prot_M-pyrifera_M_contig12348.4805.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12348.4805.1
Unique Nameprot_M-pyrifera_M_contig12348.4805.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length138
Homology
BLAST of mRNA_M-pyrifera_M_contig12348.4805.1 vs. uniprot
Match: A0A6H5JEA8_9PHAE (PWWP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA8_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 5.460e-60
Identity = 98/122 (80.33%), Postives = 109/122 (89.34%), Query Frame = 0
Query:    5 NQALHVRCSSTSEIVWARLHGFPWWPALVVKPDGAGFQRSLEEAGDRLVVFMNENEQFRVNHRFCKPFVGTSQDD-IMRRVSRGNKRMAKAIKMGMKGLRVAHELLGTEGDPNAPLNRPSFD 125
            NQALHVRCSSTSEIVWARLHGFPWWPALVVKP+G GFQRSL EAGDRLVVFMNE + FRVNHRFCKP+VGT++ D +MRR SR N+RMA+AIKM  KGLRVAHE  G++GDPNAP NRP+FD
Sbjct:  798 NQALHVRCSSTSEIVWARLHGFPWWPALVVKPEGVGFQRSLLEAGDRLVVFMNEQQHFRVNHRFCKPYVGTTKHDGVMRRASRNNRRMARAIKMATKGLRVAHERFGSDGDPNAPHNRPNFD 919          
BLAST of mRNA_M-pyrifera_M_contig12348.4805.1 vs. uniprot
Match: D8LRK0_ECTSI (Nucleosome/chromatin assembly factor group n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRK0_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 1.750e-24
Identity = 60/125 (48.00%), Postives = 64/125 (51.20%), Query Frame = 0
Query:    1 DLATNQALHVRCSSTSEIVWARLHGFPWWPALVVKPDGAGFQRSLEEAGDRLVVFMNENEQFRVNHRFCKPFVGTSQDDIMRRVSRGNKRMAKAIKMGMKGLRVAHELLGTEGDPNAPLNRPSFD 125
            DLATNQAL VRCSSTSEIVWARLHGFPWWPALVVKP+G GFQ                                                      M  KGLRVAHE  G++GDPNAP NRP+FD
Sbjct: 1507 DLATNQALRVRCSSTSEIVWARLHGFPWWPALVVKPEGVGFQ------------------------------------------------------MATKGLRVAHERFGSDGDPNAPHNRPNFD 1577          
BLAST of mRNA_M-pyrifera_M_contig12348.4805.1 vs. uniprot
Match: A0A7S2BI97_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BI97_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 2.330e-11
Identity = 35/107 (32.71%), Postives = 59/107 (55.14%), Query Frame = 0
Query:    3 ATNQALHVRCSSTSEIVWARLHGFPWWPALVVKPDGAGFQRSLEEAGDRLVVFMNENEQFRVNHRFCKPFVGTSQDDIMRRVSRGNKRMAKAIKMGMKGLRV--AHE 107
            A + ++ V    TSE+VWAR+ G+PWWP+ V +P    F +++ E  + LVVF+ E  Q+ +      PF G  QD  M +  R    + +++++ +   R+  AHE
Sbjct:   29 AIDPSVRVSSEPTSEMVWARVKGYPWWPSRVHRPRDPKFSQAMSERNEILVVFVGEAAQYHLPLEDTAPFTGDEQDSHMPKKDR---HIQRSLRLAIHTTRMIQAHE 132          
BLAST of mRNA_M-pyrifera_M_contig12348.4805.1 vs. uniprot
Match: A0A7S3JYV4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYV4_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.650e-11
Identity = 40/125 (32.00%), Postives = 60/125 (48.00%), Query Frame = 0
Query:   19 VWARLHGFPWWPALVVKPDGAGFQRSLEEAGDRLVVFMNENEQFRVNHRFCKPFVGTSQDDIMRRVSRGNKRMAKAIKMGMKGLRVAHELL--------------------GTEGDPNAPLNRPS 123
            VWAR+ G+PWWPA    P    F ++LE    +L+VF+NE+  + ++    +PF G   D           RM K+IK   KGL++A  ++                    GTE + N PLN+P+
Sbjct: 1098 VWARIRGYPWWPAREYIPKSPHFAQALERRNHKLLVFVNESVMYLIDSNSVEPFTGLPDDP----------RMPKSIKQCAKGLQLALTIVKAVQQKEDLPTANGESSTPQGTEQNANTPLNQPT 1212          
BLAST of mRNA_M-pyrifera_M_contig12348.4805.1 vs. uniprot
Match: A0A7S3ZNS7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNS7_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 2.330e-8
Identity = 29/101 (28.71%), Postives = 54/101 (53.47%), Query Frame = 0
Query:    7 ALHVRCSSTSEIVWARLHGFPWWPALVVKPDGAGFQRSLEEAGDRLVVFMNENEQFRVNHRFCKPFVGTSQDDIMRRVSRGNKRMAKAIKMGMKGLRVAHE 107
            A+++    T E+VWAR+ G+PWWPA   +P    F+ +L+  G  L+VF+ E+ Q+ +       F G   D  + +  +   ++A+AI+     + V ++
Sbjct:  746 AVYIPSKPTGELVWARIRGYPWWPARRHEPTRQDFKEALQARGRSLIVFVGESVQYFMPSSGLAEFSGVEGDVHLPKPGKATPQLAEAIRHARTSVGVYYD 846          
BLAST of mRNA_M-pyrifera_M_contig12348.4805.1 vs. uniprot
Match: A0A8J2X491_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X491_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 2.420e-8
Identity = 29/101 (28.71%), Postives = 54/101 (53.47%), Query Frame = 0
Query:    7 ALHVRCSSTSEIVWARLHGFPWWPALVVKPDGAGFQRSLEEAGDRLVVFMNENEQFRVNHRFCKPFVGTSQDDIMRRVSRGNKRMAKAIKMGMKGLRVAHE 107
            A+++    T E+VWAR+ G+PWWPA   +P    F+ +L+  G  L+VF+ E+ Q+ +       F G   D  + +  +   ++A+AI+     + V ++
Sbjct: 1284 AVYIPSKPTGELVWARIRGYPWWPARRHEPTRQDFKEALQARGRSLIVFVGESVQYFMPSSGLAEFSGVEGDVHLPKPGKATPQLAEAIRHARTSVGVYYD 1384          
BLAST of mRNA_M-pyrifera_M_contig12348.4805.1 vs. uniprot
Match: A0A7S2CLH6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CLH6_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 2.160e-7
Identity = 30/102 (29.41%), Postives = 51/102 (50.00%), Query Frame = 0
Query:    7 ALHVRCSSTSEIVWARLHGFPWWPALVVKPDGAGFQRSLEEAGDRLVVFMNENEQFRVNHRFCKPFVGTSQDDIMRRVSRG---NKRMAKAIKMGMKGLRVA 105
            A+ +    T  ++WAR+ GFPWWPA +       F+R L+E  + L+VF+ E  ++ +      PF+G  +D  M +  +     K +  AI   +  +R A
Sbjct:  146 AVMIPSIGTQTMLWARVSGFPWWPARLHTALNPEFERVLKERSEVLIVFVGEAHKYHLPETSVAPFLGNDEDPHMPKQGKSPVTKKELQMAINTALSIIRTA 247          
BLAST of mRNA_M-pyrifera_M_contig12348.4805.1 vs. uniprot
Match: A0A0V0R2M5_PSEPJ (PWWP domain-containing protein n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0R2M5_PSEPJ)

HSP 1 Score: 51.2 bits (121), Expect = 9.770e-5
Identity = 26/84 (30.95%), Postives = 47/84 (55.95%), Query Frame = 0
Query:   17 EIVWARLHGFPWWPALVVKPDGAGFQRSLEEAGDRLVVFMNENEQFRVNHRFCKPFVGTSQDDIMRRVSRGNKRMAKAIKMGMK 100
            ++VWA++ G+PWWPA+V +   +  Q+++      LV F+N+N    +   F   F+   +       S+ NK++ +AIKMG +
Sbjct:   11 QVVWAKVKGYPWWPAVVAQISSS--QQNI------LVNFLNDNSHCNLQKNFILDFMDNLEQFQKHVQSQKNKQLVEAIKMGKR 86          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12348.4805.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JEA8_9PHAE5.460e-6080.33PWWP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LRK0_ECTSI1.750e-2448.00Nucleosome/chromatin assembly factor group n=1 Tax... [more]
A0A7S2BI97_9STRA2.330e-1132.71Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3JYV4_9STRA2.650e-1132.00Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3ZNS7_9STRA2.330e-828.71Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8J2X491_9STRA2.420e-828.71Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2CLH6_9STRA2.160e-729.41Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A0V0R2M5_PSEPJ9.770e-530.95PWWP domain-containing protein n=1 Tax=Pseudocohni... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000313PWWP domainPFAMPF00855PWWPcoord: 16..97
e-value: 2.3E-12
score: 47.2
IPR000313PWWP domainPROSITEPS50812PWWPcoord: 15..75
score: 11.589
NoneNo IPR availableGENE3D2.30.30.140coord: 12..107
e-value: 3.3E-13
score: 51.7
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 13..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12348contigM-pyrifera_M_contig12348:5930..8376 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12348.4805.1mRNA_M-pyrifera_M_contig12348.4805.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12348 5930..8376 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12348.4805.1 ID=prot_M-pyrifera_M_contig12348.4805.1|Name=mRNA_M-pyrifera_M_contig12348.4805.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=138bp
DLATNQALHVRCSSTSEIVWARLHGFPWWPALVVKPDGAGFQRSLEEAGD
RLVVFMNENEQFRVNHRFCKPFVGTSQDDIMRRVSRGNKRMAKAIKMGMK
GLRVAHELLGTEGDPNAPLNRPSFDAPEAPEEEAALPA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000313PWWP_dom