mRNA_M-pyrifera_M_contig12345.4801.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12345.4801.1
Unique NamemRNA_M-pyrifera_M_contig12345.4801.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig12345.4801.1 vs. uniprot
Match: D7FU89_ECTSI (Phospholipid-transporting ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU89_ECTSI)

HSP 1 Score: 403 bits (1036), Expect = 2.600e-130
Identity = 196/243 (80.66%), Postives = 220/243 (90.53%), Query Frame = 1 
Query:   25 IVKRAWRTIRGQQNPLPVSNPSNWPNPTVKDLTDRPNRTVQVNRPQDFSFCDNFIKTSKYEVWSFMPKFLAMEFHPRKKIANLYFLIVSSMQARCSCTPRAIPAITSTFGYPILLAPLLFIVLIDMVFTIIEDASRHKADALANASQAVVLDKATGQWTIKERWEVAVGDFVKVYNREEIPADMLVVGVHERYRPNCAGVCYVETKSLDGEQTNLKIRQVQKVLLGRVDGHKDLESFSGRVTM 753
            + +R WR +RGQQNPLP +NP NWP PT++D+ +RP R VQ+N+PQ++SFCDNFIKTSKYEVWSFMPKFLA+EFHPRKKIANLYFLIVSSMQA        IPAITSTFGYPILL PLLFIVLIDM+FTIIEDASRHKADALANAS+ VVLDK +G+WT+KERWEVAVGDFVKV+NREE+PADM+VVGVHERYRPNC+G CYVETKSLDGE TNLKIRQVQKVLLGRVDGHKDL+SFSGR+ M
Sbjct:    1 MAQRLWRALRGQQNPLPSANPKNWPEPTIEDVLERPTRIVQINKPQEYSFCDNFIKTSKYEVWSFMPKFLAVEFHPRKKIANLYFLIVSSMQA--------IPAITSTFGYPILLLPLLFIVLIDMIFTIIEDASRHKADALANASRTVVLDKNSGKWTVKERWEVAVGDFVKVHNREEVPADMVVVGVHERYRPNCSGACYVETKSLDGE-TNLKIRQVQKVLLGRVDGHKDLDSFSGRIIM 234
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BLAST of mRNA_M-pyrifera_M_contig12345.4801.1 vs. uniprot
Match: A0A482SFD1_9ARCH (PhoLip_ATPase_N domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SFD1_9ARCH)

HSP 1 Score: 209 bits (532), Expect = 6.160e-61
Identity = 108/228 (47.37%), Postives = 151/228 (66.23%), Query Frame = 1 
Query:   70 LPVSNPSNWPNPTVKDLTDRPNRTVQVNRPQDFSFCDNFIKTSKYEVWSFMPKFLAMEFHPRKKIANLYFLIVSSMQARCSCTPRAIPAITSTFGYPILLAPLLFIVLIDMVFTIIEDASRHKADALANASQAVVLDKATGQWTIKERWEVAVGDFVKVYNREEIPADMLVVGVHERYRPNCAGVCYVETKSLDGEQTNLKIRQVQKVLLGRVDGHKDLESFSGRVTM 753
            LP +NP  WPN    ++++RP R V++  PQ + FC+NF+KTSKYEVW F+PKFL  EF+PR KIAN YFL++S +Q         IPAI++T GYP  L PLLF+V +D +F + ED SRH+AD  ANAS A+  ++A+  +   +  E++VGD VKV +R ++PAD++++ V E++ P   G+ YVETKSLDGE TNLKIR      + ++    DL    G V M
Sbjct:   46 LPHANPRGWPNSGPAEISERPKRIVKIGTPQVYWFCNNFVKTSKYEVWDFLPKFLLEEFNPRTKIANCYFLMISGLQC--------IPAISNTNGYPTTLIPLLFVVFVDALFQVFEDLSRHRADTAANASIALRYNRASNSFGECKWHEISVGDVVKVNSRGQVPADLVILAVSEKHEP-AQGISYVETKSLDGE-TNLKIRSALPCTMSKIKNEGDLAMLVGEVEM 263
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BLAST of mRNA_M-pyrifera_M_contig12345.4801.1 vs. uniprot
Match: A0A836CFX1_9STRA (Phospholipid-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFX1_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.990e-60
Identity = 119/235 (50.64%), Postives = 150/235 (63.83%), Query Frame = 1 
Query:   55 GQQNPLPVSNPSNWPNPT--VKDLTDRPNRTVQVNRPQDFSFCDNFIKTSKYEVWSFMPKFLAMEFHPRKKIANLYFLIVSSMQARCSCTPRAIPAITSTFGYPILLAPLLFIVLIDMVFTIIEDASRHKADALANASQAVVLDKATGQWTIKERWEVAVGDFVKVYNREEIPADMLVVGVHERYRPNCAGVCYVETKSLDGEQTNLKIRQVQKVLLGRVDGHKDLESFSGRVTM 753
            G  +  P SNP  W       +DL  RPNR V +N  QDF FC NF+KTSKYE +SF+P FL  EF+PR KIAN+YFL ++ +Q         IP+IT+TFG P +L PL+F+V +D VF +IED  RH+AD  AN+S   V D A G++      EV VGD +K+ NRE IPAD+L++ V E      AG+CYVETKSLDGE TNLKIRQV K L+G V    +  +  GRV M
Sbjct:   54 GSHHRKPKSNPKGWHRGKHRAEDLEARPNRIVNINAEQDFEFCTNFVKTSKYEPYSFLPLFLWEEFNPRTKIANVYFLFIAVLQV--------IPSITNTFGIPTMLLPLVFVVAVDAVFMVIEDVERHRADRRANSSPTAVWDAAAGKFRAVSWSEVHVGDILKIRNREAIPADVLLLSVAEPDPAAAAGICYVETKSLDGE-TNLKIRQVPKGLVGAVRRSAEAGALRGRVVM 279
[Close]
BLAST of mRNA_M-pyrifera_M_contig12345.4801.1 vs. uniprot
Match: D7G0C1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C1_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 2.380e-53
Identity = 105/229 (45.85%), Postives = 146/229 (63.76%), Query Frame = 1 
Query:   73 PVSNPSNWPN--PTVKDLTDRPNRTVQVNRPQDFSFCDNFIKTSKYEVWSFMPKFLAMEFHPRKKIANLYFLIVSSMQARCSCTPRAIPAITSTFGYPILLAPLLFIVLIDMVFTIIEDASRHKADALANASQAVVLDKATGQWTIKERWEVAVGDFVKVYNREEIPADMLVVGVHERYRPNCAGVCYVETKSLDGEQTNLKIRQVQKVLLGRVDGHKDLESFSGRVTM 753
            P SNP  W     T  D+  RPNR V +N  Q+  F  N ++T+KYE + F+P+FL  EF+P  KIAN+YFL ++++Q         IP+IT+TFG P++L PL F+V +D +F I ED +RH+AD  AN+S     D+ +G++      E+ VGD + + NRE IP D+L++GV E    + AGV YVETKSLDGE TNLKIRQV K ++G++   +D    SGRV M
Sbjct:   64 PPSNPPGWSEGKSTAYDVAQRPNRVVVINAEQETEFASNMVRTAKYEYYDFLPRFLWEEFNPATKIANVYFLFIAALQV--------IPSITNTFGIPLMLLPLFFVVCVDAIFMIFEDIARHRADRHANSSLTRAWDRRSGEFKYITWKEIEVGDLIVINNREPIPCDVLIMGVDEPISQSPAGVAYVETKSLDGE-TNLKIRQVVKGVVGKLLTPEDCAKLSGRVVM 283
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BLAST of mRNA_M-pyrifera_M_contig12345.4801.1 vs. uniprot
Match: A0A7S3HLE4_9STRA (Phospholipid-transporting ATPase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLE4_9STRA)

HSP 1 Score: 195 bits (495), Expect = 3.130e-53
Identity = 104/223 (46.64%), Postives = 144/223 (64.57%), Query Frame = 1 
Query:   85 PSNWPNPTVKDLTDRPNRTVQVNRPQDFSFCDNFIKTSKYEVWSFMPKFLAMEFHPRKKIANLYFLIVSSMQARCSCTPRAIPAITSTFGYPILLAPLLFIVLIDMVFTIIEDASRHKADALANASQAVVLDKATGQWTIKERWEVAVGDFVKVYNREEIPADMLVVGVHERYRPNCAGVCYVETKSLDGEQTNLKIRQVQKVLLGRVDGHKDLESFSGRVTM 753
            P NWP+PT  DL  RP R + +  PQDFSFC+N I+T KYE ++F PKFL  EF+P++KIAN YFL ++ MQ         I  I++T GYP +L PL  ++ +  +F I+ED +RHKAD  AN+S   + D+ +  +      EV VGD V+V +R+ +PAD++V+ V E       G+CYVETKSLDGE TNLK+R V   LLG++  + DL SF+G + M
Sbjct:    7 PKNWPSPTQADLDARPQRLINIGTPQDFSFCNNSIRTYKYEWYTFPPKFLLEEFNPKQKIANCYFLTIAGMQC--------IGPISNTNGYPTVLIPLTVVLFVAGLFKILEDTARHKADKKANSSTTEIFDRKSQTFKTVLWSEVVVGDIVRVESRQIVPADVMVLEVAEPNPAQPKGMCYVETKSLDGE-TNLKVRTVVPALLGKIKTNGDLSSFTGSIEM 220
[Close]
BLAST of mRNA_M-pyrifera_M_contig12345.4801.1 vs. uniprot
Match: A0A7S1XUW1_9STRA (Phospholipid-transporting ATPase (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUW1_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.970e-43
Identity = 99/245 (40.41%), Postives = 144/245 (58.78%), Query Frame = 1 
Query:   40 WRTIRG-----QQNPLPVSNPSNWP-NPTVKDLTDRPNRTVQVNRPQDFSFCDNFIKTSKYEVWSFMPKFLAMEFHPRKKIANLYFLIVSSMQARCSCTPRAIPAITSTFGYPILLAPLLFIVLIDMVFTIIEDASRHKADALANASQAVVLDKATGQWTIKERW-EVAVGDFVKVYNREEIPADMLVVGVHERYRPNCAGVCYVETKSLDGEQTNLKIRQVQKVLLGRVDGHKDLESFSGRVTM 753
            W T+ G       + +P S P  WP N   ++L  +P R V +N  Q FSF  NF+K+S+Y + +F+P FL   FHPR K AN YFL+++++Q         I  I++T GYP +LAP+L IVL+D V  ++ED  +H+AD +AN +   VL +  G W+    W +V VGD ++V NRE  PAD++++ V E    +  G+CYVETKSLDGE T+LK+RQ  +  L      + L    G  T+
Sbjct:   37 WNTVMGWLGMPSTDGMPASPPRGWPDNVKAEELEAQPERVVSINGAQRFSFRSNFVKSSRYTLATFLPMFLYESFHPRLKGANFYFLVIAALQT--------IDEISNTNGYPTMLAPILIIVLVDGVMAVLEDLEKHEADRVANGTLTAVLQE-DGSWSDPIPWMDVRVGDIIRVRNREVSPADVMLLAVAEPDPRSKQGLCYVETKSLDGE-TDLKLRQALEATLEA--SPRQLRELRGSATL 269
[Close]
BLAST of mRNA_M-pyrifera_M_contig12345.4801.1 vs. uniprot
Match: A0A6A3YZ75_9STRA (Phospholipid-transporting ATPase n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YZ75_9STRA)

HSP 1 Score: 162 bits (410), Expect = 7.690e-42
Identity = 93/200 (46.50%), Postives = 124/200 (62.00%), Query Frame = 1 
Query:  148 VNRPQDFSFCDNFIKTSKYEVWSFMPKFLAMEFHPRKKIANLYFLIVSSMQARCSCTPRAIPAITSTFGYPILLAPLLFIVLIDMVFTIIEDASRHKADALANASQAVVLDKATGQWTIKERWEVAVGDFVKVYNREEIPADMLVVGVHERYRPNCAGVCYVETKSLDGEQTNLKIRQVQKVLLGRVDGHKDLESFSGRV 747
             NR  +  FC+NFI TSKY V SF+PKFL   F   +K++NLYFLI+        C  + IP I++T G P  L PLLFI+ +D VF ++ED  RH+AD +ANAS  +VLD+ T ++      +V VGD VKV NR  +PADMLV+ V E    N  G+CYVETKSLDGE TN+K+R   +  L  +    +L +  G +
Sbjct:   20 ANRNTEAGFCNNFIVTSKYTVASFLPKFLFESF---RKLSNLYFLII--------CILQCIPEISNTSGQPSTLPPLLFIITVDGVFAVLEDHKRHQADNVANASPTLVLDRETRKFKEVSWADVVVGDIVKVVNRGLVPADMLVLAVSEVSAQNPCGICYVETKSLDGE-TNMKVRSAMECTLASMGSVDNLVAMKGVI 207
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BLAST of mRNA_M-pyrifera_M_contig12345.4801.1 vs. uniprot
Match: A0A024U8V7_9STRA (Phospholipid-transporting ATPase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U8V7_9STRA)

HSP 1 Score: 160 bits (405), Expect = 3.580e-41
Identity = 90/195 (46.15%), Postives = 125/195 (64.10%), Query Frame = 1 
Query:  163 DFSFCDNFIKTSKYEVWSFMPKFLAMEFHPRKKIANLYFLIVSSMQARCSCTPRAIPAITSTFGYPILLAPLLFIVLIDMVFTIIEDASRHKADALANASQAVVLDKATGQWTIKERWEVAVGDFVKVYNREEIPADMLVVGVHERYRPNCAGVCYVETKSLDGEQTNLKIRQVQKVLLGRVDGHKDLESFSGRV 747
            +F+FCDN + TSKY V SF+PKFL   F   +K AN YFL+VS MQ         IP+I++T G P     LLFI++ID +F I+ED  RH ADA+AN+     LDK   Q+T +E  ++ VGDFVK+ NR+++PAD+L++ V E+      G+CYVETKSLDGE TN+K+RQ  +  + +     +L +  G V
Sbjct:   20 EFAFCDNAVVTSKYTVLSFVPKFL---FETFRKFANAYFLVVSMMQV--------IPSISNTNGLPSTAPTLLFIMVIDAIFAILEDRKRHVADAIANSRVTNALDKDNAQFTPREWKDLCVGDFVKLGNRDQVPADLLILAVSEQPSVPPTGLCYVETKSLDGE-TNMKVRQAMQCTMTKCRSPAELLALKGMV 202
[Close]
BLAST of mRNA_M-pyrifera_M_contig12345.4801.1 vs. uniprot
Match: A0A7R9U359_9STRA (Phospholipid-transporting ATPase n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U359_9STRA)

HSP 1 Score: 157 bits (397), Expect = 4.370e-40
Identity = 89/212 (41.98%), Postives = 132/212 (62.26%), Query Frame = 1 
Query:   70 LPVSNPSNWPNPT-VKDLTDRPNRTVQVNRPQDFSFCDNFIKTSKYEVWSFMPKFLAMEFHPRKKIANLYFLIVSSMQARCSCTPRAIPAITSTFGYPILLAPLLFIVLIDMVFTIIEDASRHKADALANASQAVVLDKATGQWTIKERW-EVAVGDFVKVYNREEIPADMLVVGVHERYRPNCAGVCYVETKSLDGEQTNLKIRQVQKVLL 699
            LP S P  WP+    +DL  +P R V+VN  Q+F+F  NF+++ +Y   +F+P FL   FHP  K AN YFL+++ +Q         +  I++T G+P +L P+L I+++D V  ++ED  +H+AD +AN S   VL ++ G W     W +V VGD ++V NRE  PAD+L++ V E    + +G+CY+ETKSLDGE TNLK+RQ  K  L
Sbjct:   21 LPPSPPRGWPDRARPEDLVAQPRRVVKVNASQNFAFRTNFVRSYRYTPATFLPLFLYESFHPLYKGANFYFLVIAILQT--------VSEISNTNGFPTMLGPILIILIVDGVMAVLEDVEKHEADRIANGSLTSVL-QSDGTWGEPIPWMDVQVGDIIRVKNREISPADLLILAVAEPDPAHVSGLCYIETKSLDGE-TNLKMRQACKATL 222
[Close]
BLAST of mRNA_M-pyrifera_M_contig12345.4801.1 vs. uniprot
Match: A0A2D4BFD9_PYTIN (Phospholipid-transporting ATPase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFD9_PYTIN)

HSP 1 Score: 152 bits (384), Expect = 2.110e-38
Identity = 88/207 (42.51%), Postives = 127/207 (61.35%), Query Frame = 1 
Query:  136 RTVQVNRP---QDFSFCDNFIKTSKYEVWSFMPKFLAMEFHPRKKIANLYFLIVSSMQARCSCTPRAIPAITSTFGYPILLAPLLFIVLIDMVFTIIEDASRHKADALANASQAVVLDKATGQWTIKERWEVAVGDFVKVYNREEIPADMLVVGVHERYRPNCAGVCYVETKSLDGEQTNLKIRQVQKVLLGRVDGHKDLESFSGRV 747
            R V +N P   ++  +CDNFI TSKY + +F+PKFL   F   +K+ANLYFL++        C  + +P I++T G P  L PLLFI+++D VF I+ED  RH AD LAN+    VLD AT  +  K   +V VGD +++ NR+ +PAD+LV+ V E      +G+CYVETKSLDGE TN+K+R   ++ +  +    +L    G +
Sbjct:   54 RIVHLNDPARNKEQGYCDNFIVTSKYTLLTFVPKFL---FETFRKLANLYFLLI--------CILQCVPQISNTGGQPSTLPPLLFIIMVDAVFAILEDRKRHIADNLANSRPTSVLDPATKSFVTKPWADVIVGDIIRLSNRDLVPADILVLAVSEIPDSPPSGLCYVETKSLDGE-TNMKVRSALEITMCEMGSIDNLLQMRGVI 248
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12345.4801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU89_ECTSI2.600e-13080.66Phospholipid-transporting ATPase n=1 Tax=Ectocarpu... [more]
A0A482SFD1_9ARCH6.160e-6147.37PhoLip_ATPase_N domain-containing protein n=1 Tax=... [more]
A0A836CFX1_9STRA1.990e-6050.64Phospholipid-transporting ATPase n=1 Tax=Tribonema... [more]
D7G0C1_ECTSI2.380e-5345.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3HLE4_9STRA3.130e-5346.64Phospholipid-transporting ATPase n=2 Tax=Spumella ... [more]
A0A7S1XUW1_9STRA1.970e-4340.41Phospholipid-transporting ATPase (Fragment) n=2 Ta... [more]
A0A6A3YZ75_9STRA7.690e-4246.50Phospholipid-transporting ATPase n=8 Tax=Phytophth... [more]
A0A024U8V7_9STRA3.580e-4146.15Phospholipid-transporting ATPase n=2 Tax=Aphanomyc... [more]
A0A7R9U359_9STRA4.370e-4041.98Phospholipid-transporting ATPase n=2 Tax=Pinguioco... [more]
A0A2D4BFD9_PYTIN2.110e-3842.51Phospholipid-transporting ATPase n=1 Tax=Pythium i... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12345contigM-pyrifera_M_contig12345:202..7896 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score405.2
Seed ortholog evalue2.2e-110
Seed eggNOG ortholog2880.D7FU89
KEGG koko:K01530,ko:K14802
KEGG TC3.A.3.8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.phospholipid-translocating ATPase activity
EggNOG OGsCOG0474@1,KOG0206@2759
EC3.6.3.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Exons7
Model size756
Cds size756
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815753.1183133-CDS-M-pyrifera_M_contig12345:201..2991622815753.1183133-CDS-M-pyrifera_M_contig12345:201..299Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12345 202..299 -
1692277553.1828399-CDS-M-pyrifera_M_contig12345:201..2991692277553.1828399-CDS-M-pyrifera_M_contig12345:201..299Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12345 202..299 -
1622815753.1348593-CDS-M-pyrifera_M_contig12345:1112..12271622815753.1348593-CDS-M-pyrifera_M_contig12345:1112..1227Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12345 1113..1227 -
1692277553.1921356-CDS-M-pyrifera_M_contig12345:1112..12271692277553.1921356-CDS-M-pyrifera_M_contig12345:1112..1227Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12345 1113..1227 -
1622815753.1451156-CDS-M-pyrifera_M_contig12345:1967..20901622815753.1451156-CDS-M-pyrifera_M_contig12345:1967..2090Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12345 1968..2090 -
1692277553.1996653-CDS-M-pyrifera_M_contig12345:1967..20901692277553.1996653-CDS-M-pyrifera_M_contig12345:1967..2090Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12345 1968..2090 -
1622815753.1571202-CDS-M-pyrifera_M_contig12345:3445..35411622815753.1571202-CDS-M-pyrifera_M_contig12345:3445..3541Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12345 3446..3541 -
1692277553.207093-CDS-M-pyrifera_M_contig12345:3445..35411692277553.207093-CDS-M-pyrifera_M_contig12345:3445..3541Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12345 3446..3541 -
1622815753.1707582-CDS-M-pyrifera_M_contig12345:6530..66621622815753.1707582-CDS-M-pyrifera_M_contig12345:6530..6662Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12345 6531..6662 -
1692277553.2147558-CDS-M-pyrifera_M_contig12345:6530..66621692277553.2147558-CDS-M-pyrifera_M_contig12345:6530..6662Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12345 6531..6662 -
1622815753.184955-CDS-M-pyrifera_M_contig12345:7159..72141622815753.184955-CDS-M-pyrifera_M_contig12345:7159..7214Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12345 7160..7214 -
1692277553.2223485-CDS-M-pyrifera_M_contig12345:7159..72141692277553.2223485-CDS-M-pyrifera_M_contig12345:7159..7214Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12345 7160..7214 -
1622815753.2004511-CDS-M-pyrifera_M_contig12345:7759..78961622815753.2004511-CDS-M-pyrifera_M_contig12345:7759..7896Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12345 7760..7896 -
1692277553.2304623-CDS-M-pyrifera_M_contig12345:7759..78961692277553.2304623-CDS-M-pyrifera_M_contig12345:7759..7896Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12345 7760..7896 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12345.4801.1prot_M-pyrifera_M_contig12345.4801.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12345 202..7896 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12345.4801.1

>prot_M-pyrifera_M_contig12345.4801.1 ID=prot_M-pyrifera_M_contig12345.4801.1|Name=mRNA_M-pyrifera_M_contig12345.4801.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=252bp
RRRKKQGNIVKRAWRTIRGQQNPLPVSNPSNWPNPTVKDLTDRPNRTVQV
NRPQDFSFCDNFIKTSKYEVWSFMPKFLAMEFHPRKKIANLYFLIVSSMQ
ARCSCTPRAIPAITSTFGYPILLAPLLFIVLIDMVFTIIEDASRHKADAL
ANASQAVVLDKATGQWTIKERWEVAVGDFVKVYNREEIPADMLVVGVHER
YRPNCAGVCYVETKSLDGEQTNLKIRQVQKVLLGRVDGHKDLESFSGRVT
M*
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mRNA from alignment at M-pyrifera_M_contig12345:202..7896-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12345.4801.1 ID=mRNA_M-pyrifera_M_contig12345.4801.1|Name=mRNA_M-pyrifera_M_contig12345.4801.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7695bp|location=Sequence derived from alignment at M-pyrifera_M_contig12345:202..7896- (Macrocystis pyrifera P11B4 male)
AGGCGGAGGAAAAAGCAGGGGAACATTGTGAAGAGAGCCTGGAGGACGAT
TAGGGGGCAGCAGAACCCGCTCCCCGTCTCCAACCCCAGCAACTGGCCCA
ACCCCACCGTCAAAGACCTCACGGACCGACCCAACAGGTAACAGGCAGAG
GGTGGCAGACTGGTGGGCTGGCTTGCGTATTTTACCACACCCCGGTGGTA
ATTTTCATAGCGTCACACCCTGGGACGAATGAAAATGTCGAAGACCTGGC
AGACCGACCTCTGTTTATGGGTCGGGTCAAACCTCTCGGGTCAGGTCGGG
GCGGGTCGGGTAAGGGTGGCCCGACCCGACCCGCGAGAGTTTAAAAACCT
CATGACCCGACCCGACCGGACCCGACCCGACCCGACCCGCGAGATTTCGA
AAACTTCCTGACCCGTGAAGATCCCCGGCGAAAAACAGGGGAAGAACAGG
CAAGGTGGCAGGCTAGGTATACGAAGCAGGCATACGTAGATATCACACCC
GGTTGTTTTTGGAGGCAGGGGGGGGCGGAGTGGCCGGCTGATGGCGCGTA
CACTTTCAATGTCTTGAATGATGATCTGATTTTTTCCTTTTCGTTTTTTT
CTCTGTTTCTCGCTGTGTTTTGTTTTATTGTTCTTGCGTGTTTGCCGCAT
TTTTCATGTGGCCGCTCTCTGTTCCATTCCAGGACGGTTCAAGTCAACAG
ACCGCAGGATTTTTCTTTTTGCGACAACTTCATCAAGGTGAGAGAGGGGA
GGGGAGGGGAGGGGAGGGGAGGGGAGGGAGAGGAAAGAGGTATTTGGGGG
CGGAGACTTCGATAGATCGGGTTCAGATGCACGAACATAAATATGTCAAG
ATGGACGAACATCAAGGTGGATTCAATACACACCGGGCAGATACCAGTAT
ATATTATCGACTATATTTGGAACGGCGCGATCAGCTGAGCACCCGTCGAC
TTCTGACTAATGCCGGCGCTATTTGGCCCGAAATTGAACCGCAATTAATC
CTTGGTGAGTATGTATCTCTCTGTGTGTGTCCCCTCCCCCTCCCTCCCTC
CCTCCCTCCCTCCCTTCTTCCCTCCTTCCCTCCCTCCCTCCTCACATTTC
CCGATAAATGTCTCTCCTTCCCCTCCTCTATATCTCTATTTCCCCCGTTA
TGGCTGCCCCTAAAAATGTATCCCCATCCCACATCTCTCTTTTGCCTTTT
GCTCTCTCTTTTTTTTTTGTCCGATGCTCACAAGACTTCGAAGTACGAGG
TCTGGTCTTTCATGCCGAAGTTCTTGGCGATGGAATTCCACCCACGGAAG
AAGATCGCCAACTTGTATTTCCTCATCGTCTCTTCCATGCAGGCAAGATG
TTCATGCACCCCAAGGGTTATTGTATACCTGGTAATACCATACAGCATGG
CTCCGCTGACACTAATCAGAGCTATATCGGTGGGCCATAGTAAATAGGAC
CAAATTTTGGTAGTATAAAAAGGTAAATATATAGGTTTTTGGTGTGTGCC
ATGGGTCCTATTTACTATGATCCCCCGTAATAAGCCTTGGAAAAACATTG
CGCCAGAGCAAAAGCCCTGAAACCTTACTGGCCAGAGCGAAAGCCTCAGG
ACCTTAACCCCGTCAGTACCGCAGTCCCGATTTGGGGACAAACCAGTCTA
ATTCCAAGTGATTTGTCCCCAAGTCAGGACTGCGGTTCTAAAAGAGTTGA
GGCGTCAGAGCGAAAGCCTTCGAACCTCAATGCGACAAGATCCTTGAACG
ATCTTGAGCATAGAGAGGCTATTACGGAGGACCATTGGTAATGGATGGGA
TCTATGATATACATAAAAAGGCTATATATTTGCCTATTTTTACTAACAAT
GTTTGGTCCTATTTACCGTGGTCCCCCGTAATGGTAAATAGGACCTACGG
CACACATAAAAAACCTTTGTGTTTACCTATTTTTACTAGCAATATTTGGT
CCCATTTGCTATGGTCCTCCGTAATAGTGTAGTAGTTGTACGGTCCGTTT
TGGGACCCCCGGGATGGCCCACCAAAACAATGGTTGGTAACTTCTTCGTG
TGTTATCAACCATCTGTCTAGGAGCAGCGGGAGCGTCCAGCGGGCGAGAG
ACAGTAATTTCGGCCCCGAGGGTGGAATAAATGCTTACAGCATGGGCCCG
CCTGCATGGGGCACACCGAATATGAGCAGAACCTTCGAAAACCTCAACCC
TTTAAGTGCTACAGAGTCCCGTTTTGGGGGTCGAACTACTCAGAAATTGA
GTGGTTTGTCCCCCCCCCCAAAAAAAAAAAAAAAACGGTTCATGTGGCAT
GCATGGTCCTTAAACAACCTCGAGCATAGGCTATTGTATGGTATTTTGAT
GTGGCTCTCGCCCCAAAGCACGATTTCTTTCTTAACCCTTCATTCAAGGA
CTGCAGTATCGTTTTCGGGAGAAACCATTATAATTTTGAGTAGTTTGTCC
CCAAAACGAGACTGCGGTGCTAAAAGGTTTTTTTTTGCTGTCGTTTATTA
CGGAGGACCATAGTAAATAGGATCTACGGTAAACACAAAAAACTATATAT
TTACCTTTTTTTATTGACACAATTTGGTCCTATTTACTATGGTCCCCCGC
AATATAACGGGGGTCCATAGTTGATAGGACCTACGGTATACGTAAAAACC
TATATATTGATCTATTTTTACTAACAATATTTGGCCCTATTTACTATGGT
CCCCCGCAATGGTAGCTTTCCCCCAAAGGCGAGCCTTATGTTACATTATC
ACGTACAATTATGGGCCGTAAAAATAAGGGTTGTTTTGTATTGTTTTTAA
TGTGTATAGGATCCTTATATTACCGTCCAGAGTGGTGGGTTGCTTGTTTG
TTGTGTATGTGTGGGACCATGCTGCAGTTATATTAATAGCAGTCGCTATT
AGTAGGAACTCGCGAGGCAGGATATTTGTACCTGCCTTCAACTTGTGTGC
GTTGGTCGGTTTTTGATGGATTTGGATGATCGTGTACCAGGTATGGATTG
ATGGATTTGGATGATCGTGTACCAGGTATGATGTAATATGTCGTGTCCTC
GAATTGGTTAAAAAAAAATAAAAAAAATCCACCCTGTCCCTGAATTTGAG
GAACGTTTTCATGACAATATTGATTCAAAACGCCCATTATAGGAACGTTT
TCATGATGATATTGAATCAAAACCGTCATTGTGGTAGCGTTTTCATGATG
ATATTGAATCAAAATGGTCATTATGGGAACGCTTTCATGATAATATCGAA
TCAAAATGGTCAGTATAGGAACGTTTTCATGATAATATTGAATCAAAACG
GTCATTATAAGAACGTTTTCATGATAAAATTGAATCTAAACGGTCATTAT
AGGAACGTTTTCATGATATTGAATCAAAACGGTCATTGTGGTAACGTGTG
CATGATGATCTTGAATCAAAACGGTCATTGTGGTAACGTTTTCATGATAA
TATTGAATCAAAATGGTCATTATAGGAACGTTTTATTAATAGAACGTTTT
CATGATAATATTGAATCAAAACGGTCATTGCAAGAACGTTTTCATGATAA
TATTGAATCAAAACGGTCATTGTAAGAACGTTTTCACGACAATATTGAAT
CAAAACGATCATTGTAGAAACGTTTTCATGATAATATTGAACTAAAACGA
TGATCACATTTCGGTACAGTATAGTATAGTGCGCCTCGGAGGGGGAAGCC
AATGAATGTCTTCATGTTTGCATGGTTTTGATTTATCTTTTCTCGTCTCC
CAAAAAAAGAAAATGCTATACCTGGTAGTATTTTCACCCATACCTCAAGG
CCGCGCGCGGCAAACAGACGAAAACACTCATACGATCACAATGAAAAGCA
TACCAGTGAGGTGAGATTTATGGACGAATCTACGAAAATCGTACCTGGTA
TATATATGTATATATATATGTATTTTTTTTTGCTTGATTTTATTTTACCC
TTCTTTTGTCTGGGTCTCGAAAATGGATAATGGGTTGTCTTTTTTTTTCT
TTTTTTCGTACACCCCTGTCTGATCTACTAGGTACGTAATCTTTCCGTCC
GTACACCTATCATACTGCGACTACTGCATCTACGGCGTAAATTCTGCATC
TACGGCGTAAATTCTGCATCTACTCTACCTACTGAGTACTCGTATACTGC
ATCAATTTTGCGCACGCACTGTACGTACTGCGTGAGTTCTGTATCTGCGT
TACCTACTTCGACTACCGCTGTACCTATTGCATATACCGCATCAACTTCG
CCTGCTGCACCTACTGCGACTTCACGCGTACTGCTGTACCTACTGCGTGA
TTTCTGCATCTACTTGATCTGCTGTTCTATCTACCGTACCCGCTGTACCG
CGCAGGCTATCCCGGCGATCACGAGCACCTTCGGCTACCCCATCTTGCTG
GCCCCTCTGCTGTTCATCGTCCTCATCGACATGGTCTTCACCATCATTGA
GGTGATGCGACCGCCCTACCATCCGGGCAGCGCCAACGAAACCCCTAGAA
GTGCAGACTCGCCGCAACCGCGAAGACCGCCGAGTTGGCACCGGGATAGG
GATGCGACCGTTTTTTTTTCAGTGCTCGTTTTATCGACAACGGTAAATAA
GTACTATTACGGGGGGCCATAGTAAATAGGACCAGATATTGTTGGTAAAA
ATGGGTAAATATATAGGTTTTTATGTATACCATAGGTCCTATTAACTATG
GCCCCCCGTAATAGTACATGTCTTAACGGTGCTTTTATAAAAGTTTAGCA
TCACATTTTCGGAAAGCTCTCGACCAGATGTTTCCGAAAACGCCTTAAGG
TTGTTTCGATGTTGACAATCTTCCCGTTTCTGCGAAAAAACCCGAGCGCT
TAAAAACGATCGCACTCCTGTGCAAAGTCGACGCTCTTTGCGTACGCAGT
TATTGCAACCTGGTCGATTATGGTGTACTCTCGGCCTCGAGCGGCTCCCG
CGGAGTGCTTGCTGATTATATATATATATATATATTGTCGACCAATCAGG
GGGAGCAGGGTGCCGAACGGGTTGCCGAGTGGGATCAGGCCCGGGCGGAA
TCAGGCTATAGAGGTGTCGACAAATCAAAATGGAGGTTTTGGTTTGTGTT
GGGGTTGGTTGGGTGGCGTGTTTGACCTTGAAACACTGAAAAACACCGAT
GATAACGTTACGGCGAGTTGCGATGCTGGTGGAGGCTTCGAGAGCTAGAG
TACAAGGAGGTTTTTTTTTGTCCTAAAAAATTGTCTGCTCTCGTCGTAAC
CGTTGTGAGACTTGTTGAGAGAGAGAGTGATTCTCACGTCTGGTAGATAA
TCGATTTCCACGTGATGGTCTACAGTACAGCGGTGGTTAGTTAGCCCCGT
TTAGACTGCAGTCCCGGTTTGGGGACAGACTGCTTGATAATTGACTGGTT
TGTGCCCCCAACGGGACTACGCTCCTAAAAGGGTCTGGACGCTCTGGTTC
ACGTTGCCGGATTGTTGCTTGCTTGGTTGCGCTTGCTTGCTTGCTTGCTT
GCTTGCTTGCTATCTTGCTTGCTTGCTTGCTTGCTTGCTTGGGTAGCTTG
GTTGTGCTTGCTCGCTTGCTTGCTCGCTTGCTTGCTGGGTAGCTTGGTTG
TGCTCGCTTGCTCGCTCGCTCGCCTGCTACTATATACTTTCTACTTTTCG
CAAAAAAACGCCTCGGCACAACGAAACTCCATGAAATTGACCCCCCCCCC
CCACTCCCCCCCGCTAAACTCCCCTCCTCCTTCCCCCTGGCCCCCTTCGA
TTCATGGCTCGTTCCGTGTGACCCATCCCTCCCCGCCCCCCCGCGCGTTC
TTGAAGGATGCGAGTCGACACAAAGCGGACGCCTTAGCGAATGCCTCGCA
GGCTGTAGTGTTGGATAAGGCGACGGGACAGTGGACCATCAAGGAGCGCT
GGGAGGTAGCGGTGGGAGACTTCGTCAAGGTGAGCGAAAATCAGCGGTAT
CACCCAAAAAAAAACGTGTGTGCGGGGTTTTTGTTTTTTGTTTCGGTTTG
TGAGGTTGGTTTTATTTTTGCGTTGTTTGTTTATGTGTGTGTTTTTCATT
CGTGTGTGTGTGTGTGTGTATGTTTTTTTCCCGTGTGTACGGAATCGGAA
GTACCGTCCGTATAGATGTACTTGGTAACATTTTCTACAATACCGAAAGG
TCCTTGCATTTCCGTCGAGAGGGGTATGTGGGGTGTTTTTGAAACAATTC
GTTGGAACCGTTTTAGTCGGGTTTCTTGTGGTCTATTTCCTACATGAAAA
TGGCCCCAACCCAGGGAACCTTAACCCGCCTGTTATTAACAGTACGAGTT
TGGCCAACCCACGAATAATTATTATGCGTTAAACTTGGCTTTTTTGGCCA
TTTTTCGCCACGATCGTGGGTTGGGATCATTTGTATGTAGGAAACAGGCC
ACAAGAAACCCGAGTGAATTAGGATTAACCAAATTCTTCGCGAAGACCCT
TGTGTTTGCGGTGTGTGTACCTCCTGTATCATCGATGTTTTTTATGGGTT
TTTTCTTTTGTTTTGTACGAGTCGTATTCATGGTGTACGTTTCTGTGTTC
TTGTCCTTTTTGTTCCGTTCTGTATATGCTTCGAGTACACATGTTCCGAG
AGTCTTGCGTGCCAGGTACCCATATCTGCATGCTATTTTTTTGTTATTTT
GGGTGCTTCACTGACGCAGGTGTACAACCGAGAGGAAATACCGGCGGACA
TGCTCGTGGTCGGAGTTCACGAGAGGTACAGGCCTAACTGTGCGGGGGTC
TGCTACGTCGAGACCAAATCCCTGGACGGTGAGCGTTTCAAGTTGTTGCA
CACCTCGGACAGATCATAGCGTCCCACGTCATCATCATCTATTATTACGG
GGGACCATAGTAAATAGGACCTACGGTACACACAAAAACCTACCATATGT
TGACCTATTTTTACTAACAATATTTGGTCCTATTTACTATGGTCCCCCGT
AATAGCTGAAAATAAGAACTGTCGACGAGATAGAAGGGGATCCTCGAAGG
AGACTGAGGAAACCTGAAAATATATCCCCTGTCCCCGACTTCAGGGAAGG
CCTCATCCTAGAAAACGGTCTGGTGCTGCAGACTGATCACTTAAGCAGCA
AGCCTTTGCTTTTTCTTCGAGCGGAGAAGGAAGAGGATGAGTTGAGACTA
CATGTATTATGAAGCGTCTATGTGTTATTTACGGAGAGCGCGCAGCAGCA
CTACGGTGTGGTCCCGTGGTCCCGCCTATGAGAAACGCCTACTCTGAGCA
AGCCTGATAAACCTTATCGTGACACCGTCCTTGAACGACCTTGGCAGCGC
AGCCTGTTATAGCGGATTTAGTGTAGCGCTCGCCGCTGAGAACGATTTCT
TAATCCAATTTTCTTCAGCCCCCCCCTCCGTAAAGATATTTAATCATTAT
GTTTCTTATCAGGCTGTTTCTTATTGCGGTGTTTTGCAAATAATTCGGTT
GGATTGTCCTTGTTCTTGTTCTCTCTGTTTTGTTTATTGTTCTCAATTCA
GTTTTTTTTTTGTTTTAACCTCATACGATGTACCTTGTTTTGTTGTTTTG
TTCTTGTTCTTGTTTTTATCTTTTTCTTATTTTTTGTTTTGCAGGAGAGA
CGAACTTGAAGATCAGACAGGTGCAGAAGGTGCTCCTGGGGCGGGTCGAC
GGGCACAAGGACTTGGAATCCTTCAGCGGGAGAGTCACCATGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig12345:202..7896-

>mRNA_M-pyrifera_M_contig12345.4801.1 ID=mRNA_M-pyrifera_M_contig12345.4801.1|Name=mRNA_M-pyrifera_M_contig12345.4801.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1512bp|location=Sequence derived from alignment at M-pyrifera_M_contig12345:202..7896- (Macrocystis pyrifera P11B4 male)
AGGCGGAGGAAAAAGCAGGGGAACATTGTGAAGAGAGCCTGGAGGACGAT
TAGGGGGCAGCAGAACCCGCTCCCCGTCTCCAACCCCAGCAACTGGCCCA
ACCCCACCGTCAAAGACCTCACGGACCGACCCAACAGAGGCGGAGGAAAA
AGCAGGGGAACATTGTGAAGAGAGCCTGGAGGACGATTAGGGGGCAGCAG
AACCCGCTCCCCGTCTCCAACCCCAGCAACTGGCCCAACCCCACCGTCAA
AGACCTCACGGACCGACCCAACAGGACGGTTCAAGTCAACAGACCGCAGG
ATTTTTCTTTTTGCGACAACTTCATCAAGGACGGTTCAAGTCAACAGACC
GCAGGATTTTTCTTTTTGCGACAACTTCATCAAGACTTCGAAGTACGAGG
TCTGGTCTTTCATGCCGAAGTTCTTGGCGATGGAATTCCACCCACGGAAG
AAGATCGCCAACTTGTATTTCCTCATCGTCTCTTCCATGCAGGCAAGATG
TTCATGCACCCCAAGGACTTCGAAGTACGAGGTCTGGTCTTTCATGCCGA
AGTTCTTGGCGATGGAATTCCACCCACGGAAGAAGATCGCCAACTTGTAT
TTCCTCATCGTCTCTTCCATGCAGGCAAGATGTTCATGCACCCCAAGGGC
TATCCCGGCGATCACGAGCACCTTCGGCTACCCCATCTTGCTGGCCCCTC
TGCTGTTCATCGTCCTCATCGACATGGTCTTCACCATCATTGAGGCTATC
CCGGCGATCACGAGCACCTTCGGCTACCCCATCTTGCTGGCCCCTCTGCT
GTTCATCGTCCTCATCGACATGGTCTTCACCATCATTGAGGATGCGAGTC
GACACAAAGCGGACGCCTTAGCGAATGCCTCGCAGGCTGTAGTGTTGGAT
AAGGCGACGGGACAGTGGACCATCAAGGAGCGCTGGGAGGTAGCGGTGGG
AGACTTCGTCAAGGATGCGAGTCGACACAAAGCGGACGCCTTAGCGAATG
CCTCGCAGGCTGTAGTGTTGGATAAGGCGACGGGACAGTGGACCATCAAG
GAGCGCTGGGAGGTAGCGGTGGGAGACTTCGTCAAGGTGTACAACCGAGA
GGAAATACCGGCGGACATGCTCGTGGTCGGAGTTCACGAGAGGTACAGGC
CTAACTGTGCGGGGGTCTGCTACGTCGAGACCAAATCCCTGGACGGTGAG
CGTGTACAACCGAGAGGAAATACCGGCGGACATGCTCGTGGTCGGAGTTC
ACGAGAGGTACAGGCCTAACTGTGCGGGGGTCTGCTACGTCGAGACCAAA
TCCCTGGACGGTGAGCAGACGAACTTGAAGATCAGACAGGTGCAGAAGGT
GCTCCTGGGGCGGGTCGACGGGCACAAGGACTTGGAATCCTTCAGCGGGA
GAGTCACCATGTGAAGACGAACTTGAAGATCAGACAGGTGCAGAAGGTGC
TCCTGGGGCGGGTCGACGGGCACAAGGACTTGGAATCCTTCAGCGGGAGA
GTCACCATGTGA
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