWQWVGRGIAAIDVAYYLCTSTRADLL 303
LG L+ +I ++ L + T+IHGD+K+SN+FID ++ ER ++ IDWQW G G AA+DVAY++ TS + +
Sbjct: 42 LGFLLESRLNDIMLLFNNLQPR-----TIIHGDYKISNIFIDHNST------------------ERQIYAIDWQWCGIGHAAMDVAYFIATSVHENTI 116
BLAST of mRNA_M-pyrifera_M_contig123568.4821.1 vs. uniprot
Match: A0A819PQX3_9BILA (Hypothetical protein n=3 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A819PQX3_9BILA) HSP 1 Score: 58.2 bits (139), Expect = 4.130e-8 Identity = 30/71 (42.25%), Postives = 39/71 (54.93%), Query Frame = 1
Query: 91 TLIHGDFKVSNLFIDSRASARLPLRSGFPLPKTCDAEERSVWTIDWQWVGRGIAAIDVAYYLCTSTRADLL 303
TLIHGDFKV+N+FID+ E V+ IDWQW G G AIDVAY++ TS +++
Sbjct: 47 TLIHGDFKVTNIFIDNNQI------------------EGQVYAIDWQWFGVGNIAIDVAYFIATSIHENVI 99
BLAST of mRNA_M-pyrifera_M_contig123568.4821.1 vs. uniprot
Match: A0A819QRW1_9BILA (Hypothetical protein n=3 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A819QRW1_9BILA) HSP 1 Score: 56.6 bits (135), Expect = 1.830e-7 Identity = 29/69 (42.03%), Postives = 36/69 (52.17%), Query Frame = 1
Query: 91 TLIHGDFKVSNLFIDSRASARLPLRSGFPLPKTCDAEERSVWTIDWQWVGRGIAAIDVAYYLCTSTRAD 297
TLIHGDFKV+N+ ID E V+ +DWQW G G AIDVAY++ TS +D
Sbjct: 79 TLIHGDFKVTNILIDDNEI------------------ESQVYAVDWQWFGVGNIAIDVAYFIATSVLSD 129
BLAST of mRNA_M-pyrifera_M_contig123568.4821.1 vs. uniprot
Match: A0A5B8MHF0_9CHLO (Inositol monophosphatase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MHF0_9CHLO) HSP 1 Score: 56.6 bits (135), Expect = 3.970e-7 Identity = 28/94 (29.79%), Postives = 43/94 (45.74%), Query Frame = 1
Query: 22 LQRNAGEIKKVYTELCTQSSPFLTLIHGDFKVSNLFIDSRASARLPLRSGFPLPKTCDAEERSVWTIDWQWVGRGIAAIDVAYYLCTSTRADLL 303
L+ +A + ++ C P TLIHGDFK +N+F+ L + +D+QWVG G+ A+D+ Y+L TS L
Sbjct: 271 LRESASSLSRMLARACLPGHPSRTLIHGDFKAANVFVSGNEGGGSSLATA----------------VDYQWVGFGLGAVDLVYFLTTSLEESAL 348
BLAST of mRNA_M-pyrifera_M_contig123568.4821.1 vs. uniprot
Match: A0A2P6NMM1_9EUKA (Hormonally up-regulated neu tumor-associated kinase-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NMM1_9EUKA) HSP 1 Score: 56.6 bits (135), Expect = 4.000e-7 Identity = 33/101 (32.67%), Postives = 46/101 (45.54%), Query Frame = 1
Query: 1 LAGLGLRLQRNAGEIKKVYTELCTQSSPFLTLIHGDFKVSNLFIDSRASARLPLRSGFPLPKTCDAEERSVWTIDWQWVGRGIAAIDVAYYLCTSTRADLL 303
L LG RL + K + + + TL+HGD+K+SNLF+ E V+ IDWQW G G A+DV+Y++ TS LL
Sbjct: 763 LETLGERLNERLSSLSKQFDRMEPK-----TLVHGDYKISNLFVPP---------------------EGGVYAIDWQWFGMGPGALDVSYFIATSLSPSLL 837
BLAST of mRNA_M-pyrifera_M_contig123568.4821.1 vs. uniprot
Match: A0A2P6N9S2_9EUKA (DNA repair protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N9S2_9EUKA) HSP 1 Score: 56.6 bits (135), Expect = 4.070e-7 Identity = 33/101 (32.67%), Postives = 46/101 (45.54%), Query Frame = 1
Query: 1 LAGLGLRLQRNAGEIKKVYTELCTQSSPFLTLIHGDFKVSNLFIDSRASARLPLRSGFPLPKTCDAEERSVWTIDWQWVGRGIAAIDVAYYLCTSTRADLL 303
L LG RL + K + + + TL+HGD+K+SNLF+ E V+ IDWQW G G A+DV+Y++ TS LL
Sbjct: 1174 LETLGERLNERLSSLSKQFDRMEPK-----TLVHGDYKISNLFVPP---------------------EGGVYAIDWQWFGMGPGALDVSYFIATSLSPSLL 1248
BLAST of mRNA_M-pyrifera_M_contig123568.4821.1 vs. uniprot
Match: A0A816XJP9_9BILA (Hypothetical protein n=3 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816XJP9_9BILA) HSP 1 Score: 54.7 bits (130), Expect = 9.990e-7 Identity = 28/71 (39.44%), Postives = 35/71 (49.30%), Query Frame = 1
Query: 91 TLIHGDFKVSNLFIDSRASARLPLRSGFPLPKTCDAEERSVWTIDWQWVGRGIAAIDVAYYLCTSTRADLL 303
TLIHGDFKV+N+ ID E V+ +DWQW G G AIDVAY++ TS +
Sbjct: 66 TLIHGDFKVTNILIDDNEI------------------ESQVYAVDWQWFGVGNIAIDVAYFIATSVNESAI 118
BLAST of mRNA_M-pyrifera_M_contig123568.4821.1 vs. uniprot
Match: A0A815U7X1_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815U7X1_9BILA) HSP 1 Score: 53.5 bits (127), Expect = 4.500e-6 Identity = 33/92 (35.87%), Postives = 48/92 (52.17%), Query Frame = 1
Query: 10 LGLRLQRNAGEIKKVYTELCTQSSPFLTLIHGDFKVSNLFIDSRASARLPLRSGFPLPKTCDAEERSVWTIDWQWVGRGIAAIDVAYYLCTS 285
LG+RL+ +I + + L + TLIHGDFK++N+FI+ F T V+ IDWQW G G A+DVA+++ TS
Sbjct: 229 LGVRLEHRLDDIALIMSLLEPR-----TLIHGDFKITNIFINHN-------NHDFYAESTTTEH---VYAIDWQWFGIGNVALDVAHFIATS 305
BLAST of mRNA_M-pyrifera_M_contig123568.4821.1 vs. uniprot
Match: A0A7S2SKM8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKM8_9STRA) HSP 1 Score: 52.8 bits (125), Expect = 8.330e-6 Identity = 26/71 (36.62%), Postives = 38/71 (53.52%), Query Frame = 1
Query: 88 LTLIHGDFKVSNLFIDSRASARLPLRSGFPLPKTCDAEERSVWTIDWQWVGRGIAAIDVAYYLCTSTRADL 300
LTLIHGDFK++N++ + + P P + IDWQW G G+ A D+A+ LCTS + +
Sbjct: 189 LTLIHGDFKLTNIYFLEAVESLEVTDAVVPCPPAGTGSWLRL--IDWQWAGMGVGAADIAHTLCTSLASPI 257 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123568.4821.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123568.4821.1 >prot_M-pyrifera_M_contig123568.4821.1 ID=prot_M-pyrifera_M_contig123568.4821.1|Name=mRNA_M-pyrifera_M_contig123568.4821.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=102bp LAGLGLRLQRNAGEIKKVYTELCTQSSPFLTLIHGDFKVSNLFIDSRASAback to top mRNA from alignment at M-pyrifera_M_contig123568:152..457- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123568.4821.1 ID=mRNA_M-pyrifera_M_contig123568.4821.1|Name=mRNA_M-pyrifera_M_contig123568.4821.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=306bp|location=Sequence derived from alignment at M-pyrifera_M_contig123568:152..457- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123568:152..457- >mRNA_M-pyrifera_M_contig123568.4821.1 ID=mRNA_M-pyrifera_M_contig123568.4821.1|Name=mRNA_M-pyrifera_M_contig123568.4821.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig123568:152..457- (Macrocystis pyrifera P11B4 male)back to top |