mRNA_M-pyrifera_M_contig123394.4787.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Match: A0A2E7KKI1_9PLAN (ABC transporter permease n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KKI1_9PLAN) HSP 1 Score: 338 bits (868), Expect = 3.310e-116 Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 1
Query: 1 LEDVIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 522
LEDV+DVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ
Sbjct: 9 LEDVVDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 182
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Match: A0A6I6AGH7_9PLAN (ABC transporter permease n=1 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6AGH7_9PLAN) HSP 1 Score: 305 bits (780), Expect = 8.210e-103 Identity = 153/174 (87.93%), Postives = 165/174 (94.83%), Query Frame = 1
Query: 1 LEDVIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 522
LED++D+IKSS+LCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFN+ P+EYLPNLAAGYLFWTLIA +SE+PTIFI+NAAYLKDMKINLL+FVFR+LARNTIIFLHNALFIMFV FYF IWP QTLLV+PGL LVLLNLFWITLF GIVGARYRDLAPIIQ
Sbjct: 9 LEDMVDMIKSSQLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNVPPEEYLPNLAAGYLFWTLIAVVLSESPTIFIENAAYLKDMKINLLIFVFRSLARNTIIFLHNALFIMFVTFYFGIWPTWQTLLVLPGLILVLLNLFWITLFLGIVGARYRDLAPIIQ 182
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Match: A0A518ABG4_9PLAN (ABC-2 type transporter n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518ABG4_9PLAN) HSP 1 Score: 293 bits (749), Expect = 4.270e-98 Identity = 144/174 (82.76%), Postives = 162/174 (93.10%), Query Frame = 1
Query: 1 LEDVIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 522
LED+ID+IKSS+LC+FLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLF M P EYLPNLAAGYLFWT+I+ +SE+PT+FI+NAAYLKDMKINLLVF+FR+LARNTIIFLHNA+FI FV YF+IWPQ +LV+PG+ LVLLNLFWITLFFGI+GARYRDLAPIIQ
Sbjct: 9 LEDMIDMIKSSQLCLFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFKMPPGEYLPNLAAGYLFWTMISTMLSESPTVFIENAAYLKDMKINLLVFIFRSLARNTIIFLHNAIFIAFVSLYFQIWPQWPMILVVPGIALVLLNLFWITLFFGIIGARYRDLAPIIQ 182
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Match: A0A517W3V7_9PLAN (ABC-2 type transporter n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W3V7_9PLAN) HSP 1 Score: 276 bits (705), Expect = 2.100e-91 Identity = 138/174 (79.31%), Postives = 151/174 (86.78%), Query Frame = 1
Query: 1 LEDVIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 522
L D +DV KS RLC FLAWFDIRIRYRRSKIGPFWITISMAIFI+ALG VYSKLFNM +EY+PNLAAGYLFWTL+A +SE+PTIFI+N +YLKDMKINLLV V RAL RN IIFLHNA+FI VC YF IWPQ Q L VIPG+FLVL+NLFWITL FGI+GARYRDLAPIIQ
Sbjct: 9 LNDFVDVFKSFRLCFFLAWFDIRIRYRRSKIGPFWITISMAIFIVALGAVYSKLFNMKAEEYMPNLAAGYLFWTLMATALSESPTIFIENGSYLKDMKINLLVLVVRALTRNFIIFLHNAVFIAGVCLYFGIWPQWQMLFVIPGVFLVLINLFWITLVFGILGARYRDLAPIIQ 182
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Match: A0A517VJ44_9PLAN (ABC-2 type transporter n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VJ44_9PLAN) HSP 1 Score: 256 bits (654), Expect = 1.180e-83 Identity = 126/174 (72.41%), Postives = 146/174 (83.91%), Query Frame = 1
Query: 1 LEDVIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 522
L D++DV KSS+LC+FLAWFDIRIRYRRSK+GPFWITISMAIFIIALGVVYSKLF + EYLPNLA GYLFWT+IA T+ E+PTIFI N +Y+KDMK+NLLV V RAL RN II LHNA+FI+ VC Y+ IWP Q L +IPGL +VL+NLFWI L GI+GAR+RDL PIIQ
Sbjct: 9 LNDIVDVFKSSQLCLFLAWFDIRIRYRRSKLGPFWITISMAIFIIALGVVYSKLFKVPAGEYLPNLAIGYLFWTMIATTLGESPTIFITNNSYIKDMKVNLLVLVVRALTRNFIILLHNAVFIVGVCLYYHIWPHWQMLALIPGLIIVLMNLFWIMLLLGILGARFRDLEPIIQ 182
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Match: A0A1I7I769_9PROT (ABC-2 type transport system permease protein/lipopolysaccharide transport system permease protein n=1 Tax=Nitrosospira multiformis TaxID=1231 RepID=A0A1I7I769_9PROT) HSP 1 Score: 177 bits (448), Expect = 2.140e-52 Identity = 90/173 (52.02%), Postives = 119/173 (68.79%), Query Frame = 1
Query: 4 EDVIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 522
D+ +K+ + +FLAW DI++RYRRSKIGP WIT+SMAIF + LGVVYSKL EYLP L+ ++ W LI++ + E P +++DNAAY+KD+ IN +FR +ARN ++F HNAL I+ + YF +WP LL IPGL LVLLNL I + I GARYRD+A I Q
Sbjct: 14 SDLFAALKAYDIWLFLAWLDIKLRYRRSKIGPLWITLSMAIFCLTLGVVYSKLLKTDISEYLPFLSVSFVIWGLISSLLIEFPNLYVDNAAYIKDIHINFYTVLFRVVARNAVVFGHNALIILGIYIYFDLWPGFTFLLAIPGLGLVLLNLVSIGVILSIFGARYRDVAQINQ 186
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Match: A0A4R6UV67_9GAMM (ABC-2 type transport system permease protein/lipopolysaccharide transport system permease protein n=1 Tax=Permianibacter aggregans TaxID=1510150 RepID=A0A4R6UV67_9GAMM) HSP 1 Score: 175 bits (444), Expect = 6.820e-52 Identity = 88/173 (50.87%), Postives = 124/173 (71.68%), Query Frame = 1
Query: 4 EDVIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 522
+D+ I+S L +L+W DIR+RYRRSKIGP WIT+SMA+F +ALG VYSKLFN EYLP L+ GY+ W+ ++ +E P IF+D++AY KD+++N LV + RA +R TIIF HN + ++ + FYF ++P L + P L LV+ NLF+I + IVGAR+RD+API+Q
Sbjct: 6 KDISLAIRSYHLWGYLSWQDIRLRYRRSKIGPLWITLSMALFCLALGFVYSKLFNADLKEYLPFLSFGYIAWSFVSGLTTEMPNIFVDSSAYFKDIRLNPLVVIARAFSRATIIFAHNLIIVVGIWFYFDMFPGWNLLQIFPSLALVVCNLFFIGVCLAIVGARFRDIAPIVQ 178
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Match: A0A7Z7HPN7_9PROT (Transport permease protein n=1 Tax=Sterolibacterium denitrificans TaxID=157592 RepID=A0A7Z7HPN7_9PROT) HSP 1 Score: 174 bits (442), Expect = 2.040e-51 Identity = 89/173 (51.45%), Postives = 116/173 (67.05%), Query Frame = 1
Query: 4 EDVIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 522
D++ + L FLAW DIRIRYRRS+IGPFWIT+S AIF +ALG+VY +LF E LP L+ G + W+ ++ I E P +F++NA Y+KDM+IN L + RA+ARN IIF HN L + + YF IWP LL +PG+ LV+LNL I + IVGAR+RDLA I Q
Sbjct: 20 HDLLAAFMAYELWSFLAWQDIRIRYRRSRIGPFWITLSTAIFCVALGIVYGRLFKTEISELLPFLSIGMVVWSFVSTCIGEMPNLFVENAPYIKDMRINPLTILLRAIARNAIIFAHNLLIVAGIYLYFGIWPGWTGLLALPGMLLVMLNLLAIGVILSIVGARFRDLAQITQ 192
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Match: A0A257DA69_9BURK (ABC transporter permease n=1 Tax=Burkholderiales bacterium PBB1 TaxID=2015563 RepID=A0A257DA69_9BURK) HSP 1 Score: 171 bits (434), Expect = 2.840e-50 Identity = 90/173 (52.02%), Postives = 117/173 (67.63%), Query Frame = 1
Query: 4 EDVIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 522
D+ + I S L FLAW DIRI+YRRSKIGP W+T+SMAIF IALG+VYS+LF +E LP LA G + W ++ + E P +F+DNA Y++DM+IN L + R+LARN IIF HN L ++ + +F IWP LL +PG LV LNL I + IVGAR+RDL+ I Q
Sbjct: 15 NDLTEAISSYELWSFLAWQDIRIKYRRSKIGPMWLTLSMAIFCIALGMVYSQLFKTKIEELLPFLAIGLVVWGFLSNCLGEMPNLFVDNAPYIRDMRINPLSIILRSLARNIIIFGHNLLIVIGIYIFFGIWPGWGVLLALPGFLLVALNLLAIAIPLSIVGARFRDLSQITQ 187
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Match: UPI000D272A79 (ABC transporter permease n=1 Tax=Methylomonas sp. TaxID=418 RepID=UPI000D272A79) HSP 1 Score: 171 bits (432), Expect = 5.370e-50 Identity = 86/171 (50.29%), Postives = 118/171 (69.01%), Query Frame = 1
Query: 10 VIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 522
+ID +KS + ++LAW DIR+RYRRS+IGPFWIT+SMAIF +LGVVYS+LF +YLP L+ G++ W I+ ++E P +++DNAAY+KD+KIN +FRA+ R I LHN L I+ + YF I P LL +PG LV LNL + + + GAR+RD+API Q
Sbjct: 15 LIDALKSREIWLYLAWQDIRLRYRRSRIGPFWITLSMAIFCFSLGVVYSQLFKADITDYLPFLSVGFVIWGFISGMLTEFPNLYVDNAAYIKDIKINPFNIIFRAVTRQVITLLHNCLIIVGIYIYFGINPGFTALLALPGFILVALNLVALGVSLSLFGARFRDVAPITQ 185 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123394.4787.1 >prot_M-pyrifera_M_contig123394.4787.1 ID=prot_M-pyrifera_M_contig123394.4787.1|Name=mRNA_M-pyrifera_M_contig123394.4787.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp LEDVIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVback to top mRNA from alignment at M-pyrifera_M_contig123394:1..522- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123394.4787.1 ID=mRNA_M-pyrifera_M_contig123394.4787.1|Name=mRNA_M-pyrifera_M_contig123394.4787.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=522bp|location=Sequence derived from alignment at M-pyrifera_M_contig123394:1..522- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123394:1..522- >mRNA_M-pyrifera_M_contig123394.4787.1 ID=mRNA_M-pyrifera_M_contig123394.4787.1|Name=mRNA_M-pyrifera_M_contig123394.4787.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1044bp|location=Sequence derived from alignment at M-pyrifera_M_contig123394:1..522- (Macrocystis pyrifera P11B4 male)back to top |