mRNA_M-pyrifera_M_contig123435.4798.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123435.4798.1 vs. uniprot
Match: A0A2E7KIE6_9PLAN (Uncharacterized protein n=4 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KIE6_9PLAN) HSP 1 Score: 306 bits (783), Expect = 5.210e-103 Identity = 150/154 (97.40%), Postives = 152/154 (98.70%), Query Frame = 1
Query: 1 MSNPEEEAEIDATPENIRIRAWAKKDPNTEWVHQDWDMEVAQAKYADLILSLVEEDCPQSDFFVSCLYLLVGSYFTTNGKSISRNQIDELLSQGEQSKNQNVQHWVNRSRAFLLNPEKFGRNSWAEGGWALDEHIWRLPDEERVAIIEEITAAF 462
MSNPEEEAEIDATPENIR AWAKKDPNTEWVHQDWDMEVAQAKYADLILSLVEEDCPQSDFFVSCLYLLVGSYFTTNGKSISRNQIDELLSQGEQSKNQNVQHWVNRSRAFLLNPEKFGR+SWAEGGWALDE+IWRLPDEERVAIIEEITAAF
Sbjct: 1 MSNPEEEAEIDATPENIR--AWAKKDPNTEWVHQDWDMEVAQAKYADLILSLVEEDCPQSDFFVSCLYLLVGSYFTTNGKSISRNQIDELLSQGEQSKNQNVQHWVNRSRAFLLNPEKFGRDSWAEGGWALDENIWRLPDEERVAIIEEITAAF 152
BLAST of mRNA_M-pyrifera_M_contig123435.4798.1 vs. uniprot
Match: A0A350KJB7_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KJB7_9PLAN) HSP 1 Score: 208 bits (530), Expect = 1.270e-64 Identity = 99/154 (64.29%), Postives = 125/154 (81.17%), Query Frame = 1
Query: 1 MSNPEEEAEIDATPENIRIRAWAKKDPNTEWVHQDWDMEVAQAKYADLILSLVEEDCPQSDFFVSCLYLLVGSYFTTNGKSISRNQIDELLSQGEQSKNQNVQHWVNRSRAFLLNPEKFGRNSWAEGGWALDEHIWRLPDEERVAIIEEITAAF 462
M++PE E E+ + ENI++ WA+K P+TEW HQDWDME+A +++ADLILSL EDCPQSDFFVSCLY+LVGS ++G SISR +ID+LL +GE+S N+NV HWV+RSRAFL NPE++ ++ W GGWALD+ IWR PDEERVAIIEEI AF
Sbjct: 1 MTDPEHEYEMGSILENIQV--WAQKTPDTEWPHQDWDMEMASSEHADLILSLTSEDCPQSDFFVSCLYILVGSCVASSGASISRAKIDDLLLKGEKSSNKNVLHWVDRSRAFLKNPEQYDQSIWTGGGWALDDEIWRYPDEERVAIIEEIIDAF 152
BLAST of mRNA_M-pyrifera_M_contig123435.4798.1 vs. uniprot
Match: UPI00118C89B9 (hypothetical protein n=1 Tax=Gimesia maris TaxID=122 RepID=UPI00118C89B9) HSP 1 Score: 187 bits (474), Expect = 2.070e-58 Identity = 86/138 (62.32%), Postives = 113/138 (81.88%), Query Frame = 1
Query: 1 MSNPEEEAEIDATPENIRIRAWAKKDPNTEWVHQDWDMEVAQAKYADLILSLVEEDCPQSDFFVSCLYLLVGSYFTTNGKSISRNQIDELLSQGEQSKNQNVQHWVNRSRAFLLNPEKFGRNSWAEGGWALDEHIWRL 414
M++PE E E+ +T ENI++ WA+K P+TEW HQDWDME+A +++ADLILSL E+C QSDFFVSCLY+LVGS ++G SISR +IDELL +GE+S N+NV HWVNRSRAFL NPE++ R++W +GGWALD+ IW +
Sbjct: 1 MTDPEHEYEMGSTLENIQV--WAEKAPDTEWPHQDWDMEMASSEHADLILSLTSENCSQSDFFVSCLYILVGSCVASSGASISRTKIDELLLEGEKSSNKNVLHWVNRSRAFLKNPEEYDRSTWIKGGWALDDEIWSI 136
BLAST of mRNA_M-pyrifera_M_contig123435.4798.1 vs. uniprot
Match: A0A8J6I944_9ACTN (Uncharacterized protein n=1 Tax=Sporichthya sp. TaxID=65475 RepID=A0A8J6I944_9ACTN) HSP 1 Score: 69.7 bits (169), Expect = 2.420e-12 Identity = 37/120 (30.83%), Postives = 63/120 (52.50%), Query Frame = 1
Query: 34 ATPENIRIRAWAKKDPNTEWVHQDWDMEVAQAKYADLILSLV-EEDCPQSDFFVSCLYLLVGSYFTTNGKSISRNQIDELLSQGEQSKNQNVQHWVNRSRAFLLNPEKFGRNSWAEGGWA 390
A P +RAWAK N +DWD+ +A +YAD+++ V E CP + ++ YLL G+ + ++R ++E+++ + N ++ WV RS + NP +F W GG+A
Sbjct: 12 ANPSPAELRAWAKC--NDLEPMEDWDLVLADLRYADVLVEQVANEACPSQRYLLAARYLLAGNAVRSGFTGLARADLEEVVATARATGNAWLEFWVARSEQLMANPAEFDYALWCAGGFA 129
BLAST of mRNA_M-pyrifera_M_contig123435.4798.1 vs. uniprot
Match: A0A5C6ET16_9BACT (Uncharacterized protein n=6 Tax=Rubripirellula TaxID=1579505 RepID=A0A5C6ET16_9BACT) HSP 1 Score: 63.2 bits (152), Expect = 7.400e-10 Identity = 37/113 (32.74%), Postives = 55/113 (48.67%), Query Frame = 1
Query: 40 PENIRIRAWAKKDPNTEWVHQDWDMEVAQAKYADLILSLVEE-DCPQSDFFVSCLYLLVGSYFT-TNGKSISRNQIDELLSQGEQSKNQNVQHWVNRSRAFLLNPEKFGRNSW 372
P + AW + T W QDWDM V DLIL+ + C Q +FFV CLY LVG + + G ++ +I+ELL+ + +++V W + + A F N W
Sbjct: 6 PSPSDVAAWVQLGIPTPWPDQDWDMYVCNGLNDDLILAYANDPSCIQREFFVHCLYQLVGDFTAWSTGNTVLGARIEELLANVDAKSHEDVSKWRDETIALRGGELSFDLNYW 118
BLAST of mRNA_M-pyrifera_M_contig123435.4798.1 vs. uniprot
Match: M2A681_9BACT (Uncharacterized protein n=2 Tax=Rhodopirellula TaxID=265488 RepID=M2A681_9BACT) HSP 1 Score: 60.8 bits (146), Expect = 9.880e-9 Identity = 40/130 (30.77%), Postives = 64/130 (49.23%), Query Frame = 1
Query: 10 PEEEAEIDATPENIR------IRAWAKKDPNTEWVHQDWDMEVAQAKYADLILSLVEED-CPQSDFFVSCLYLLVGSY--FTTNGKSISRNQIDELLSQGEQSKNQNVQHWVNRSRAFLLNPEKFGRNSW 372
P + E AT N+ + +W + T W QDWDM V DLIL+ + C Q +FFV CLY LVG + ++T ++ +I+ELL+ ++ + +V+ W + + A +F N W
Sbjct: 18 PNGQLEFTATKMNVYDPSPSDVASWVELGQPTPWPDQDWDMYVCNGLNDDLILAYANDPACIQREFFVHCLYQLVGDFTAWSTENADLAA-RIEELLANVDEKCHDDVRKWRDETIALRGGTMRFDLNYW 146 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123435.4798.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123435.4798.1 >prot_M-pyrifera_M_contig123435.4798.1 ID=prot_M-pyrifera_M_contig123435.4798.1|Name=mRNA_M-pyrifera_M_contig123435.4798.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=154bp MSNPEEEAEIDATPENIRIRAWAKKDPNTEWVHQDWDMEVAQAKYADLILback to top mRNA from alignment at M-pyrifera_M_contig123435:1..462- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123435.4798.1 ID=mRNA_M-pyrifera_M_contig123435.4798.1|Name=mRNA_M-pyrifera_M_contig123435.4798.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=462bp|location=Sequence derived from alignment at M-pyrifera_M_contig123435:1..462- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123435:1..462- >mRNA_M-pyrifera_M_contig123435.4798.1 ID=mRNA_M-pyrifera_M_contig123435.4798.1|Name=mRNA_M-pyrifera_M_contig123435.4798.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=924bp|location=Sequence derived from alignment at M-pyrifera_M_contig123435:1..462- (Macrocystis pyrifera P11B4 male)back to top |