mRNA_M-pyrifera_M_contig123457.4803.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123457.4803.1 vs. uniprot
Match: A0A7C7VFZ0_9PLAN (Alginate lyase family protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7C7VFZ0_9PLAN) HSP 1 Score: 150 bits (378), Expect = 1.280e-39 Identity = 69/144 (47.92%), Postives = 89/144 (61.81%), Query Frame = 1
Query: 1 CDMWSRFRLGYRGHPSPLEHGQTGPFAWCRATHDAYRRIGVPVVGRWLACHKQRPWLCVDWAEGTGLHELTTRLHLAPDMVVTLESPQTACLQI--GERTLHVQSLTTAEFVIEKGWYCPDFGVRQETSVLKLTATCQMPGYIG 426
CD+WSRFR+GYRG P+ LEHG+ F W RA HDAYRR+ VP VGR LAC PWLCVD+A G G HELT+ LH PD V LE + C+++ G++T + L E + + WYCP FG R V++ ++P G
Sbjct: 459 CDLWSRFRMGYRGRPTRLEHGRQATFHWVRAEHDAYRRVRVPAVGRLLACRPGGPWLCVDYAHGRGQHELTSWLHFHPD--VRLEPLNSHCIRVVLGKQTFRLDLLRPGELTVGQAWYCPQFGRRIPAPVVRWHGLRRLPACCG 600
BLAST of mRNA_M-pyrifera_M_contig123457.4803.1 vs. uniprot
Match: A0A7V3NC85_9BACT (Alginate lyase family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V3NC85_9BACT) HSP 1 Score: 148 bits (374), Expect = 6.930e-39 Identity = 66/142 (46.48%), Postives = 84/142 (59.15%), Query Frame = 1
Query: 1 CDMWSRFRLGYRGHPSPLEHGQTGPFAWCRATHDAYRRIGVPVVGRWLACHKQRPWLCVDWAEGTGLHELTTRLHLAPDMVVTLESPQTACLQIGERTLHVQSLTTAEFVIEKGWYCPDFGVRQETSVLKLTATCQMPGYIG 426
CDMWSRFR+GYRG P PL+ GQTG F W A H+AYRR+ VP VGR +AC PW C+DWAEG G H L +RLHL PD+ + L LH++ L I+ GWYCP G+R ++V+ A +P +
Sbjct: 481 CDMWSRFRMGYRGWPGPLQTGQTGDFHWAWAWHNAYRRLRVPRVGRLVACRPGGPWFCLDWAEGRGTHRLVSRLHLHPDVRARQVDARAVELDSAAGLLHLEFLGPGTLTIQTGWYCPQLGLRLPSAVVCWQAEVPLPAAVA 622
BLAST of mRNA_M-pyrifera_M_contig123457.4803.1 vs. uniprot
Match: A0A7V4M6C3_9BACT (Alginate lyase family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V4M6C3_9BACT) HSP 1 Score: 144 bits (364), Expect = 2.070e-37 Identity = 66/142 (46.48%), Postives = 84/142 (59.15%), Query Frame = 1
Query: 1 CDMWSRFRLGYRGHPSPLEHGQTGPFAWCRATHDAYRRIGVPVVGRWLACHKQRPWLCVDWAEGTGLHELTTRLHLAPDMVVTLESPQTACLQIGERTLHVQSLTTAEFVIEKGWYCPDFGVRQETSVLKLTATCQMPGYIG 426
CDMWSRFR+G+RG P PLE G F W ATHDAYRR+GVP VGR+LAC PW CVDWAEG H LT RLHL P + S L+ G +L ++ LT ++ +CP+FGVR + V++ +P +
Sbjct: 559 CDMWSRFRMGHRGWPGPLETGCDDGFFWAWATHDAYRRLGVPRVGRFLACRSGGPWFCVDWAEGKRTHRLTHRLHLDPSVQTAFLSDVAIELRAGGASLRLEFLTPGRLSVDLACHCPEFGVRIQAPVIRWDIESPLPAAVA 700
BLAST of mRNA_M-pyrifera_M_contig123457.4803.1 vs. uniprot
Match: A0A5C6B638_9PLAN (Heparin-sulfate lyase n=1 Tax=Symmachiella macrocystis TaxID=2527985 RepID=A0A5C6B638_9PLAN) HSP 1 Score: 131 bits (329), Expect = 9.490e-33 Identity = 59/142 (41.55%), Postives = 78/142 (54.93%), Query Frame = 1
Query: 1 CDMWSRFRLGYRGHPSPLEHGQTGPFAWCRATHDAYRRIGVPVVGRWLACHKQRPWLCVDWAEGTGLHELTTRLHLAPDMVVTLESPQTACLQIGERTLHVQSLTTAEFVIEKGWYCPDFGVRQETSVLKLTATCQMPGYIG 426
CDMWS+FR+GYRG P L G W A+H+AYRR+GVP + RW+ C + W VD A GT H LT RLHL D++ ES T L + + SLT I +GW+CP+FG R V++ + +P G
Sbjct: 479 CDMWSKFRMGYRGWPGHLTSGTRDGIDWAHASHNAYRRLGVPRIDRWVICRQAGGWFVVDQAHGTKRHTLTNRLHLHADVIAVQESESTVRLIVNSDEYILASLTPGNLRITEGWFCPEFGKRIPAPVVEWSTNAALPAVSG 620
BLAST of mRNA_M-pyrifera_M_contig123457.4803.1 vs. uniprot
Match: A0A3L7PFB2_9BACT (Hepar_II_III_N domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7PFB2_9BACT) HSP 1 Score: 122 bits (307), Expect = 7.030e-30 Identity = 58/142 (40.85%), Postives = 80/142 (56.34%), Query Frame = 1
Query: 1 CDMWSRFRLGYRGHPSPLEHGQTGPFAWCRATHDAYRRIGVPVVGRWLACHKQRPWLCVDWAEGTGLHELTTRLHLAPDM-VVTLESPQTACLQIGERTLHVQSLTTAEFVIEKGWYCPDFGVRQETSVLKLTATCQMPGYI 423
CD+W +FR+GYRGH ++ G + WC A+HDAYRR+GVPVV R C + W C+D G+G H L +RLHL P++ VVTLESP L G++ G YCP+FG +VL+ T ++P +
Sbjct: 427 CDVWGKFRMGYRGHTQIIDEGHQDSYWWCHASHDAYRRLGVPVVARHFECREDGIWSCMDVLWGSGEHVLVSRLHLHPNVAVVTLESPWVELLVGGQKVRITFGGAEGILTTRPGQYCPEFGQVIPNTVLEWTRHTKVPAVV 568
BLAST of mRNA_M-pyrifera_M_contig123457.4803.1 vs. uniprot
Match: A0A2S8FCA5_9BACT (Hepar_II_III_N domain-containing protein n=2 Tax=Pirellulaceae TaxID=2691357 RepID=A0A2S8FCA5_9BACT) HSP 1 Score: 122 bits (305), Expect = 1.750e-29 Identity = 54/123 (43.90%), Postives = 71/123 (57.72%), Query Frame = 1
Query: 1 CDMWSRFRLGYRGHPSPLEHGQTGPFAWCRATHDAYRRIGVPVVGRWLACHKQRPWLCVDWAEGTGLHELTTRLHLAPDMVVTLESPQTACLQIGERTLHVQSLTTAEFVIEKGWYCPDFGVR 369
CD WS+FR+G RG SPL+ G F W ATHDAYR + VP +GR +AC PW+ +DWA+ +G H RLHLAP++ + + LQ+ TL + L E WYCP+FG R
Sbjct: 473 CDAWSKFRMGRRGKTSPLKSGVEHEFHWAAATHDAYRHLAVPELGRLVACRHGGPWIVLDWAKTSGEHSYVNRLHLAPEVRLGAQDNNGIDLQLPNMTLKLSLLGKGELSTSATWYCPEFGKR 595
BLAST of mRNA_M-pyrifera_M_contig123457.4803.1 vs. uniprot
Match: A0A2S8G0V2_9BACT (Hepar_II_III_N domain-containing protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8G0V2_9BACT) HSP 1 Score: 121 bits (304), Expect = 2.480e-29 Identity = 56/142 (39.44%), Postives = 77/142 (54.23%), Query Frame = 1
Query: 1 CDMWSRFRLGYRGHPSPLEHGQTGPFAWCRATHDAYRRIGVPVVGRWLACHKQRPWLCVDWAEGTGLHELTTRLHLAPDMVVTLESPQTACLQIGERTLHVQSLTTAEFVIEKGWYCPDFGVRQETSVLKLTATCQMPGYIG 426
CD+WSRFR+G RG S L+ G T F W ATH+AYR +GVP VGR LAC PW+ +DWA+G G H RLHL P++ + LQ+ + + L + + WYCP+FG R +++ +P G
Sbjct: 488 CDVWSRFRMGRRGKTSSLKTGTTHGFHWGAATHNAYRHLGVPEVGRLLACRPDGPWIILDWAKGRGSHTCMNRLHLGPEVTTGAVEGKQIELQLPGESASLSLLGMGQLSLAASWYCPEFGNRIARPMVEACYEGNLPYVAG 629
BLAST of mRNA_M-pyrifera_M_contig123457.4803.1 vs. uniprot
Match: A0A5C6AKD5_9BACT (Heparinase II/III-like protein n=1 Tax=Stieleria varia TaxID=2528005 RepID=A0A5C6AKD5_9BACT) HSP 1 Score: 110 bits (274), Expect = 2.720e-25 Identity = 57/144 (39.58%), Postives = 81/144 (56.25%), Query Frame = 1
Query: 1 CDMWSRFRLGYRGHPSPLEHGQTGPFAWCRATHDAYRRIGVPVVGRWLACHKQRPWLCVDWAEGTGLHELTTRLHLAPDMVVTLE-SPQTACLQIGERTLHVQSLTTAE-FVIEKGWYCPDFGVRQETSVLKLTATCQMPGYIG 426
CD+WSRFR+G RGH + G+ +WC ATHDAYR +GV VGR L W VDW G H+L +RLH+ P L + + A L G+ + ++SL ++ + GWYCP+FGVR VL+L+ + ++G
Sbjct: 431 CDLWSRFRMGRRGHITWRASGREDSLSWCVATHDAYRHLGVREVGR-LVLADGCSWTVVDWIRSRGQHQLVSRLHVHPSWRCELSGASEVAELIYGQDIVRLRSLRESDRWGKGTGWYCPEFGVRHPNDVLQLSQSSSGFAWLG 573
BLAST of mRNA_M-pyrifera_M_contig123457.4803.1 vs. uniprot
Match: A0A142WPN5_9PLAN (Heparin-sulfate lyase n=1 Tax=Planctomyces sp. SH-PL14 TaxID=1632864 RepID=A0A142WPN5_9PLAN) HSP 1 Score: 110 bits (274), Expect = 2.790e-25 Identity = 54/138 (39.13%), Postives = 76/138 (55.07%), Query Frame = 1
Query: 1 CDMWSRFRLGYRGHPSPLEHGQTGPFAWCRATHDAYRRIGVPVVGRWLACHKQRPWLCVDWAEGTGLHELTTRLHLAPDMVVTLESPQTACLQIGERTLHVQSLTTAEFVIEKGWYCPDFGVRQETSVLKLTATCQMP 414
CD+WS+FR+G RG P G+T ++WC A+H+AYRR GVP GRW+A W+ V+ G G T R HL PD+ T ESP L + ++L + E E+ YCP+FG R + +VL ++P
Sbjct: 448 CDLWSKFRMGRRGKPVRRASGRTEEWSWCFASHNAYRRAGVPETGRWMAARGGGFWVAVESLGGAGPRTATLRWHLHPDVTATRESPTEWRLAVAGQSLVLALPAEGETRQERYPYCPEFGCRIDAAVLVWQTRRELP 585
BLAST of mRNA_M-pyrifera_M_contig123457.4803.1 vs. uniprot
Match: A0A3M1RFV9_9BACT (Hepar_II_III_N domain-containing protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1RFV9_9BACT) HSP 1 Score: 105 bits (261), Expect = 1.090e-23 Identity = 50/144 (34.72%), Postives = 75/144 (52.08%), Query Frame = 1
Query: 1 CDMWSRFRLGYRGHPSPLEHGQTGPFAWCRATHDAYRRIGVPVVGRWLACHKQRPWLCVDW--AEGTGLHELTTRLHLAPDMVVTLESPQTACLQIGERTLHVQSLTTAEFVIEKGWYCPDFGVRQETSVLKLTATCQMPGYIG 426
CD++SRFR+G RGHP+ L HG+ G W +HDAYR +G+P V R++ C PW+ +D G H L +RLH PD+ +T + G+R++ V + + + Y P+FGVR + L T +G
Sbjct: 325 CDVYSRFRMGRRGHPTRLAHGRHGDLYWATCSHDAYRFLGIPSVRRYVVCRPGGPWVILDRLNTRTRGTHRLCSRLHAHPDIELTAVAADRITFAAGDRSVVVTPVGHNRLELTESTYHPEFGVRMPRPCITLRTTSPPATIVG 468 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123457.4803.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123457.4803.1 >prot_M-pyrifera_M_contig123457.4803.1 ID=prot_M-pyrifera_M_contig123457.4803.1|Name=mRNA_M-pyrifera_M_contig123457.4803.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=141bp MWSRFRLGYRGHPSPLEHGQTGPFAWCRATHDAYRRIGVPVVGRWLACHKback to top mRNA from alignment at M-pyrifera_M_contig123457:2..430+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123457.4803.1 ID=mRNA_M-pyrifera_M_contig123457.4803.1|Name=mRNA_M-pyrifera_M_contig123457.4803.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=429bp|location=Sequence derived from alignment at M-pyrifera_M_contig123457:2..430+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123457:2..430+ >mRNA_M-pyrifera_M_contig123457.4803.1 ID=mRNA_M-pyrifera_M_contig123457.4803.1|Name=mRNA_M-pyrifera_M_contig123457.4803.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=846bp|location=Sequence derived from alignment at M-pyrifera_M_contig123457:2..430+ (Macrocystis pyrifera P11B4 male)back to top |