mRNA_M-pyrifera_M_contig12340.4789.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12340.4789.1
Unique NamemRNA_M-pyrifera_M_contig12340.4789.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Match: D7FQR5_ECTSI (FAD binding / catalytic/ tRNA dihydrouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR5_ECTSI)

HSP 1 Score: 677 bits (1746), Expect = 1.080e-241
Identity = 349/476 (73.32%), Postives = 388/476 (81.51%), Query Frame = 1
Query:    1 MMRLTAMSVSALAVMHSTRSFVLPFKAPSAPMTLCLTRARCQRISSRTHPA-------RSTAEVTQVGAG----SPSPIMGRGREVFSLAPMMEYTDRHMRFLLRLLTKRTVLWTEMVPSPTITHNSDDLARFLDYNEGVEHPVVLQIGGSDTTIVSEACRLARPYNYDAINLNCGCPSEKVAGKGAFGAALMRSPSHVKDLCLAMRDGAGEETPITVKCRIGVDDDDSYEQLAAFVDEVYRGAGVTHFIIHARKAILGGLSPAENRSIPPLRHDFVYRLVKDFPDVDFTLNGGINTYEEVRVALSCLEQGAHGVMVGRSWSSKPWYWSQADSKFFGTKDPGLNRREVLETYAEYGERQEKAYGGQWLACRRRLAKPVWHLFHGEKNGKKFRVALESLLREERPFGEILEKSLQTLSQEQVDRLPGQSWDPRGSQEEKNV-ESLAVDPGCVS-VP----RGVPDGRFRDGRMYYTD 1377
            MM+L +MS+SAL V+HS R+F  P   PS    L   RAR  R ++   P        +     T++ AG    SP   +GRGREVFSLAPMMEYTDRHMR+LLRLLT RTVLWTEMVPS TI HN DDL RFLDYNE VEHPVVLQIGGSDTT V EACRLARPY YDAINLNCGCPSEKVAGKGAFGAALMRSPS VKDLCLAM+DGAGE+TPITVKCRIGVD+DDSYEQLAAFV+EV RGAGV HFI+HARKAILGGLSPA+NR+IPPL++DFVYRLVKDFPDVDFTLNGG+NTYEE   A+SCLEQGAHGVMVGRSWSS PWYWSQADS  FG KDPGL RREVLE YAEYGERQEKA G +WLACRRRLAKP+WH+FHGEK GKKFRVALE +LRE++ FGEI++KSL  + Q+QVD LPG++W  R ++E     ESLA DPGCVS +P    RGVPDGRFRDGR+ Y D
Sbjct:    1 MMKLKSMSLSALVVVHSARAF--PLAIPSQHQGL---RARRCRHTAAAPPVDHWETDGKKHGRRTRMEAGAAPDSPPSALGRGREVFSLAPMMEYTDRHMRYLLRLLTTRTVLWTEMVPSSTIIHNPDDLGRFLDYNEEVEHPVVLQIGGSDTTDVREACRLARPYKYDAINLNCGCPSEKVAGKGAFGAALMRSPSLVKDLCLAMKDGAGEDTPITVKCRIGVDNDDSYEQLAAFVEEVSRGAGVPHFIVHARKAILGGLSPAQNRNIPPLKYDFVYRLVKDFPDVDFTLNGGVNTYEE---AVSCLEQGAHGVMVGRSWSSNPWYWSQADSMLFGAKDPGLTRREVLERYAEYGERQEKACGEKWLACRRRLAKPIWHMFHGEKGGKKFRVALEGMLREDKSFGEIVQKSLLAMPQDQVDWLPGENWRARQAEEGAGQGESLAQDPGCVSSLPSPSSRGVPDGRFRDGRLLYID 468          
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Match: A0A836CCW1_9STRA (tRNA-dihydrouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCW1_9STRA)

HSP 1 Score: 440 bits (1132), Expect = 5.480e-150
Identity = 213/347 (61.38%), Postives = 260/347 (74.93%), Query Frame = 1
Query:  205 MGRGREVFSLAPMMEYTDRHMRFLLRLLTKRTVLWTEMVPSPTITHNSDDLARFLDYNEGVEHPVVLQIGGSDTTIVSEACRLARPYNYDAINLNCGCPSEKVAGKGAFGAALMRSPSHVKDLCLAMRDGAGEETPITVKCRIGVDDDDSYEQLAAFVDEVYRGAGVTHFIIHARKAILGGLSPAENRSIPPLRHDFVYRLVKDFPDVDFTLNGGINTYEEVRVALSCLEQGAHGVMVGRSWSSKPWYWSQADSKFFGTKDPGLNRREVLETYAEYGERQEKAYGGQWLACRRRLAKPVWHLFHGEKNGKKFRVALESLLREERPFGEILEKSLQTLSQEQVDRLPG 1245
            + R  +  SLAPMMEYTDRHMR++LRL TK+ V+WTEM+P  +I HN+DDL R L Y++  EHPVVLQ+GGSD  +V  AC LARPY YD INLN GCPSE+VAGKGAFGAALMR P  V D+C AMR+G+G     +VKCRIGVDD+DSY  LA FVD V RG GV+ FI+HARKAIL GLSP +NR +PPL++D+VYRLV+DFP++ FTLNGG+ TY  V+ AL   + GAHGVMVGR+   +PWYWSQ+DS+ FG  D  LNRR+VL+TY EY E  E   G +WL  RRRL KPVW+LFHGE  GKKFR  L+ ++ +ERPF  I+  +LQ L  + VD  PG
Sbjct:    3 LSRHDQRLSLAPMMEYTDRHMRYMLRLYTKKMVMWTEMIPIGSIVHNADDLDRILGYDQSCEHPVVLQLGGSDPELVRTACELARPYQYDQINLNVGCPSERVAGKGAFGAALMREPRLVADICAAMREGSGG-AQTSVKCRIGVDDEDSYASLARFVDVVARGGGVSDFIVHARKAILKGLSPEQNRKVPPLKYDYVYRLVRDFPELSFTLNGGVTTYAGVQEAL---DGGAHGVMVGRAVLERPWYWSQSDSRVFGATDAALNRRQVLQTYFEYAEGVEAEAGARWLTYRRRLLKPVWNLFHGEPGGKKFRARLDGMITQERPFHAIINDALQELPPDVVDAPPG 345          
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Match: A0A4D9D156_9STRA (tRNA-dihydrouridine synthase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D156_9STRA)

HSP 1 Score: 379 bits (972), Expect = 1.080e-125
Identity = 193/350 (55.14%), Postives = 253/350 (72.29%), Query Frame = 1
Query:  220 EVFSLAPMMEYTDRHMRFLLRLLTKRTVLWTEMVPSPTITHNSDDLARFLDYNEGVEHPVVLQIGGSDTTIVSEACRLARPYNYDAINLNCGCPSEKVAGKGAFGAALMRSPSHVKDLCLAMRDGAGEETPITVKCRIGVDDDDSYEQLAAFVDEVYRGAGVTHFIIHARKAILGGLSPAENRSIPPLRHDFVYRLVKDFPDVDFTLNGGINTYEEVRVALSCLEQGAHGVMVGRSWSSKPWYWSQADSKFFGTKD--PGLNRREVLETYAEYGERQEKAYGGQWLACRRRLAKPVWHLFHGEKNGKKFRVALE-SLLREERPFGEILEKSLQTLSQEQVDRLPGQSWDP 1260
            E  SLAPMMEYTDRH+RFLLRLL+KR VL+TEM+ +PT+ HN +   RFL +N   EHPVVLQ+GGSD   ++EA RLA PY Y+A+NLNCGCPSE+V+GKG FGAALMR P  V +LC AM +G+  + P+TVKCRIGVDDDDSYEQLA FV+ V   + V HF++HARKAILGGLSP +NR +PPL++ FVYRL ++FP + FTLNGG+ +YE+V      L +G HGVM+GR+  ++P+YWS  D++ FG+ D  PGL RREVL+ Y  Y + +E+A GG  +  RR L KPV +LF GE  GK+FR  L+ +LL       ++LE++   +    ++ LPG +  P
Sbjct:   23 ERVSLAPMMEYTDRHLRFLLRLLSKRMVLYTEMITAPTLYHNEESRDRFLRFNSPAEHPVVLQLGGSDPGQLAEASRLASPYKYNAMNLNCGCPSERVSGKGCFGAALMREPERVAELCTAMSEGSRGKIPVTVKCRIGVDDDDSYEQLAHFVETVSGASPVRHFLVHARKAILGGLSPDQNRRVPPLKYPFVYRLSREFPHLRFTLNGGVLSYEDV---AEHLREGVHGVMIGRAVVARPFYWSDVDARVFGSADGNPGLTRREVLDRYGAYAQ-EEEARGGPRM--RRLLIKPVHNLFAGEPMGKRFRATLDQALLEPSLDVRQVLERATAVMPAALLEVLPGSAAIP 366          
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Match: A0A7S3USD9_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USD9_HETAK)

HSP 1 Score: 377 bits (967), Expect = 3.590e-124
Identity = 194/371 (52.29%), Postives = 255/371 (68.73%), Query Frame = 1
Query:  142 THPARSTAEVTQVGAGSPSPIMGRG-REVFSLAPMMEYTDRHMRFLLRLLTKRTVLWTEMVPSPTITHNSD-DLARFLDYNEGVEHPVVLQIGGSDTTIVSEACRLARPYNYDAINLNCGCPSEKVAGKGAFGAALMRSPSHVKDLCLAMRDGAGEETPITVKCRIGVDDDDSYEQLAAFVDEVYRGAGVTHFIIHARKAILGGLSPAENRSIPPLRHDFVYRLVKDFPDVDFTLNGGINTYEEVRVALSCLEQGAHGVMVGRSWSSKPWYWSQADSKFFGTKDPGLNRREVLETYAEYGERQEKAYGGQWLACRRRLAKPVWHLFHGEKNGKKFRVALESLLREERPFGEILEKSLQTLSQEQVDRLPGQ 1248
            T P  S+ ++T    GS    +  G +E+FSLAPMM+YTDRHMRFL+RLL+K  VL+TEM+ S TI +N + +L R+LDY+E  EHPVVLQ+GGSD   +  A   A PY YDA+NLNCGCPSEKVAGKG FGAALMR    V DLC  M   A  + P+TVK RIGVDD+DSYE L  F++ V   + V HFI+HAR AILGGLSPA+NR IPPL++D+VY LVKD+P+  FT+NGGI  YEE+R  L    +G HGVMVGR+ ++ P+ WSQ D   +G  +PGL RRE+LE Y EY +   + +G +    R+ L K + + F G++NGKKFR A++ L+R E P  ++   + + L+ E +D  PG+
Sbjct:   23 TKPTPSSMQMTSTDGGSYKTSLRNGQKELFSLAPMMDYTDRHMRFLMRLLSKDMVLYTEMIASGTIVNNPENELGRWLDYSESCEHPVVLQLGGSDPGELRRAAARAAPYRYDAVNLNCGCPSEKVAGKGCFGAALMREAELVGDLCRGM--AAELDCPVTVKSRIGVDDEDSYEGLCNFIETVADRSPVRHFIVHARTAILGGLSPAQNRQIPPLKYDYVYNLVKDYPEFQFTINGGITEYEEIREHLG---RGVHGVMVGRAINADPYKWSQVDELVYGAANPGLTRREILERYGEYCDEMVELWGPR---VRQTLKKHILNFFVGQRNGKKFRCAMDKLVRTELPLSKVFSNAAEILTDETLDAKPGE 385          
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Match: A0A7S2C7I3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C7I3_9STRA)

HSP 1 Score: 332 bits (850), Expect = 1.730e-106
Identity = 181/349 (51.86%), Postives = 234/349 (67.05%), Query Frame = 1
Query:  226 FSLAPMMEYTDRHMRFLLRLLTKRTVLWTEMVPSPTITHNSDDLARFLDYNEGVEHPVVLQIGGSDTTIVSEACRLARPYNYDAINLNCGCPSEKVAGKGAFGAALMRSPSHVKDLCLAMRDGAGEETPITVKCRIGVDDDDSYEQLAAFVDEVYRGAGVTHFIIHARKAILGGLSPAENRSIPPLRHDFVYRLVKDFPDVDFTLNGGINTYEEVRVALSCLEQGAHGVMVGRSWSSKPWYWSQADSKFFGTKDPGL-NRREVLETYAEYGERQ-------EKAYGGQWLACRRRLAKPVWHLFHGEKNGKKFRVALESLLREE-RPFGEILEKSLQTLSQEQVDRLPG 1245
            FS+APMM+YTDRH R+LLRLL+ + VL+TEMV + T+ HN D + R+L  ++ VE+PVVLQ+GGSD   +  + + A  YNYD INLNCGCPS+KVAGKG+FGA LM     V  LC AM    G+  PITVKCRIGVDD DSYEQLA FV  V +  GV HFI+HARKAILGGLSP ENR IPP+++D VY+LV DFP + F++NG + TYE+V   LS   +G HGVMVGRS   +PW WS+ DS+ +G     + +RR+VLE YA+Y E++       +  Y  +    +R + +   +LF GE NG+KFRV L+  L    R   EIL+ +   L  E +D  PG
Sbjct:   76 FSVAPMMDYTDRHFRYLLRLLSSKAVLYTEMVGASTLVHNPD-IDRWLRLSDDVENPVVLQLGGSDCEDLRTSVKRASAYNYDEINLNCGCPSDKVAGKGSFGATLMLDAKRVGQLCDAMAQECGK--PITVKCRIGVDDQDSYEQLAEFVGTVSQTGGVEHFIVHARKAILGGLSPEENRRIPPIKYDHVYQLVADFPSLRFSMNGEVKTYEDVSEHLS---RGLHGVMVGRSVIEQPWLWSEVDSRIYGLASDNVPSRRKVLEAYADYAEQEISRMLIKDPKYAPR---LKRAILRHTANLFRGEPNGRKFRVVLDQQLNTPGRSPHEILQTASGALFPETLDAGPG 415          
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Match: A0A2V3IQ37_9FLOR (tRNA-dihydrouridine(20/20a) synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ37_9FLOR)

HSP 1 Score: 306 bits (785), Expect = 9.510e-98
Identity = 168/362 (46.41%), Postives = 229/362 (63.26%), Query Frame = 1
Query:  244 MEYTDRHMRFLLRLLTKRTVLWTEMVPSPTITHNSDDLARFLDYNE-GVEHPVVLQIGGSDTTIVSEACRLARPYNYDAINLNCGCPSEKVAGKGAFGAALMRSPSHVKDLCLAMRDGAGEETPITVKCRIGVDDDDSYEQLAAFVDEVYRGAGVTHFIIHARKAILGGLSPAENRSIPPLRHDFVYRLVKDFPDVDFTLNGGINTYEEVRVALSCLEQGAHGVMVGRSWSSKPWY-WSQADSKFFGTKDPGLNRREVLETYAEYGERQEKAYGGQWLACRRRLAKPVWHLFHGEKNGKKFRVALESLLREERPFGEILEKSLQTLSQEQVDRLPGQSWDP-RGSQEEKNVESLAVDPGCVS 1320
            ME TDRH R L RL+++R  L+TEMV   T+ HN    +  L+  +   + PVVLQ+GGSD   +  A R A  + YD +NLNCGCPS KVAGKG FGAALMR P  V D C  MR+   E  P+TVKCRIGVD+DDSY+QL  FV  V    GV+HFI+HARKAILGGLSPA+NR+IPPLR+  VY L++DFP + F++NGG++T E+V   L   ++G +GVM+GR+  ++PW+     D   +G     + RR VLE Y EY +R+      +     R L +P+ +LFHGEKNGKK+R  ++  L+   PF  IL ++L  L    +D +P     P + +++E  V +++    CVS
Sbjct:    1 MEVTDRHFRALARLISRRATLYTEMVVDRTLIHNERLRSLSLELPDLPAQQPVVLQLGGSDPAELECAARYAAQHGYDEVNLNCGCPSPKVAGKGCFGAALMREPHLVADACRRMREVLPEHVPVTVKCRIGVDNDDSYQQLCDFVSVVSERGGVSHFIVHARKAILGGLSPAQNRTIPPLRYQVVYDLIRDFPHLSFSINGGLHTVEDVNEQL---KRGVYGVMIGRAVMNRPWHALCDVDHAVYGD-GVVITRRGVLERYVEYAKRETS----RTCCSSRVLFRPLLNLFHGEKNGKKYRRLIDEGLKRNEPFERILREALDVLPSSVLDAIPPSLSAPAQATEKEHGVTAVS----CVS 350          
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Match: A0A7S0D9F4_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D9F4_9EUKA)

HSP 1 Score: 306 bits (785), Expect = 1.270e-96
Identity = 161/349 (46.13%), Postives = 226/349 (64.76%), Query Frame = 1
Query:  196 SPIMGRGREVFSLAPMMEYTDRHMRFLLRLLTKRTVLWTEMVPSPTITHNSDDLARFLDYNEGVEHPVVLQIGGSDTTIVSEACRLARPYNYDAINLNCGCPSEKVAGKGAFGAALMRSPSHVKDLCLAM-RDGAGEETPITVKCRIGVDDDDSYEQLAAFVDEVYRGAGVTHFIIHARKAILG-GLSPAENRSIPPLRHDFVYRLVKDFPDVDFTLNGGINTYEEVRVALSCLEQGAHGVMVGRSWSSKPWYWSQADSKFFGTKDPGLNRREVLETYAEYGERQEKAYGGQWLACRRRLAKPVWHLFHGEKNGKKFRVALESLLREERPFGEILEKSLQTLSQEQVDR 1236
            SP +  G E FS+APMM+YTDRH RFLLR++TK+  L+TEM+ S  + H   D  R L Y++ +EHPV LQ+GGSD   +++  + A PY YDAINLNCGCPS+KV+G+G+FGAALM+ P +   LC +M +  A  +TP++VKCRIGVD++D Y  L  FV  +    GV HFIIHARKAIL   LSP +NR IPPL++ +V+RLV DFP   F LNGG+ + EE   A   L+ G  GVMVGR   ++PWYW   D + FG ++P L+RRE+L  Y+ Y   + +      ++    + KPV HLF GE+  + +R  +  L  ++    EIL+ ++  +  + +D+
Sbjct:   97 SPPLALG-ERFSVAPMMDYTDRHFRFLLRMITKKAWLYTEMITSEALIHGDAD--RLLRYHDPIEHPVALQLGGSDPDSLAKGVKKALPYAYDAINLNCGCPSDKVSGRGSFGAALMKEPDYTAVLCESMIQQAAATDTPVSVKCRIGVDENDDYHYLKQFVTAL-GDVGVRHFIIHARKAILNMNLSPKQNREIPPLKYQYVHRLVVDFPSYSFVLNGGVKSLEE---ADEFLKAGVAGVMVGREIINRPWYWGDVDRRLFGVENPRLSRREILGNYSAYAVVEMERDPRLGIST---VLKPVQHLFVGERGARAYRRTIAELSAKKVAVDEILKAAINCIGDQDLDQ 435          
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Match: A0A0G4ELS3_VITBC (tRNA-dihydrouridine synthase n=2 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ELS3_VITBC)

HSP 1 Score: 305 bits (780), Expect = 1.850e-96
Identity = 169/354 (47.74%), Postives = 230/354 (64.97%), Query Frame = 1
Query:  226 FSLAPMMEYTDRHMRFLLRLLTKRTVLWTEMVPSPTITHNSDDLA----------RFLDYN-EGVEHPVVLQIGGSDTTIVSEACRLARPYN-YDAINLNCGCPSEKVAGKGAFGAALMRSPSHVKDLCLAMRDGAGEETPITVKCRIGVDDDDSYEQLAAFVDEVYRGAGVTHFIIHARKAILGGLSPAENRSIPPLRHDFVYRLVKDFPDVDFTLNGGINTYEEVRVALSCLEQGAHGVMVGRSWSSKPWYWSQADSKFFGTKDPGLNRREVLETYAEYGERQ-EKAYGGQWLACRRRLAKPVWHLFHGEKNGKKFRVALESLL-REERPFGEILEKSLQTLSQEQVDRLPG 1245
            FS+APMM+YTD+H RFL+RLLT+   L+TEM+ +  + + +   A          R L  N E +E P VLQ+GGSD  +++EA R A  Y+ +  +NLNCGCPSE+VAGKGAFGAALMR P+ V +LC AMR G G   P TVKCRIGVDD DS+E+L  F+  V   AGV+HFIIH+RKAIL GLSP +NR IPPL +++VYRLV+ FP + FTLNGG+ TYE++ +          GVMVGR+   +P+YWS+ DS+ +G  + GLNRREVL  Y  Y + + E+    +  + R  L K   +LF GE   +K++  LE+L  R +     IL ++ + L +  ++R PG
Sbjct:   21 FSVAPMMDYTDKHFRFLMRLLTRNATLYTEMMAANALHYTNRQAAADATADSMIPRSLATNAESIESPCVLQLGGSDPDVLAEASRTASAYHPFTELNLNCGCPSERVAGKGAFGAALMREPALVAELCKAMRQGGGR--PTTVKCRIGVDDQDSFEELQRFISTVAERAGVSHFIIHSRKAILTGLSPEQNRKIPPLIYEYVYRLVEGFPGLRFTLNGGVLTYEDIDMHFERCPT-LTGVMVGRAVLDRPFYWSEVDSRLYGRDNLGLNRREVLAAYGSYCDAEMERTDPSRQRSLRNLLLKHALNLFAGEPMSRKYKQRLEALRQRGDVSVSAILREAEEQLHEGVLERRPG 371          
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Match: K3Y7H3_SETIT (Dus domain-containing protein n=6 Tax=Paniceae TaxID=147428 RepID=K3Y7H3_SETIT)

HSP 1 Score: 302 bits (774), Expect = 4.430e-95
Identity = 175/418 (41.87%), Postives = 246/418 (58.85%), Query Frame = 1
Query:   79 APSAPMTLCLTRARCQRISSRTHPARSTAEVTQVGAGSPSPIMGRGREVFSLAPMMEYTDRHMRFLLRLLTKRTVLWTEMVPSPTITHNSDDLARFLDYNEGVEHPVVLQIGGSDTTIVSEACRLARPYNYDAINLNCGCPSEKVAGKGAFGAALMRSPSHVKDLCLAMRDGAGEETPITVKCRIGVDDDDSYEQLAAFVDEVYRGAGVTHFIIHARKAILGGLSPAENRSIPPLRHDFVYRLVKDFPDVDFTLNGGINTYEEVRVALSCLEQGAHGVMVGRSWSSKPWYW-SQADSKFFGTKDPGLNRREVLETYAEYGERQEKAYGGQWLACRRRLAKPVWHLFHGEKNGKKFRVALESLLREERPFGEILEKSLQTLSQEQVDRLPGQSWDPRGSQEEKNVESLAVDPGCVSVPR 1329
            AP +P      R R   +S    P R+ +  +   AG   P +      FS+APMM++TD H R L RL+++   L+TEMV + TI H  D+L RFL + E  +HP+VLQIGGS+   +++A  LA  Y+YD INLNCGCPS KVAG G FGA LM  P  V D   A+   A  + P++VKCRIGVDD DSYE+L  FVD+V   +   HFIIHARKA+L G+SPAENR +PPL++++ + L++DFP+V FTLNGGI T ++V  ++    QGA GVMVGRS  + PW      DS+ +G     ++RR++LE+Y  YG+     YG      R+ L KP+ HLFH E     ++   +S LR          K++++  +E +D +P    D   ++E+   +    D   +  PR
Sbjct:   17 APGSPGAFL--RGRFSPLSPGARPCRAASSASVPAAGKHLPPL------FSVAPMMDWTDNHYRTLARLISRHAWLYTEMVVAETIVHQKDNLDRFLAFPEE-QHPIVLQIGGSNLKNLAKATELANAYSYDEINLNCGCPSGKVAGHGCFGARLMFDPEFVGDAMSAI--AANCDVPVSVKCRIGVDDCDSYEELCDFVDKVVSNSPTRHFIIHARKALLSGISPAENRKVPPLKYEYYFALLRDFPEVKFTLNGGITTIDQVSASI---RQGAQGVMVGRSAYNNPWNMLGHVDSEIYGKPTRCISRRQILESYQFYGDSIIGRYGPSRPNVRQ-LVKPLLHLFHSEPGNNLWKRKSDSALR--------YCKTVKSFLEETLDAIPDTVLDKPVTREQSVEKKYFADVDSLLPPR 411          
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Match: A0A1E5VB94_9POAL (tRNA-dihydrouridine(20/20a) synthase n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5VB94_9POAL)

HSP 1 Score: 302 bits (774), Expect = 4.430e-95
Identity = 169/386 (43.78%), Postives = 238/386 (61.66%), Query Frame = 1
Query:   82 PSAPMTLCLTRARCQRISSRTHPARSTAEVTQVGAGSPSPIMGRGREVFSLAPMMEYTDRHMRFLLRLLTKRTVLWTEMVPSPTITHNSDDLARFLDYNEGVEHPVVLQIGGSDTTIVSEACRLARPYNYDAINLNCGCPSEKVAGKGAFGAALMRSPSHVKDLCLAMRDGAGEETPITVKCRIGVDDDDSYEQLAAFVDEVYRGAGVTHFIIHARKAILGGLSPAENRSIPPLRHDFVYRLVKDFPDVDFTLNGGINTYEEVRVALSCLEQGAHGVMVGRSWSSKPWYW-SQADSKFFGTKDPGLNRREVLETYAEYGERQEKAYGGQWLACRRRLAKPVWHLFHGEKNGKKFRVALESLLREERPFGEILEKSLQTLSQEQVDR 1236
            P +P T    R R    + R+ P R+ +  +   AG   P +      FS+APMM++TD H R L RL+++   L+TEMV + TI H  ++L RFL + E  +HP+VLQIGGS+   +++A  LA  Y+YD INLNCGCPS +VAG G FGA LM  P  V D   A+   A  + P++VKCRIGVDD DSYE+L  FV +V   +  +HFIIHARKA+L GLSPAENR++PPL++++ + L++DFP+V FTLNGGI T ++V  ++    QGAHGVMVGR+  + PW      D + +G     ++RRE+LE+Y  YG+     YG      R+ L KP+ HLFH E     ++   +S LR  +     LE++L T+    +D+
Sbjct:   18 PGSPGTFL--RGRFSPRTPRSLPCRAASSASAPAAGKHLPPL------FSVAPMMDWTDNHYRTLARLISRHAWLYTEMVVAETIVHQKNNLDRFLAFPEE-QHPIVLQIGGSNLENLAKATELANAYSYDEINLNCGCPSGRVAGHGCFGARLMFDPEFVGDAMSAI--AANCDVPVSVKCRIGVDDRDSYEELCEFVHKVVSKSPTSHFIIHARKALLSGLSPAENRTVPPLKYEYYFALLRDFPEVKFTLNGGITTVDQVSASI---RQGAHGVMVGRAAYNNPWNMLGHVDGEIYGKPTRCISRREILESYQVYGDSIIGQYGPSRPNVRQ-LVKPLLHLFHSEPGNNLWKRKADSALRYCKTVKSFLEETLDTIPDSVLDK 388          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12340.4789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQR5_ECTSI1.080e-24173.32FAD binding / catalytic/ tRNA dihydrouridine synth... [more]
A0A836CCW1_9STRA5.480e-15061.38tRNA-dihydrouridine synthase n=1 Tax=Tribonema min... [more]
A0A4D9D156_9STRA1.080e-12555.14tRNA-dihydrouridine synthase n=3 Tax=Monodopsidace... [more]
A0A7S3USD9_HETAK3.590e-12452.29Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
A0A7S2C7I3_9STRA1.730e-10651.86Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A2V3IQ37_9FLOR9.510e-9846.41tRNA-dihydrouridine(20/20a) synthase n=1 Tax=Graci... [more]
A0A7S0D9F4_9EUKA1.270e-9646.13Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A0G4ELS3_VITBC1.850e-9647.74tRNA-dihydrouridine synthase n=2 Tax=Vitrella bras... [more]
K3Y7H3_SETIT4.430e-9541.87Dus domain-containing protein n=6 Tax=Paniceae Tax... [more]
A0A1E5VB94_9POAL4.430e-9543.78tRNA-dihydrouridine(20/20a) synthase n=1 Tax=Dicha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12340contigM-pyrifera_M_contig12340:1647..6660 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score676.4
Seed ortholog evalue9.4e-192
Seed eggNOG ortholog2880.D7FQR5
KEGG koko:K05539,ko:K05542
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.tRNA dihydrouridine synthase activity
EggNOG OGsCOG0042@1,KOG2335@2759
Ec32 ortholog descriptionFAD binding / catalytic/ tRNA dihydrouridine synthase
Ec32 orthologEc-01_000230.1
EC1.3.1.88
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Exons8
Model size1383
Cds size1383
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12340.4789.1prot_M-pyrifera_M_contig12340.4789.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12340 1647..6660 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815752.4397292-CDS-M-pyrifera_M_contig12340:1646..18021622815752.4397292-CDS-M-pyrifera_M_contig12340:1646..1802Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12340 1647..1802 -
1692277552.8234906-CDS-M-pyrifera_M_contig12340:1646..18021692277552.8234906-CDS-M-pyrifera_M_contig12340:1646..1802Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12340 1647..1802 -
1622815752.4541125-CDS-M-pyrifera_M_contig12340:2340..24251622815752.4541125-CDS-M-pyrifera_M_contig12340:2340..2425Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12340 2341..2425 -
1692277552.83356-CDS-M-pyrifera_M_contig12340:2340..24251692277552.83356-CDS-M-pyrifera_M_contig12340:2340..2425Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12340 2341..2425 -
1622815752.4715235-CDS-M-pyrifera_M_contig12340:2904..30621622815752.4715235-CDS-M-pyrifera_M_contig12340:2904..3062Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12340 2905..3062 -
1692277552.8421729-CDS-M-pyrifera_M_contig12340:2904..30621692277552.8421729-CDS-M-pyrifera_M_contig12340:2904..3062Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12340 2905..3062 -
1622815752.4862368-CDS-M-pyrifera_M_contig12340:4022..41301622815752.4862368-CDS-M-pyrifera_M_contig12340:4022..4130Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12340 4023..4130 -
1692277552.8513937-CDS-M-pyrifera_M_contig12340:4022..41301692277552.8513937-CDS-M-pyrifera_M_contig12340:4022..4130Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12340 4023..4130 -
1622815752.4982262-CDS-M-pyrifera_M_contig12340:4449..46411622815752.4982262-CDS-M-pyrifera_M_contig12340:4449..4641Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12340 4450..4641 -
1692277552.8671713-CDS-M-pyrifera_M_contig12340:4449..46411692277552.8671713-CDS-M-pyrifera_M_contig12340:4449..4641Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12340 4450..4641 -
1622815752.5077755-CDS-M-pyrifera_M_contig12340:4990..52661622815752.5077755-CDS-M-pyrifera_M_contig12340:4990..5266Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12340 4991..5266 -
1692277552.8834987-CDS-M-pyrifera_M_contig12340:4990..52661692277552.8834987-CDS-M-pyrifera_M_contig12340:4990..5266Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12340 4991..5266 -
1622815752.5180438-CDS-M-pyrifera_M_contig12340:5658..58441622815752.5180438-CDS-M-pyrifera_M_contig12340:5658..5844Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12340 5659..5844 -
1692277552.8937469-CDS-M-pyrifera_M_contig12340:5658..58441692277552.8937469-CDS-M-pyrifera_M_contig12340:5658..5844Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12340 5659..5844 -
1622815752.5276449-CDS-M-pyrifera_M_contig12340:6438..66601622815752.5276449-CDS-M-pyrifera_M_contig12340:6438..6660Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12340 6439..6660 -
1692277552.9029527-CDS-M-pyrifera_M_contig12340:6438..66601692277552.9029527-CDS-M-pyrifera_M_contig12340:6438..6660Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12340 6439..6660 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12340.4789.1

>prot_M-pyrifera_M_contig12340.4789.1 ID=prot_M-pyrifera_M_contig12340.4789.1|Name=mRNA_M-pyrifera_M_contig12340.4789.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=461bp
MMRLTAMSVSALAVMHSTRSFVLPFKAPSAPMTLCLTRARCQRISSRTHP
ARSTAEVTQVGAGSPSPIMGRGREVFSLAPMMEYTDRHMRFLLRLLTKRT
VLWTEMVPSPTITHNSDDLARFLDYNEGVEHPVVLQIGGSDTTIVSEACR
LARPYNYDAINLNCGCPSEKVAGKGAFGAALMRSPSHVKDLCLAMRDGAG
EETPITVKCRIGVDDDDSYEQLAAFVDEVYRGAGVTHFIIHARKAILGGL
SPAENRSIPPLRHDFVYRLVKDFPDVDFTLNGGINTYEEVRVALSCLEQG
AHGVMVGRSWSSKPWYWSQADSKFFGTKDPGLNRREVLETYAEYGERQEK
AYGGQWLACRRRLAKPVWHLFHGEKNGKKFRVALESLLREERPFGEILEK
SLQTLSQEQVDRLPGQSWDPRGSQEEKNVESLAVDPGCVSVPRGVPDGRF
RDGRMYYTDS*
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mRNA from alignment at M-pyrifera_M_contig12340:1647..6660-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12340.4789.1 ID=mRNA_M-pyrifera_M_contig12340.4789.1|Name=mRNA_M-pyrifera_M_contig12340.4789.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5014bp|location=Sequence derived from alignment at M-pyrifera_M_contig12340:1647..6660- (Macrocystis pyrifera P11B4 male)
ATGATGCGCCTCACGGCCATGAGTGTTTCTGCGCTGGCCGTAATGCACTC TACTAGATCCTTTGTGTTGCCTTTTAAGGCACCCTCGGCTCCAATGACAC TATGCCTGACGAGAGCGCGATGTCAGCGTATCTCAAGCCGGACACATCCA GCCCGCAGCACAGCAGAAGTTACTCAAGTGGGCGCAGGTTCGCCTTCTCC GATAATGGGTCGGGGCCGCGAGGTACGATGTAACGCTGCAGCAGGCACCA GAGTAGCAGTAATAGTGATAGTGCGCCAACTCGAACTTCGGATCGGAACC GTGTCTAATATACGACCTGCAGTAGGCTTCGGAGCATCGCTTATCGCACC AGTTCATATCTTGGAGTAGATGACACGCCTCTACTGTCGACTGATACTGC TGCCGTCGTTTCCTTCCGTCCTCAGCCATGTGCATCGCTTGTGCTCGTAA TATACTAGTGCTTCGTTCTGTGTTGTCAACAACGTTGTTCGTGGGCGTGA CCTACCAGTAGACCGTTAGAGGGGGGGGCATCATACTACATACCTGGTAT CAGGTACCAGGTATAGTATTGTGGAATTCGCCTGCCTTTCCTATCAAGCA TTGCGCTGCGAACCGTAGACGTTGACCTCTACGCTCTACGCTACTGTTTG TAGTTCGGCTTCATTAAGAGCGGAAAGAGGAGGTGTCGCATACCAGGTAT CATACCATTTATACTACTTACAGTATTTAATAGTAGTACTGCTGTCGTCC TCAACCATCGAGTCTTCTGGGGCGCATTGAAACTCACACGCTCTCGACTG CGCTGGTGAGGTGCAGGTGTTCTCGCTTGCTCCGATGATGGAGTACACCG ACAGACATATGCGGTTTCTGCTGCGCCTCTTGACGAAGCGTACGGTCCTG TGGACGGAGATGGTGCCGTCTCCCACCATCACGCACAACTCGGACGACCT GGCGAGGTTTTTGGACTACAACGAGGGAGTCGAGCACCCGGTCGTCTTGC AGGTGTGTTGTGGCGTGGCACAAACTGCTCTACCGCCCGTCGTACACGTC CTGGTGCACACTCGTTCTGAATGAAATTACCTTCGGTGGAAAGCGATTTC ATGTCGTACGAAGCACGAACAAACTGGCTATAAGCGAAGTACCAGGTATG TTGAAGTTTAGTAGTCAACGAGTATCAAGACGTTGCATTGCTACATGCAC CAATCGGTGACAACTTGCGAGCTTTTCGGCTCTGGGAAATTCTGACGGCG AATCGATAGGTGGTGCTGCCGAGTGAACGTACAGAGTACAGACGCACAAT CGTCTCTCCGACCTTGCCCGCGGGTCCTATATAATTTTTCACTCGGCAAT CACCTGCCCCTATTTGTGCCGAACGTCGCTCATGGCCATCTCAGATCGGT GGCTCAGACACCACCATCGTAAGTGAAGCCTGCCGTCTGGCCCGACCTTA CAACTACGACGCCATCAACCTTAACTGCGGTTGCCCGAGCGAGAAGGTGG CCGGCAAGGGGGCATTTGGAGCGGCACTGATGCGATCACCCTCGCATGTG AAAGATCTGTGCCTGGCGATGAGGGACGGGGCGGGCGAAGAAACGCCAAT AACTGTCAAGTGTCGAATAGGTGTCGATGACGATGACTCGTACGAGCAAC TAGCTGCATTCGTTGACGAGGTGCGTGGTGCGTTAGGCGTGGCGCTCGCA TGGAGATTGTGGCAGCCCACTCGGGATACCAAGAGAACATGGGGTAGGTG TGTCATCGTGCAGAGGCACAAAGATGGAGTTGTGTAGCTCGCGGCTGACG GGAAGTAATGCAACTTCTGCTAGTCGCTGCTGATGGACGAAATCCGAGTA CTTTGTGGCTCTAACTTTCTGCGCTTTCAGGCTCTTGCACGCAGAGCACT TAGCATCGTTCAACGCTTCAGCCCCATCACCGTACACCTGGTATTTTTCC ATTGTTTGATTTCGATGCTCTCTCATAAAAAATGCGGCGGTAAAACGATT TGGCCGGCGCTGACGACAGGTGTACCGCGGTGCAGGGGTGACGCACTTCA TTATTCACGCTCGTAAGGCCATCCTTGGGGGACTCAGCCCAGCGGAAAAC AGGAGCATTCCACCCTTGAGGCACGACTTCGTGTACCGCCTTGTGAAAGA CTTCCCAGATGTAGATTTCACGCTCAACGGAGGAATCAACACGTACGAAG AGGTGAGGGTCGTATTCCGGCCACAGTGGTCTTCCAAGCGGCAGGCTCGC CTTGTTGAATACATTGCTGTCGTTCTGCTTTGGTTGGGTGCCGGGCTTTA TAGGACAGCTCGATAAATGTGACGAAACAGGGTAGCGCAGCCACGGCGGT TGGACGTGCGCTTCGTTTTGAACTTTCGGACACGCTTTTGATAACATTAC CACACTTGATTGAGATAGACCGTATGCGGTGCCCTAGTTCGAACGCATGA TCATGAACGCTTGCAATAAATCTGTAGTGAGAGCTGGTTCTGCTTACTTT GGCTATTGCCCTGATTCGTGTGCTTTTCAGGCGCTGTCTTGCCTTGAACA AGGTGCGCATGGAGTGATGGTTGGAAGATCTTGGAGCAGCAAACCGTGGT ACTGGAGCCAGGCTGATTCTAAGTTTTTCGGGACGAAGGTAGGACTCAAC TGAGAGTTATCACACGGAAGTTGAAGCCGCTCCACCTTCACGCCACAAAT TGTTGATATTAATAGCATATTTGTACCTGTGAGATGGACGGCGCCGTCCG CAGCGATTTTTCTAAAGCAAAGGGAAGCTTAGCCGCACAATGTTGATGTG TATCCCATGAAGAGCCGATAAGGTCACCCCTGAAAGCGAGGCTGCCCCGT ACATGCTCGACGCCCGGTGCACTTTTTCGCTCTGATGGTATTCGCCCCTT TACCCATGTTCATTGGTGTTCCCGTGACAAACACCTGCTGTTTGTATCTT CAGTTGCTCAGTTTTTTTTTGTCGTTCAAGTTGTTTTTTCTAGTTTTTCC TGTCTTGTCCTTTAATGTTGGCCAACCAGCTGAGGCTGGGACTACCGACA ACGCTCACGTCCCGGATCTGCACCACAAGCGTTTCCTTAATGTCAATGTT GTTGCTGTTGTTGCTGTTGTTGCTTTTTTACTATAATTGGTGCAAACGAA ATTCTCTTGTCGTGTGGATTTTCGTACGTAGTGTTGTTTTTTTGTAGTAC TGTAATAGCGTTATTGGTTTCCAAGTGGCACGGGTCGATGTTTTTTCCTC GGTGTCCGGCTTTATCCGATACGTATTGGAATGTTTTTCTTTTTCTTCCA ACGGGACGCTGATCTTCATATCATGTGTAACCACGGACTAGATTTACAGA CTATGAGCTAATGTGAGAACACCACCATCATCATCATAATCACCATCATC CACACCATCATTCCAACATCGCTTCGTTGCCACCGAATCTGTGTCTATTA CTGGTGTACCACCCGGGTAGCCTCATCCTTACCACAATCTTCAACAGCAT CACGCATATTGTCGCTGCAGCTATTATTTGTGCTGTGTGTGTTCACAACG TTTTGTTGCGCTGATTCACGAGCGGAACCCCACCTTTTTTGTCACCAGGA TCCGGGCTTGAACCGTCGGGAAGTGCTTGAGACATACGCGGAATACGGAG AGCGGCAGGAGAAGGCGTACGGTGGGCAGTGGCTCGCTTGCCGCAGAAGA CTAGCGAAGCCAGTCTGGCATCTCTTCCATGGGGAGAAAAACGGGAAGAA ATTCAGGCAAGCCTCAGGCGACCCATAGTTCCACGGCGGAAACTTGGGGG TTTCTCTCCAGCAATATCTATTGCCACTTTGTCCCTAAATATGAGGACCG TTTGTACTGATTATTGGCACAAAAAAATCCCTTATATCAAGGGACAGAGT AGTATGAAATACGTACTAGGTATACTATAAGCCGCCGATATAAAGACAAT ATACTGAAGAGTTTTCAGCCGCCCGCCCGCTATACGTGCCACCTGATACC CACTACGTCATACCAGTACCTCGTACGAGTATGTTTTTTGTGACCGGAAG AGTGTGGATGTTATGCATGTTTCAGTACAGTGGGTGCGTTAGTAGGCGTA GTTTTGTTTTCCAGGTACATGGCTTTAATGGAAGATACGTACTGGCATGC CATGCGATGCCTAGTGGAACGTGCTCGTTTGGTTCGTCCACTCGTATGCT GAGCTCTCGCCCTTGTGTGCATTGAAAATGCGCAGAGTCGCCCTGGAGAG CCTTCTCAGGGAGGAAAGACCATTCGGGGAAATTCTGGAGAAGTCATTGC AAACTCTTTCTCAGGAGCAGGTAAGCTGAGGGCACTACATGTTGAGTCTT AGGTAGGTACGTAGGTGTCGAGGGGATGCGGGTGCACGAAAAAAACACTC CATAGCGAAATTACACACTGATGATGCCCTCACCGTCATGGCACAGTACG TCCCAGTTGATTTTTTGGAGGAGCAGTCCACCATCTGCTTCTGTGCCGTT TGGACGGTCAACGTTAAAAGCGTTTGTTTTTCTTCTATTTGGAGGCCCCT CGCAACCGTCAGCGTTACGAAGAACTGTTGAGCTCGAACGCCAGTTGCAT ATGCGTATGCCTGCCTGCTGGGCGCCCTCGCAAGTCATGCACAGGATGTG GGCAGAGGGAAACTGGTGCAACGCTGACGAACTCGCTTTAAGCTCACGGC AGCGAGGTCCGTAATAATCGATCCTGAGCCCAGGTTGCACCTTATCTAAT AATACCACACGGCACGATTTTATCAATAACTTCAAATCAACGGTTTTCAT ACCTGGAACCTTGTACCTGATCGTGCGCCTTCCGTCCCACGATTTGTTTT TTGCGCAGGTCGATAGGTTACCTGGACAAAGCTGGGACCCTCGAGGATCG CAAGAGGAAAAAAATGTAGAATCTCTAGCGGTAGATCCTGGGTGTGTAAG CGTACCGCGGGGTGTCCCCGATGGTCGTTTTCGCGATGGGCGCATGTATT ACACAGACAGTTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig12340:1647..6660-

>mRNA_M-pyrifera_M_contig12340.4789.1 ID=mRNA_M-pyrifera_M_contig12340.4789.1|Name=mRNA_M-pyrifera_M_contig12340.4789.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2766bp|location=Sequence derived from alignment at M-pyrifera_M_contig12340:1647..6660- (Macrocystis pyrifera P11B4 male)
ATGATGCGCCTCACGGCCATGAGTGTTTCTGCGCTGGCCGTAATGCACTC
TACTAGATCCTTTGTGTTGCCTTTTAAGGCACCCTCGGCTCCAATGACAC
TATGCCTGACGAGAGCGCGATGTCAGCGTATCTCAAGCCGGACACATCCA
GCCCGCAGCACAGCAGAAGTTACTCAAGTGGGCGCAGGTTCGCCTTCTCC
GATAATGGGTCGGGGCCGCGAGATGATGCGCCTCACGGCCATGAGTGTTT
CTGCGCTGGCCGTAATGCACTCTACTAGATCCTTTGTGTTGCCTTTTAAG
GCACCCTCGGCTCCAATGACACTATGCCTGACGAGAGCGCGATGTCAGCG
TATCTCAAGCCGGACACATCCAGCCCGCAGCACAGCAGAAGTTACTCAAG
TGGGCGCAGGTTCGCCTTCTCCGATAATGGGTCGGGGCCGCGAGGTGTTC
TCGCTTGCTCCGATGATGGAGTACACCGACAGACATATGCGGTTTCTGCT
GCGCCTCTTGACGAAGCGTACGGTCCTGTGGACGGAGATGGTGCCGTCTC
CCACCATCACGCACAACTCGGACGACCTGGCGAGGTTTTTGGACTACAAC
GAGGGAGTCGAGCACCCGGTCGTCTTGCAGGTGTTCTCGCTTGCTCCGAT
GATGGAGTACACCGACAGACATATGCGGTTTCTGCTGCGCCTCTTGACGA
AGCGTACGGTCCTGTGGACGGAGATGGTGCCGTCTCCCACCATCACGCAC
AACTCGGACGACCTGGCGAGGTTTTTGGACTACAACGAGGGAGTCGAGCA
CCCGGTCGTCTTGCAGATCGGTGGCTCAGACACCACCATCGTAAGTGAAG
CCTGCCGTCTGGCCCGACCTTACAACTACGACGCCATCAACCTTAACTGC
GGTTGCCCGAGCGAGAAGGTGGCCGGCAAGGGGGCATTTGGAGCGGCACT
GATGCGATCACCCTCGCATGTGAAAGATCTGTGCCTGGCGATGAGGGACG
GGGCGGGCGAAGAAACGCCAATAACTGTCAAGTGTCGAATAGGTGTCGAT
GACGATGACTCGTACGAGCAACTAGCTGCATTCGTTGACGAGATCGGTGG
CTCAGACACCACCATCGTAAGTGAAGCCTGCCGTCTGGCCCGACCTTACA
ACTACGACGCCATCAACCTTAACTGCGGTTGCCCGAGCGAGAAGGTGGCC
GGCAAGGGGGCATTTGGAGCGGCACTGATGCGATCACCCTCGCATGTGAA
AGATCTGTGCCTGGCGATGAGGGACGGGGCGGGCGAAGAAACGCCAATAA
CTGTCAAGTGTCGAATAGGTGTCGATGACGATGACTCGTACGAGCAACTA
GCTGCATTCGTTGACGAGGTGTACCGCGGTGCAGGGGTGACGCACTTCAT
TATTCACGCTCGTAAGGCCATCCTTGGGGGACTCAGCCCAGCGGAAAACA
GGAGCATTCCACCCTTGAGGCACGACTTCGTGTACCGCCTTGTGAAAGAC
TTCCCAGATGTAGATTTCACGCTCAACGGAGGAATCAACACGTACGAAGA
GGTGAGGGTCGTGTACCGCGGTGCAGGGGTGACGCACTTCATTATTCACG
CTCGTAAGGCCATCCTTGGGGGACTCAGCCCAGCGGAAAACAGGAGCATT
CCACCCTTGAGGCACGACTTCGTGTACCGCCTTGTGAAAGACTTCCCAGA
TGTAGATTTCACGCTCAACGGAGGAATCAACACGTACGAAGAGGTGAGGG
TCGCGCTGTCTTGCCTTGAACAAGGTGCGCATGGAGTGATGGTTGGAAGA
TCTTGGAGCAGCAAACCGTGGTACTGGAGCCAGGCTGATTCTAAGTTTTT
CGGGACGAAGGCGCTGTCTTGCCTTGAACAAGGTGCGCATGGAGTGATGG
TTGGAAGATCTTGGAGCAGCAAACCGTGGTACTGGAGCCAGGCTGATTCT
AAGTTTTTCGGGACGAAGGATCCGGGCTTGAACCGTCGGGAAGTGCTTGA
GACATACGCGGAATACGGAGAGCGGCAGGAGAAGGCGTACGGTGGGCAGT
GGCTCGCTTGCCGCAGAAGACTAGCGAAGCCAGTCTGGCATCTCTTCCAT
GGGGAGAAAAACGGGAAGAAATTCAGGATCCGGGCTTGAACCGTCGGGAA
GTGCTTGAGACATACGCGGAATACGGAGAGCGGCAGGAGAAGGCGTACGG
TGGGCAGTGGCTCGCTTGCCGCAGAAGACTAGCGAAGCCAGTCTGGCATC
TCTTCCATGGGGAGAAAAACGGGAAGAAATTCAGAGTCGCCCTGGAGAGC
CTTCTCAGGGAGGAAAGACCATTCGGGGAAATTCTGGAGAAGTCATTGCA
AACTCTTTCTCAGGAGCAGAGTCGCCCTGGAGAGCCTTCTCAGGGAGGAA
AGACCATTCGGGGAAATTCTGGAGAAGTCATTGCAAACTCTTTCTCAGGA
GCAGGTCGATAGGTTACCTGGACAAAGCTGGGACCCTCGAGGATCGCAAG
AGGAAAAAAATGTAGAATCTCTAGCGGTAGATCCTGGGTGTGTAAGCGTA
CCGCGGGGTGTCCCCGATGGTCGTTTTCGCGATGGGCGCATGTATTACAC
AGACAGTTAAGTCGATAGGTTACCTGGACAAAGCTGGGACCCTCGAGGAT
CGCAAGAGGAAAAAAATGTAGAATCTCTAGCGGTAGATCCTGGGTGTGTA
AGCGTACCGCGGGGTGTCCCCGATGGTCGTTTTCGCGATGGGCGCATGTA
TTACACAGACAGTTAA
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