mRNA_M-pyrifera_M_contig12346.4804.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12346.4804.1 vs. uniprot
Match: D7G7R8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7R8_ECTSI) HSP 1 Score: 281 bits (718), Expect = 2.570e-90 Identity = 144/153 (94.12%), Postives = 147/153 (96.08%), Query Frame = 1
Query: 1 MLVQVNRRFLIGQSVDSEITEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRYGQEFRQLLARDPKDKNKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNLFALEQFQTPDLRK 459
+L +VNRRFLIGQSVDSE TEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRYGQEFRQLLAR P DK KYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHN+FALEQFQTP LRK
Sbjct: 286 VLTEVNRRFLIGQSVDSETTEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRYGQEFRQLLARPPDDKGKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNMFALEQFQTPALRK 438
BLAST of mRNA_M-pyrifera_M_contig12346.4804.1 vs. uniprot
Match: A0A6H5J9P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9P9_9PHAE) HSP 1 Score: 209 bits (532), Expect = 5.750e-62 Identity = 115/156 (73.72%), Postives = 123/156 (78.85%), Query Frame = 1
Query: 1 MLVQVNRRFLIGQSVDSEITEGIKAILMSRGSIEQLHQVQ---SQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRYGQEFRQLLARDPKDKNKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNLFALEQFQTPDLRK 459
+L +VNRRFLIGQSVDSE TEGIKAILMSRGSIEQLHQ + S W T + + L + + YGQEFRQLLAR P DK KYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHN+FALEQFQTP LRK
Sbjct: 349 VLTEVNRRFLIGQSVDSETTEGIKAILMSRGSIEQLHQARCNHSGWGRTLLPSRPRSTSMAPSLLLSSSSIQGTYGQEFRQLLARPPDDKGKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNMFALEQFQTPALRK 504
BLAST of mRNA_M-pyrifera_M_contig12346.4804.1 vs. uniprot
Match: A0A7S0FKN8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FKN8_9STRA) HSP 1 Score: 145 bits (366), Expect = 3.650e-41 Identity = 81/153 (52.94%), Postives = 106/153 (69.28%), Query Frame = 1
Query: 1 MLVQVNRRFLIGQSVDSEITEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRYGQEFRQLLARDPKDKNKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNLFALEQFQTPDLRK 459
+LV+VN RFL+G +VDSEITE IK IL+++ SI+ +H +QSQW G TF++KAEVDFDGTFLAAKL RY EF + K+ KD LLS+Y EDVMR+AERE++ E +IRK+YP A YIELEP S + FA++ L++
Sbjct: 45 ILVRVNHRFLLGHAVDSEITEAIKKILLNQKSIDGVHSIQSQWTGPETFSYKAEVDFDGTFLAAKLM--PRYQTEFLKA------QKSLDKDLRVLLSWYAEDVMRSAEREIKYIEAQIRKEYPGAEYIELEPMSKDSDRFAIDDGMEAQLKR 189
BLAST of mRNA_M-pyrifera_M_contig12346.4804.1 vs. uniprot
Match: A0A7S1DBT2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBT2_CYCTE) HSP 1 Score: 147 bits (370), Expect = 1.440e-40 Identity = 85/153 (55.56%), Postives = 105/153 (68.63%), Query Frame = 1
Query: 1 MLVQVNRRFLIGQSVDSEITEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRYGQEFRQLLARDPKDKNKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNLFALEQFQTPDLRK 459
+LV+VN RFL+GQ+VD +ITEGI+ IL+ R SI+ + VQSQW G TF+FKAEVDFDGTFLAAKL RY EF ++ D D + LLS+Y EDVMR EREV+E E EIRK+YP A YIELEP S + FA++ T LR+
Sbjct: 133 VLVRVNHRFLLGQAVDKDITEGIEKILLLRRSIDNVQSVQSQWTGPETFSFKAEVDFDGTFLAAKLM--PRYQNEFLEV--GDSLDS----ELRVLLSWYAEDVMRTVEREVKEIEAEIRKRYPGAEYIELEPMSKDSDRFAIDDGMTGQLRR 277
BLAST of mRNA_M-pyrifera_M_contig12346.4804.1 vs. uniprot
Match: A0A7S1FQ98_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQ98_9STRA) HSP 1 Score: 149 bits (376), Expect = 8.360e-40 Identity = 83/152 (54.61%), Postives = 108/152 (71.05%), Query Frame = 1
Query: 4 LVQVNRRFLIGQSVDSEITEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRYGQEFRQLLARDPKDKNKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNLFALEQFQTPDLRK 459
LV +N+RFL+GQ+VD++ITEGI++IL+ R SIE + VQSQW G + F++KAEVDFDGT+LAA+L +RY +EFR+ DK D LLS+Y EDVMR EREVR+ E EIR YP AAYIELEPDS + FA++ + L+K
Sbjct: 307 LVLLNQRFLLGQAVDADITEGIESILLQRRSIEGVSSVQSQWTGPYAFSYKAEVDFDGTYLAARLM--SRYKKEFRKATEGSSLDK----DLSVLLSWYAEDVMRLVEREVRDIEAEIRSVYPGAAYIELEPDSKYSDQFAIDDVKQEALQK 452
BLAST of mRNA_M-pyrifera_M_contig12346.4804.1 vs. uniprot
Match: A0A7S2UA45_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UA45_9STRA) HSP 1 Score: 141 bits (356), Expect = 2.580e-37 Identity = 84/165 (50.91%), Postives = 103/165 (62.42%), Query Frame = 1
Query: 1 MLVQVNRRFLIGQSVDSEITEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRYGQEFRQL------------LARDPKDKNKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNLFALEQFQTPDLRK 459
+LV+VN RFL+GQ+VD EIT GI+ IL++R SI+ +H VQSQW G TF++KAEVDFDGTFLAAKL RY EF Q+ D LLS+Y EDVMR EREVR E+EIRK+YP A YIELEP S + FA++ LR+
Sbjct: 228 ILVRVNHRFLLGQAVDREITGGIERILLARRSIDHVHSVQSQWTGPDTFSYKAEVDFDGTFLAAKLM--PRYQSEFLQVNNSXXXXXXXXXXXXXXXXXXXXSDLRVLLSWYAEDVMRTVEREVRHIESEIRKEYPGAEYIELEPMSKDADRFAIDDGMEAQLRR 390
BLAST of mRNA_M-pyrifera_M_contig12346.4804.1 vs. uniprot
Match: A0A067BE64_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BE64_SAPPC) HSP 1 Score: 137 bits (346), Expect = 3.210e-37 Identity = 81/151 (53.64%), Postives = 105/151 (69.54%), Query Frame = 1
Query: 4 LVQVNRRFLIGQSVDSEITEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRYGQEFRQLLARDPKDKNKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNLFALEQFQTPDLR 456
L+++N+RFL+GQSVD+EI +GIKA+L+SR SI+ ++ VQSQWVG TF+FKAEVDFDGT++AA+L Y F L A+D K D LL++Y EDV R E+EV+E E EIR YPEAA+IELEPDS ++ AL T R
Sbjct: 120 LIRMNQRFLLGQSVDAEIEQGIKALLLSRPSIDNVYAVQSQWVGPSTFSFKAEVDFDGTYMAAQLL--EIYKPVF--LEAKDLKA-----DLPLLLAWYAEDVTRLVEKEVQEVEAEIRALYPEAAFIELEPDSKDTDMRALSNLGTKSFR 261
BLAST of mRNA_M-pyrifera_M_contig12346.4804.1 vs. uniprot
Match: A0A7S1ZLR1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZLR1_9STRA) HSP 1 Score: 142 bits (358), Expect = 8.160e-37 Identity = 82/153 (53.59%), Postives = 104/153 (67.97%), Query Frame = 1
Query: 1 MLVQVNRRFLIGQSVDSEITEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRYGQEFRQLLARDPKDKNKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNLFALEQFQTPDLRK 459
+LV+VN RFL+GQ VD +I GI+ +L++ SI+ +H VQSQW G TF+FKAEVDFDGTFLAAKL RY +EF L AR+ D+ D LLS+Y EDVMRA EREV E EIR++YP A YIELEP + FA++ +LR+
Sbjct: 367 ILVRVNHRFLLGQGVDQDIVTGIEKMLLTHRSIDHVHSVQSQWTGPETFSFKAEVDFDGTFLAAKLM--PRYQKEF--LEARNTLDQ----DLRVLLSWYAEDVMRAVEREVHHIEAEIRREYPGAEYIELEPMGKDADKFAIDDGMEAELRR 511
BLAST of mRNA_M-pyrifera_M_contig12346.4804.1 vs. uniprot
Match: A0A7S3V4S7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4S7_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.030e-36 Identity = 82/153 (53.59%), Postives = 101/153 (66.01%), Query Frame = 1
Query: 1 MLVQVNRRFLIGQSVDSEITEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRYGQEFRQLLARDPKDKNKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNLFALEQFQTPDLRK 459
+LV+VN +FL+GQSVD EI +G++ ILM R SI+ +H VQSQW G TF+FKAEVDFDGTFLAAKL RY EF Q A +D LLS+Y EDVMR EREVR E EIR++YP A YIELEP S + A++ L++
Sbjct: 499 ILVKVNHKFLLGQSVDKEIRQGVEKILMERRSIDNVHSVQSQWTGPDTFSFKAEVDFDGTFLAAKLM--PRYQLEFAQASATLDQDLR------VLLSWYAEDVMRTVEREVRNIENEIRREYPGAQYIELEPMSKDADRLAIDDGLEASLKR 643
BLAST of mRNA_M-pyrifera_M_contig12346.4804.1 vs. uniprot
Match: A0A7S2RB90_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RB90_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.210e-36 Identity = 79/153 (51.63%), Postives = 100/153 (65.36%), Query Frame = 1
Query: 1 MLVQVNRRFLIGQSVDSEITEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRYGQEFRQLLARDPKDKNKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNLFALEQFQTPDLRK 459
+LV+VN RFL+GQ+VD + IK IL R SI+ + +QSQ+ G TF++KAEVDFDGTFLAAKL RY QEF L A+ P D N LLS+Y EDVMR EREV+ E EIRK+YP A YIELEP S + FA++ +++
Sbjct: 12 ILVRVNHRFLLGQAVDKSTVQNIKLILEKRRSIDNVQSIQSQYTGPETFSYKAEVDFDGTFLAAKLM--PRYQQEF--LKAQLPHDLN------VLLSWYAEDVMRTVEREVKHIEFEIRKQYPGAEYIELEPMSKDADRFAIDDGMEAQIKR 154 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12346.4804.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12346.4804.1 >prot_M-pyrifera_M_contig12346.4804.1 ID=prot_M-pyrifera_M_contig12346.4804.1|Name=mRNA_M-pyrifera_M_contig12346.4804.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp MLVQVNRRFLIGQSVDSEITEGIKAILMSRGSIEQLHQVQSQWVGTHTFAback to top mRNA from alignment at M-pyrifera_M_contig12346:4311..7266+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12346.4804.1 ID=mRNA_M-pyrifera_M_contig12346.4804.1|Name=mRNA_M-pyrifera_M_contig12346.4804.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2956bp|location=Sequence derived from alignment at M-pyrifera_M_contig12346:4311..7266+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12346:4311..7266+ >mRNA_M-pyrifera_M_contig12346.4804.1 ID=mRNA_M-pyrifera_M_contig12346.4804.1|Name=mRNA_M-pyrifera_M_contig12346.4804.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=918bp|location=Sequence derived from alignment at M-pyrifera_M_contig12346:4311..7266+ (Macrocystis pyrifera P11B4 male)back to top |