mRNA_M-pyrifera_M_contig123413.4793.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123413.4793.1 vs. uniprot
Match: A0A5A8C265_CAFRO (Ricin B-type lectin domain-containing protein n=5 Tax=Sar TaxID=2698737 RepID=A0A5A8C265_CAFRO) HSP 1 Score: 145 bits (366), Expect = 1.490e-37 Identity = 80/153 (52.29%), Postives = 108/153 (70.59%), Query Frame = 1
Query: 4 YMEHLLGLARQYLGGEVVVYTTDGGSESYFSKGTLPGPSVYSAGD---GGDLSSIWAAEDAYNSAT--SPKMSTEWYVWWLTHWTDSHMANGSASNAASSLATLFNNSFGSVSIYMAHGGTNFGQWNGANGGGRAFQPVVTSYDYGAPLSEAG 447
YME+L+ ARQ+LG +V+YTTDGGS Y S+G+L G +VY+ GD G D S +AA+D +N + +E+Y WLTHW + HMAN S+S A ++ TLF+ + S+S+YM HGGTNFG++ GANGGG +F+P +TSYDY APLSE G
Sbjct: 208 YMEYLVKTARQHLGDNIVLYTTDGGSVGYMSRGSLNGSAVYTVGDFGPGTDPHSSFAAQDQFNPPPMRGAHLCSEFYSGWLTHWGE-HMANTSSSGLAKAMDTLFSLN-ASLSLYMGHGGTNFGRFAGANGGGSSFEPHITSYDYDAPLSEGG 358
BLAST of mRNA_M-pyrifera_M_contig123413.4793.1 vs. uniprot
Match: A0A1S3ZJ64_TOBAC (Beta-galactosidase n=5 Tax=Nicotiana TaxID=4085 RepID=A0A1S3ZJ64_TOBAC) HSP 1 Score: 125 bits (315), Expect = 3.350e-31 Identity = 72/155 (46.45%), Postives = 103/155 (66.45%), Query Frame = 1
Query: 1 AYMEHLLGLARQYLGGEVVVYTTDGGSESYFSKGTLPGPSVYSAGD---GGDLSSIWAAEDAYNS-ATSPKMSTEWYVWWLTHWTDSHMANGSASNAASSLATLFNNSFGSVSIYMAHGGTNFGQWNGANGGGRA--FQPVVTSYDYGAPLSEAG 447
AY+ HL +AR++LG +V++YTTDGGS +KGT+PG +V+SA D G D + + +N+ SP +STE+Y WLTHW + H+AN A+ A+ L + + + GS +YMAHGGTNFG +NGAN G ++P +TSYDY AP+ E+G
Sbjct: 19 AYLHHLARIARRHLGDDVILYTTDGGSRENLNKGTIPGDTVFSAVDFTTGDDPWPNFKLQKEFNAPGKSPPLSTEFYTGWLTHWGE-HIANTDATVTATYLERILSRN-GSAVLYMAHGGTNFGFYNGANTGADESDYKPDLTSYDYDAPIKESG 171
BLAST of mRNA_M-pyrifera_M_contig123413.4793.1 vs. uniprot
Match: UPI00073A0010 (beta-galactosidase 17 isoform X2 n=1 Tax=Solanum tuberosum TaxID=4113 RepID=UPI00073A0010) HSP 1 Score: 125 bits (315), Expect = 6.680e-31 Identity = 72/155 (46.45%), Postives = 104/155 (67.10%), Query Frame = 1
Query: 1 AYMEHLLGLARQYLGGEVVVYTTDGGSESYFSKGTLPGPSVYSAGD---GGDLSSIWAAEDAYNS-ATSPKMSTEWYVWWLTHWTDSHMANGSASNAASSLATLFNNSFGSVSIYMAHGGTNFGQWNGANGGGRA--FQPVVTSYDYGAPLSEAG 447
AY+ HL+ +AR++LG +V++YTTDGGS +KGT+PG +V+SA D G D + + +N+ SP +STE+Y WLTHW + H+AN A+ AS L + + + GS +YMAHGGTNFG ++GAN G ++P +TSYDY AP+ E+G
Sbjct: 243 AYLHHLVRIARRHLGDDVILYTTDGGSRENLNKGTIPGDAVFSAVDFSTGDDPWPNFKLQKEFNAPGKSPPLSTEFYTGWLTHWGE-HIANTDATVTASYLERILSKN-GSAVLYMAHGGTNFGFYSGANTGADETDYKPDLTSYDYDAPIKESG 395
BLAST of mRNA_M-pyrifera_M_contig123413.4793.1 vs. uniprot
Match: A0A0V0IS93_SOLCH (Beta-galactosidase n=2 Tax=Solanum TaxID=4107 RepID=A0A0V0IS93_SOLCH) HSP 1 Score: 125 bits (314), Expect = 7.850e-31 Identity = 72/155 (46.45%), Postives = 104/155 (67.10%), Query Frame = 1
Query: 1 AYMEHLLGLARQYLGGEVVVYTTDGGSESYFSKGTLPGPSVYSAGD---GGDLSSIWAAEDAYNS-ATSPKMSTEWYVWWLTHWTDSHMANGSASNAASSLATLFNNSFGSVSIYMAHGGTNFGQWNGANGGGRA--FQPVVTSYDYGAPLSEAG 447
AY+ HL+ +AR++LG +V++YTTDGGS +KGT+PG +V+SA D G D + + +N+ SP +STE+Y WLTHW + H+AN A+ AS L + + + GS +YMAHGGTNFG ++GAN G ++P +TSYDY AP+ E+G
Sbjct: 80 AYLHHLVRIARRHLGDDVILYTTDGGSRENLNKGTIPGDAVFSAVDFSTGDDPWPNFKLQKEFNAPGKSPPLSTEFYTGWLTHWGE-HIANTDATVTASYLDRILSKN-GSAVLYMAHGGTNFGFYSGANTGADETDYKPDLTSYDYDAPIKESG 232
BLAST of mRNA_M-pyrifera_M_contig123413.4793.1 vs. uniprot
Match: A0A314KN96_NICAT (Beta-galactosidase n=2 Tax=Nicotiana attenuata TaxID=49451 RepID=A0A314KN96_NICAT) HSP 1 Score: 124 bits (311), Expect = 3.620e-30 Identity = 71/155 (45.81%), Postives = 103/155 (66.45%), Query Frame = 1
Query: 1 AYMEHLLGLARQYLGGEVVVYTTDGGSESYFSKGTLPGPSVYSAGD---GGDLSSIWAAEDAYNS-ATSPKMSTEWYVWWLTHWTDSHMANGSASNAASSLATLFNNSFGSVSIYMAHGGTNFGQWNGANGGGRA--FQPVVTSYDYGAPLSEAG 447
AY+ HL +AR++LG +V++YTTDGGS +KGT+PG +V+SA D G D + + +N+ SP +STE+Y WLTHW + H+AN A+ A+ L + + + GS +YMAHGGTNFG ++GAN G ++P +TSYDY AP+ E+G
Sbjct: 232 AYLHHLARIARRHLGDDVILYTTDGGSRENLNKGTIPGDAVFSAVDFTTGDDPWPNFKLQKEFNAPGKSPPLSTEFYTGWLTHWGE-HIANTDATVTATCLERILSRN-GSAVLYMAHGGTNFGFYSGANTGADESDYKPDLTSYDYDAPIKESG 384
BLAST of mRNA_M-pyrifera_M_contig123413.4793.1 vs. uniprot
Match: A0A6J1B602_9ROSI (Beta-galactosidase n=1 Tax=Herrania umbratica TaxID=108875 RepID=A0A6J1B602_9ROSI) HSP 1 Score: 121 bits (303), Expect = 6.390e-30 Identity = 72/155 (46.45%), Postives = 101/155 (65.16%), Query Frame = 1
Query: 1 AYMEHLLGLARQYLGGEVVVYTTDGGSESYFSKGTLPGPSVYSAGD---GGDLSSIWAAEDAYNS-ATSPKMSTEWYVWWLTHWTDSHMANGSASNAASSLATLFNNSFGSVSIYMAHGGTNFGQWNGANGGGRA--FQPVVTSYDYGAPLSEAG 447
AY+ HL+ LAR +LG ++++YTTDGGS KGTL G V+SA D G D I+ + +NS SP +S+E+Y WLTHW + +A A A++L + + + GSV +YMAHGGTNFG +NGAN G ++P +TSYDY AP++E+G
Sbjct: 16 AYLRHLVKLARGHLGEDIILYTTDGGSRETLEKGTLGGDDVFSAVDFTTGDDPWPIFELQKEFNSPGKSPPLSSEFYTGWLTHWGEK-IARTDADFTAAALEKILSRN-GSVVLYMAHGGTNFGFYNGANTGADESDYKPDLTSYDYDAPITESG 168
BLAST of mRNA_M-pyrifera_M_contig123413.4793.1 vs. uniprot
Match: A0A0K9RGC9_SPIOL (Beta-galactosidase n=2 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RGC9_SPIOL) HSP 1 Score: 123 bits (309), Expect = 6.560e-30 Identity = 72/155 (46.45%), Postives = 101/155 (65.16%), Query Frame = 1
Query: 1 AYMEHLLGLARQYLGGEVVVYTTDGGSESYFSKGTLPGPSVYSAGD---GGDLSSIWAAEDAYNS-ATSPKMSTEWYVWWLTHWTDSHMANGSASNAASSLATLFNNSFGSVSIYMAHGGTNFGQWNGANGGG--RAFQPVVTSYDYGAPLSEAG 447
AY+ HL+ LAR++LG ++++YTTDGG+ KGT+PG SVYSA D G I+ + A+N+ SP +S+E+Y WLTHW + +A A A+ L + + + GSV +YMAHGGTNFG +NGAN G ++P +TSYDY AP+ E G
Sbjct: 208 AYLHHLVKLARRHLGDDIILYTTDGGTRVTLQKGTIPGDSVYSAVDFTTGDQPWPIFKLQKAFNAPGKSPPLSSEFYTGWLTHWGEK-IAKTDADFTAAELEKILSRN-GSVVLYMAHGGTNFGFYNGANTGSDDSDYKPDLTSYDYDAPIRETG 360
BLAST of mRNA_M-pyrifera_M_contig123413.4793.1 vs. uniprot
Match: A0A7J7DY18_TRIWF (Beta-galactosidase n=3 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7DY18_TRIWF) HSP 1 Score: 123 bits (309), Expect = 6.720e-30 Identity = 74/155 (47.74%), Postives = 99/155 (63.87%), Query Frame = 1
Query: 1 AYMEHLLGLARQYLGGEVVVYTTDGGSESYFSKGTLPGPSVYSAGD---GGDLSSIWAAEDAYNS-ATSPKMSTEWYVWWLTHWTDSHMANGSASNAASSLATLFNNSFGSVSIYMAHGGTNFGQWNGANGGGRA--FQPVVTSYDYGAPLSEAG 447
AY+ HL+ LARQ+LG V++YTTDGGS KGT+ G +V+SA D G D I+ + +NS SP +S E+Y WLTHW + +A AS AS+L + + + GS +YMAHGGTNFG +NGAN GG ++ +TSYDY AP+ E G
Sbjct: 220 AYLHHLVALARQHLGRNVILYTTDGGSRENLEKGTIRGDAVFSAVDFTTGDDPLPIFKLQKEFNSPGKSPSLSAEFYTGWLTHWGEK-IAQTDASFTASALQKILSQN-GSAVLYMAHGGTNFGFYNGANTGGTESNYKSDLTSYDYDAPIKENG 372
BLAST of mRNA_M-pyrifera_M_contig123413.4793.1 vs. uniprot
Match: A0A328E741_9ASTE (Beta-galactosidase n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328E741_9ASTE) HSP 1 Score: 123 bits (309), Expect = 6.770e-30 Identity = 70/155 (45.16%), Postives = 104/155 (67.10%), Query Frame = 1
Query: 1 AYMEHLLGLARQYLGGEVVVYTTDGGSESYFSKGTLPGPSVYSAGD---GGDLSSIWAAEDAYNS-ATSPKMSTEWYVWWLTHWTDSHMANGSASNAASSLATLFNNSFGSVSIYMAHGGTNFGQWNGANGGGRA--FQPVVTSYDYGAPLSEAG 447
AY+ HL+ LAR++LG +V++YTTDGG+ KGT+PG +V+S+ D G D +++ + +N+ SP +S+E+Y WLTHW + +AN + ASSL + + GSV +YMAHGGTNFG ++GAN G ++P +TSYDY AP+ E+G
Sbjct: 214 AYLHHLVRLARRHLGDDVILYTTDGGTRENLEKGTIPGDAVFSSVDFSTGDDPWAVFKLQKEFNAPGKSPPLSSEFYTGWLTHWGEK-VANTDSDFTASSLENILAGN-GSVVLYMAHGGTNFGFYSGANTGSDESDYKPDLTSYDYDAPIKESG 366
BLAST of mRNA_M-pyrifera_M_contig123413.4793.1 vs. uniprot
Match: A0A1R3HKH2_COCAP (Beta-galactosidase n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3HKH2_COCAP) HSP 1 Score: 123 bits (309), Expect = 7.250e-30 Identity = 73/155 (47.10%), Postives = 102/155 (65.81%), Query Frame = 1
Query: 1 AYMEHLLGLARQYLGGEVVVYTTDGGSESYFSKGTLPGPSVYSAGD---GGDLSSIWAAEDAYNS-ATSPKMSTEWYVWWLTHWTDSHMANGSASNAASSLATLFNNSFGSVSIYMAHGGTNFGQWNGANGGGRA--FQPVVTSYDYGAPLSEAG 447
AY+ HL+ LAR +LG ++++YTTDGG+ KGT+ G V+SA D G D SI+ + +NS SP +S E+Y WLTHW + +A AS A++L + + + GSV +YMAHGGTNFG +NGAN G ++P +TSYDY AP+SE+G
Sbjct: 238 AYLRHLVKLARGHLGEDIILYTTDGGTRETLEKGTIQGADVFSAVDFTTGDDAWSIFKLQKEFNSPGKSPPLSAEFYTGWLTHWGEK-IARTDASFTAAALEKIVSRN-GSVVLYMAHGGTNFGFYNGANTGVDVSDYKPDLTSYDYDAPISESG 390 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123413.4793.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123413.4793.1 >prot_M-pyrifera_M_contig123413.4793.1 ID=prot_M-pyrifera_M_contig123413.4793.1|Name=mRNA_M-pyrifera_M_contig123413.4793.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=147bp MEHLLGLARQYLGGEVVVYTTDGGSESYFSKGTLPGPSVYSAGDGGDLSSback to top mRNA from alignment at M-pyrifera_M_contig123413:76..522- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123413.4793.1 ID=mRNA_M-pyrifera_M_contig123413.4793.1|Name=mRNA_M-pyrifera_M_contig123413.4793.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=447bp|location=Sequence derived from alignment at M-pyrifera_M_contig123413:76..522- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123413:76..522- >mRNA_M-pyrifera_M_contig123413.4793.1 ID=mRNA_M-pyrifera_M_contig123413.4793.1|Name=mRNA_M-pyrifera_M_contig123413.4793.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=882bp|location=Sequence derived from alignment at M-pyrifera_M_contig123413:76..522- (Macrocystis pyrifera P11B4 male)back to top |