mRNA_M-pyrifera_M_contig12355.4816.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12355.4816.1
Unique NamemRNA_M-pyrifera_M_contig12355.4816.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig12355.4816.1 vs. uniprot
Match: D7FPY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPY2_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 9.460e-38
Identity = 65/67 (97.01%), Postives = 67/67 (100.00%), Query Frame = 1 
Query:    1 QDPTSDNLGTTIWDASVILVRYMERNPQLYSRRKLEGKRVLELGAGCGLAGMYFALQGAHVTFTDLV 201
            QDPTSDNLGTTIWDASVILVRYMERNPQLYSRR+LEGKRVLELGAGCGLAGMYFALQGAHVTFTDL+
Sbjct:   28 QDPTSDNLGTTIWDASVILVRYMERNPQLYSRRRLEGKRVLELGAGCGLAGMYFALQGAHVTFTDLI 94
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BLAST of mRNA_M-pyrifera_M_contig12355.4816.1 vs. uniprot
Match: A0A1D2A3F6_AUXPR (Uncharacterized protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A3F6_AUXPR)

HSP 1 Score: 88.6 bits (218), Expect = 5.400e-21
Identity = 41/68 (60.29%), Postives = 54/68 (79.41%), Query Frame = 1 
Query:    1 QDPTSDNLGTTIWDASVILVRYMERNPQL--YSRRKLEGKRVLELGAGCGLAGMYFALQGAHVTFTDL 198
            QDP S+NLGTT+WDAS++L +++E+N +   +S  +++GKR LELGAG GLAG   AL GAHVTFTDL
Sbjct:   28 QDPNSENLGTTVWDASIVLAKFLEKNARKGEWSTVRVKGKRCLELGAGMGLAGAAMALMGAHVTFTDL 95
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BLAST of mRNA_M-pyrifera_M_contig12355.4816.1 vs. uniprot
Match: A0A835YRK7_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRK7_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.020e-20
Identity = 42/66 (63.64%), Postives = 52/66 (78.79%), Query Frame = 1 
Query:    1 QDPTSDNLGTTIWDASVILVRYMERNPQLYSRRKLEGKRVLELGAGCGLAGMYFALQGAHVTFTDL 198
            Q P S NLGT++WDASVILV Y+  N + +++R ++GKRVLELGAGCGLAG+Y A  GA VT TDL
Sbjct:   26 QQPGSGNLGTSVWDASVILVHYLNDNSKQFNQRTMDGKRVLELGAGCGLAGIYCATLGADVTLTDL 91
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BLAST of mRNA_M-pyrifera_M_contig12355.4816.1 vs. uniprot
Match: A0A1D1ZWE0_AUXPR (Uncharacterized protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZWE0_AUXPR)

HSP 1 Score: 88.6 bits (218), Expect = 7.720e-20
Identity = 41/68 (60.29%), Postives = 54/68 (79.41%), Query Frame = 1 
Query:    1 QDPTSDNLGTTIWDASVILVRYMERNPQL--YSRRKLEGKRVLELGAGCGLAGMYFALQGAHVTFTDL 198
            QDP S+NLGTT+WDAS++L +++E+N +   +S  +++GKR LELGAG GLAG   AL GAHVTFTDL
Sbjct:   28 QDPNSENLGTTVWDASIVLAKFLEKNARKGEWSTVRVKGKRCLELGAGMGLAGAAMALMGAHVTFTDL 95
[Close]
BLAST of mRNA_M-pyrifera_M_contig12355.4816.1 vs. uniprot
Match: A0A2P6TLS3_CHLSO (Uncharacterized protein n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TLS3_CHLSO)

HSP 1 Score: 89.0 bits (219), Expect = 2.970e-19
Identity = 42/68 (61.76%), Postives = 52/68 (76.47%), Query Frame = 1 
Query:    1 QDPTSDNLGTTIWDASVILVRYMERNPQL--YSRRKLEGKRVLELGAGCGLAGMYFALQGAHVTFTDL 198
            QDP S NLGTT+WDAS++L +Y+E+N +   +SR K+ GKR LELGAG GLAGM  AL GA V FTD+
Sbjct:   26 QDPNSSNLGTTVWDASIVLAKYIEKNSRRGDFSRPKVRGKRALELGAGMGLAGMALALLGAEVVFTDI 93
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BLAST of mRNA_M-pyrifera_M_contig12355.4816.1 vs. uniprot
Match: A0A2P6V8H3_9CHLO (Lysine methyltransferase METTL21D isoform X1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V8H3_9CHLO)

HSP 1 Score: 87.4 bits (215), Expect = 8.710e-19
Identity = 40/68 (58.82%), Postives = 53/68 (77.94%), Query Frame = 1 
Query:    1 QDPTSDNLGTTIWDASVILVRYMERNPQL--YSRRKLEGKRVLELGAGCGLAGMYFALQGAHVTFTDL 198
            QDP S+NLGTT+WDAS++L +Y+E+N +   +SR+++ GKR LELGAG GLAGM  AL G  V FTD+
Sbjct:   26 QDPNSNNLGTTVWDASIVLAKYIEKNSRRGDFSRQRVRGKRALELGAGMGLAGMALALLGCDVAFTDI 93
[Close]
BLAST of mRNA_M-pyrifera_M_contig12355.4816.1 vs. uniprot
Match: A0A1Y1HYS1_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HYS1_KLENI)

HSP 1 Score: 87.0 bits (214), Expect = 1.240e-18
Identity = 41/67 (61.19%), Postives = 49/67 (73.13%), Query Frame = 1 
Query:    1 QDPTSDNLGTTIWDASVILVRYMERNPQL--YSRRKLEGKRVLELGAGCGLAGMYFALQGAHVTFTD 195
            QDP S +LG T+WDAS++L +Y+ERN     +SR+KL GKR LELGAGCGLAGM   L G HV  TD
Sbjct:   26 QDPNSQHLGKTVWDASMVLAKYLERNENKGEFSRKKLAGKRALELGAGCGLAGMGLCLLGCHVVTTD 92
[Close]
BLAST of mRNA_M-pyrifera_M_contig12355.4816.1 vs. uniprot
Match: A0A6P5EYF7_ANACO (protein N-lysine methyltransferase METTL21A-like isoform X3 n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5EYF7_ANACO)

HSP 1 Score: 82.4 bits (202), Expect = 3.090e-18
Identity = 40/69 (57.97%), Postives = 52/69 (75.36%), Query Frame = 1 
Query:    1 QDPTSDNLGTTIWDASVILVRYMERNPQL--YSRRKLEGKRVLELGAGCGLAGMYFALQGAHVTFTDLV 201
            QDP S +LGTT+WDAS++ V+Y+E+N +   +S  KL+GKRV+ELGAGCGLAG+  AL G  V  TD V
Sbjct:   27 QDPNSKHLGTTVWDASMVFVKYLEKNCRKGRFSPSKLKGKRVIELGAGCGLAGLGMALLGCDVITTDQV 95
[Close]
BLAST of mRNA_M-pyrifera_M_contig12355.4816.1 vs. uniprot
Match: E1ZD88_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZD88_CHLVA)

HSP 1 Score: 85.9 bits (211), Expect = 3.180e-18
Identity = 40/68 (58.82%), Postives = 52/68 (76.47%), Query Frame = 1 
Query:    1 QDPTSDNLGTTIWDASVILVRYMERNPQL--YSRRKLEGKRVLELGAGCGLAGMYFALQGAHVTFTDL 198
            QDP S NLGTT+WDAS++L +Y+E+N +   +SR K+ G++ LELGAG GLAGM  AL GA V FTD+
Sbjct:   26 QDPNSSNLGTTVWDASIVLAKYIEKNSRRGDFSRPKVRGRQALELGAGMGLAGMALALLGADVAFTDI 93
[Close]
BLAST of mRNA_M-pyrifera_M_contig12355.4816.1 vs. uniprot
Match: A0A6P5EXQ5_ANACO (protein N-lysine methyltransferase METTL21A-like isoform X2 n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5EXQ5_ANACO)

HSP 1 Score: 82.4 bits (202), Expect = 3.810e-18
Identity = 40/69 (57.97%), Postives = 52/69 (75.36%), Query Frame = 1 
Query:    1 QDPTSDNLGTTIWDASVILVRYMERNPQL--YSRRKLEGKRVLELGAGCGLAGMYFALQGAHVTFTDLV 201
            QDP S +LGTT+WDAS++ V+Y+E+N +   +S  KL+GKRV+ELGAGCGLAG+  AL G  V  TD V
Sbjct:   27 QDPNSKHLGTTVWDASMVFVKYLEKNCRKGRFSPSKLKGKRVIELGAGCGLAGLGMALLGCDVITTDQV 95
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12355.4816.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPY2_ECTSI9.460e-3897.01Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1D2A3F6_AUXPR5.400e-2160.29Uncharacterized protein n=1 Tax=Auxenochlorella pr... [more]
A0A835YRK7_9STRA1.020e-2063.64Putative methyltransferase-domain-containing prote... [more]
A0A1D1ZWE0_AUXPR7.720e-2060.29Uncharacterized protein n=1 Tax=Auxenochlorella pr... [more]
A0A2P6TLS3_CHLSO2.970e-1961.76Uncharacterized protein n=1 Tax=Chlorella sorokini... [more]
A0A2P6V8H3_9CHLO8.710e-1958.82Lysine methyltransferase METTL21D isoform X1 n=1 T... [more]
A0A1Y1HYS1_KLENI1.240e-1861.19Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A6P5EYF7_ANACO3.090e-1857.97protein N-lysine methyltransferase METTL21A-like i... [more]
E1ZD88_CHLVA3.180e-1858.82Uncharacterized protein n=1 Tax=Chlorella variabil... [more]
A0A6P5EXQ5_ANACO3.810e-1857.97protein N-lysine methyltransferase METTL21A-like i... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12355contigM-pyrifera_M_contig12355:3840..4058 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score141.4
Seed ortholog evalue1.7e-31
Seed eggNOG ortholog2880.D7FPY2
Preferred nameVCPKMT
KEGG koko:K21806
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018193,GO:0018205,GO:0019538,GO:0019899,GO:0032259,GO:0032780,GO:0032991,GO:0036211,GO:0043086,GO:0043170,GO:0043412,GO:0043414,GO:0043462,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051117,GO:0051336,GO:0051346,GO:0065007,GO:0065009,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.lysine N-methyltransferase activity
EggNOG OGsKOG2793@1,KOG2793@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03019
Exons1
Model size219
Cds size219
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815753.906234-CDS-M-pyrifera_M_contig12355:3839..40581622815753.906234-CDS-M-pyrifera_M_contig12355:3839..4058Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12355 3840..4058 +
1692277553.5327957-CDS-M-pyrifera_M_contig12355:3839..40581692277553.5327957-CDS-M-pyrifera_M_contig12355:3839..4058Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12355 3840..4058 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12355.4816.1prot_M-pyrifera_M_contig12355.4816.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12355 3840..4058 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12355.4816.1

>prot_M-pyrifera_M_contig12355.4816.1 ID=prot_M-pyrifera_M_contig12355.4816.1|Name=mRNA_M-pyrifera_M_contig12355.4816.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=73bp
QDPTSDNLGTTIWDASVILVRYMERNPQLYSRRKLEGKRVLELGAGCGLA
GMYFALQGAHVTFTDLVRYGLR*
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mRNA from alignment at M-pyrifera_M_contig12355:3840..4058+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12355.4816.1 ID=mRNA_M-pyrifera_M_contig12355.4816.1|Name=mRNA_M-pyrifera_M_contig12355.4816.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=219bp|location=Sequence derived from alignment at M-pyrifera_M_contig12355:3840..4058+ (Macrocystis pyrifera P11B4 male)
CAGGACCCAACGTCGGACAATCTCGGCACGACCATCTGGGACGCGAGCGT
GATCCTTGTGCGGTACATGGAACGCAACCCGCAGCTCTACTCTAGGAGGA
AGCTGGAGGGCAAGCGGGTGCTCGAGCTCGGCGCCGGCTGCGGACTGGCG
GGGATGTACTTCGCCTTGCAGGGCGCCCATGTGACTTTCACAGACCTGGT
GAGATATGGTTTGAGGTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig12355:3840..4058+

>mRNA_M-pyrifera_M_contig12355.4816.1 ID=mRNA_M-pyrifera_M_contig12355.4816.1|Name=mRNA_M-pyrifera_M_contig12355.4816.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=438bp|location=Sequence derived from alignment at M-pyrifera_M_contig12355:3840..4058+ (Macrocystis pyrifera P11B4 male)
CAGGACCCAACGTCGGACAATCTCGGCACGACCATCTGGGACGCGAGCGT
GATCCTTGTGCGGTACATGGAACGCAACCCGCAGCTCTACTCTAGGAGGA
AGCTGGAGGGCAAGCGGGTGCTCGAGCTCGGCGCCGGCTGCGGACTGGCG
GGGATGTACTTCGCCTTGCAGGGCGCCCATGTGACTTTCACAGACCTGGT
GAGATATGGTTTGAGGTAGCAGGACCCAACGTCGGACAATCTCGGCACGA
CCATCTGGGACGCGAGCGTGATCCTTGTGCGGTACATGGAACGCAACCCG
CAGCTCTACTCTAGGAGGAAGCTGGAGGGCAAGCGGGTGCTCGAGCTCGG
CGCCGGCTGCGGACTGGCGGGGATGTACTTCGCCTTGCAGGGCGCCCATG
TGACTTTCACAGACCTGGTGAGATATGGTTTGAGGTAG
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