prot_M-pyrifera_M_contig102236.480.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig102236.480.1
Unique Nameprot_M-pyrifera_M_contig102236.480.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length83
Homology
BLAST of mRNA_M-pyrifera_M_contig102236.480.1 vs. uniprot
Match: A0A6A5AU65_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AU65_9STRA)

HSP 1 Score: 113 bits (282), Expect = 8.650e-31
Identity = 56/82 (68.29%), Postives = 74/82 (90.24%), Query Frame = 0
Query:    2 RLTEELLRKKAEHHDGLLSELEEVSLHQLELERIEVVGDICRKLRILYLQNNIIFKIENLQHLKQLRYLNLALNNVRRIENL 83
            R+T ELLRK++EH++G++S LEE++LHQ E+E+IEV+G +CRKLRILYLQNNII KIE+L H+K LRYLNLALNN+++IE L
Sbjct:    6 RITLELLRKRSEHNEGMVSTLEEIALHQEEIEKIEVIGTLCRKLRILYLQNNIIEKIEDLTHMKDLRYLNLALNNIKKIEGL 87          
BLAST of mRNA_M-pyrifera_M_contig102236.480.1 vs. uniprot
Match: A0A6A3PUF8_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3PUF8_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.070e-30
Identity = 55/77 (71.43%), Postives = 71/77 (92.21%), Query Frame = 0
Query:    2 RLTEELLRKKAEHHDGLLSELEEVSLHQLELERIEVVGDICRKLRILYLQNNIIFKIENLQHLKQLRYLNLALNNVR 78
            R+T ELLRK+AEH++G++S LEE+SLHQ ELE+IEV+G +CRKLRILYLQNNII K+E+L H+K+LRYLN+ALNN+R
Sbjct:    3 RITVELLRKRAEHNEGIISSLEEISLHQEELEKIEVIGTLCRKLRILYLQNNIIDKMEDLTHMKELRYLNVALNNIR 79          
BLAST of mRNA_M-pyrifera_M_contig102236.480.1 vs. uniprot
Match: A0A662WUB0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUB0_9STRA)

HSP 1 Score: 114 bits (284), Expect = 7.500e-28
Identity = 57/82 (69.51%), Postives = 74/82 (90.24%), Query Frame = 0
Query:    2 RLTEELLRKKAEHHDGLLSELEEVSLHQLELERIEVVGDICRKLRILYLQNNIIFKIENLQHLKQLRYLNLALNNVRRIENL 83
            R+T ELLRK+AEH++G++S LEE+SLHQ ELE+IEV+G +CRKL+ILYLQNNII K+E+L H+K+LRYLNLALNN+ +IE L
Sbjct:    3 RITVELLRKRAEHNEGIISTLEEISLHQEELEKIEVIGTLCRKLQILYLQNNIIEKMEDLTHMKELRYLNLALNNISKIEGL 84          
BLAST of mRNA_M-pyrifera_M_contig102236.480.1 vs. uniprot
Match: A0A812V938_9DINO (LRRC6 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812V938_9DINO)

HSP 1 Score: 111 bits (278), Expect = 8.800e-27
Identity = 54/73 (73.97%), Postives = 68/73 (93.15%), Query Frame = 0
Query:    2 RLTEELLRKKAEHHDGLLSELEEVSLHQLELERIEVVGDICRKLRILYLQNNIIFKIENLQHLKQLRYLNLAL 74
            RLT EL+RKKAEHHDG++ +LEE+SLHQLELE++EV+G++CRKLRILYLQNNII +IEN+ +LK LRYLN+AL
Sbjct:  420 RLTAELVRKKAEHHDGIIGDLEEISLHQLELEKLEVIGELCRKLRILYLQNNIIPRIENIHYLKDLRYLNMAL 492          
BLAST of mRNA_M-pyrifera_M_contig102236.480.1 vs. uniprot
Match: A0A024GMQ1_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GMQ1_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.080e-26
Identity = 54/81 (66.67%), Postives = 73/81 (90.12%), Query Frame = 0
Query:    3 LTEELLRKKAEHHDGLLSELEEVSLHQLELERIEVVGDICRKLRILYLQNNIIFKIENLQHLKQLRYLNLALNNVRRIENL 83
            +T ELLRK+AEH++G+LS LEE+SLHQ E+E+I+++G +CRKLRI+YLQNNII ++ENL HLK LRYLNLALNN+++I+ L
Sbjct:    4 ITPELLRKRAEHNEGMLSTLEEISLHQEEIEKIDLIGTLCRKLRIVYLQNNIISEMENLIHLKDLRYLNLALNNIKQIKGL 84          
BLAST of mRNA_M-pyrifera_M_contig102236.480.1 vs. uniprot
Match: A0A6A3GCM2_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GCM2_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.440e-26
Identity = 52/74 (70.27%), Postives = 68/74 (91.89%), Query Frame = 0
Query:   10 KKAEHHDGLLSELEEVSLHQLELERIEVVGDICRKLRILYLQNNIIFKIENLQHLKQLRYLNLALNNVRRIENL 83
            K+AEH++G++S LEE+SLHQ ELE+IEV+G +CRKLRILYLQNNII K+E+L H+K+LRYLN+ALNN+R+IE L
Sbjct:    1 KRAEHNEGIISTLEEISLHQEELEKIEVIGTLCRKLRILYLQNNIIDKMEDLTHMKELRYLNVALNNIRKIEGL 74          
BLAST of mRNA_M-pyrifera_M_contig102236.480.1 vs. uniprot
Match: A0A7S3J1U7_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3J1U7_9SPIT)

HSP 1 Score: 99.8 bits (247), Expect = 1.830e-25
Identity = 51/81 (62.96%), Postives = 66/81 (81.48%), Query Frame = 0
Query:    3 LTEELLRKKAEHHDGLLSELEEVSLHQLELERIEVVGDICRKLRILYLQNNIIFKIENLQHLKQLRYLNLALNNVRRIENL 83
            +TEE LRKKAEH++G+LS LEE++LHQ  + +IE +   CR L+ILYLQNN+I KIEN+  LK+L YLNLA+NNVR+IE L
Sbjct:    7 ITEEFLRKKAEHNEGMLSNLEEITLHQHNITKIENIDKFCRHLKILYLQNNLIPKIENVHKLKELEYLNLAVNNVRKIEGL 87          
BLAST of mRNA_M-pyrifera_M_contig102236.480.1 vs. uniprot
Match: A0A2R5GEW5_9STRA (Protein tilB-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GEW5_9STRA)

HSP 1 Score: 106 bits (264), Expect = 3.360e-25
Identity = 50/83 (60.24%), Postives = 73/83 (87.95%), Query Frame = 0
Query:    1 MRLTEELLRKKAEHHDGLLSELEEVSLHQLELERIEVVGDICRKLRILYLQNNIIFKIENLQHLKQLRYLNLALNNVRRIENL 83
            +R+  EL+R+K+EH++G +++LEE++LHQLE+E+IE VG +CR+L+ILYLQNNII K+ENLQHLK+L YLN++ NN+ +IE L
Sbjct:    2 VRIDAELIRRKSEHNEGTMADLEEIALHQLEIEKIEKVGSLCRRLKILYLQNNIIGKLENLQHLKELEYLNVSQNNILKIEGL 84          
BLAST of mRNA_M-pyrifera_M_contig102236.480.1 vs. uniprot
Match: A0A3R7GRH2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GRH2_9STRA)

HSP 1 Score: 105 bits (261), Expect = 9.110e-25
Identity = 53/72 (73.61%), Postives = 66/72 (91.67%), Query Frame = 0
Query:    2 RLTEELLRKKAEHHDGLLSELEEVSLHQLELERIEVVGDICRKLRILYLQNNIIFKIENLQHLKQLRYLNLA 73
            R+T ELLRK+AEH++G++S LEE+SLHQ ELERIEV+G +CRKL+ILYLQNNII KIE+L H+K+LRYLNLA
Sbjct:    3 RITVELLRKRAEHNEGIISTLEEISLHQEELERIEVIGTLCRKLQILYLQNNIIEKIEDLAHMKELRYLNLA 74          
BLAST of mRNA_M-pyrifera_M_contig102236.480.1 vs. uniprot
Match: A0A7S0DUL2_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DUL2_9EUKA)

HSP 1 Score: 99.4 bits (246), Expect = 1.810e-24
Identity = 49/75 (65.33%), Postives = 65/75 (86.67%), Query Frame = 0
Query:    2 RLTEELLRKKAEHHDGLLSELEEVSLHQLELERIEVVGDICRKLRILYLQNNIIFKIENLQHLKQLRYLNLALNN 76
            R+T +L+RKK+EH+DG+L  LEE+SLHQL ++RIEV+G  C+ L+ILYLQNN+I KIENL+ +K+L YLNLALNN
Sbjct:   13 RITVDLIRKKSEHNDGILENLEEISLHQLNIQRIEVLGSCCKHLKILYLQNNLIPKIENLRKMKELVYLNLALNN 87          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102236.480.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A5AU65_9STRA8.650e-3168.29Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A6A3PUF8_9STRA1.070e-3071.43Uncharacterized protein (Fragment) n=2 Tax=Phytoph... [more]
A0A662WUB0_9STRA7.500e-2869.51Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A812V938_9DINO8.800e-2773.97LRRC6 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A024GMQ1_9STRA1.080e-2666.67Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A6A3GCM2_9STRA1.440e-2670.27Uncharacterized protein (Fragment) n=2 Tax=Phytoph... [more]
A0A7S3J1U7_9SPIT1.830e-2562.96Hypothetical protein (Fragment) n=1 Tax=Euplotes h... [more]
A0A2R5GEW5_9STRA3.360e-2560.24Protein tilB-like n=1 Tax=Hondaea fermentalgiana T... [more]
A0A3R7GRH2_9STRA9.110e-2573.61Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A7S0DUL2_9EUKA1.810e-2465.33Hypothetical protein (Fragment) n=2 Tax=Amorphochl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..83
e-value: 5.5E-11
score: 43.7
NoneNo IPR availablePANTHERPTHR18849LEUCINE RICH REPEAT PROTEINcoord: 2..83
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 18..82
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 44..65
score: 9.306
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 66..83
score: 7.312

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102236contigM-pyrifera_M_contig102236:398..646 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102236.480.1mRNA_M-pyrifera_M_contig102236.480.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig102236 398..646 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig102236.480.1 ID=prot_M-pyrifera_M_contig102236.480.1|Name=mRNA_M-pyrifera_M_contig102236.480.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=83bp
MRLTEELLRKKAEHHDGLLSELEEVSLHQLELERIEVVGDICRKLRILYL
QNNIIFKIENLQHLKQLRYLNLALNNVRRIENL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt