mRNA_M-pyrifera_M_contig123386.4786.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123386.4786.1 vs. uniprot
Match: A0A540K6A2_MALBA (Uncharacterized protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540K6A2_MALBA) HSP 1 Score: 86.3 bits (212), Expect = 8.880e-19 Identity = 46/116 (39.66%), Postives = 65/116 (56.03%), Query Frame = 1
Query: 1 WMVANLRYNSDREEDGMSFKFRMESMGELFASYQEYCAWDVLEAPPSGTSIDWVCAENSPRWTPAMMDELHS---RTAPGS----TIQVLPKAGHWLHMDNPVGLSSLLVRVLKDL 327
W+ NL+ D E ++ F ++ ++F SYQE W +LE PP +ID V AENS RW P ++ L S R A GS + VLPK+GHW+H+DNP GL ++ + L
Sbjct: 83 WIGTNLKKQGDHE----TWAFNLDGAVQMFKSYQEKSYWPLLEHPPKDMAIDVVRAENSDRWDPDVVQRLGSLANREANGSEGKVSFHVLPKSGHWVHVDNPKGLLEIVAPRISSL 194
BLAST of mRNA_M-pyrifera_M_contig123386.4786.1 vs. uniprot
Match: A0A498IDE6_MALDO ((R)-mandelonitrile lyase n=1 Tax=Malus domestica TaxID=3750 RepID=A0A498IDE6_MALDO) HSP 1 Score: 89.7 bits (221), Expect = 1.310e-18 Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 1
Query: 1 WMVANLRYNSDREEDGMSFKFRMESMGELFASYQEYCAWDVLEAPPSGTSIDWVCAENSPRWTPAMMDELHS---RTAPGS----TIQVLPKAGHWLHMDNPVGLSSLLVRVLKDL 327
W+ NL+ D E ++ F ++ ++F SYQE W +LE PP T+ID V AENS RW P ++ L S R A GS ++ VLPK+GHW+H+DNP GL ++ + L
Sbjct: 1391 WIGTNLKKQGDHE----TWAFNLDGAVQMFKSYQEKSYWPLLEHPPKDTAIDVVRAENSDRWDPDVVQRLGSLANREANGSEGKVSVHVLPKSGHWVHVDNPKGLLEIVAPRISSL 1502
BLAST of mRNA_M-pyrifera_M_contig123386.4786.1 vs. uniprot
Match: A0A7I8KT16_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KT16_SPIIN) HSP 1 Score: 88.2 bits (217), Expect = 1.940e-18 Identity = 40/112 (35.71%), Postives = 67/112 (59.82%), Query Frame = 1
Query: 1 WMVANLRYNSDREEDGMSFKFRMESMGELFASYQEYCAWDVLEAPPSGTSIDWVCAENSPRWTPAMMDELHSRTAPG---------STIQVLPKAGHWLHMDNPVGLSSLLV 309
W+ +NL+ ++ + +++ F +++ ++F SY+E W +LE PP G I+ VCAENS RW+P + L P +T+ VLP++GHW+H+DNP GL ++V
Sbjct: 241 WIASNLK----KDGEHLTWAFDLQAAIDMFDSYRERSYWTLLEHPPGGLEIEMVCAENSDRWSPQVNARLEKLAHPQRDGGGVEGKTTVHVLPRSGHWVHVDNPKGLLEIMV 348
BLAST of mRNA_M-pyrifera_M_contig123386.4786.1 vs. uniprot
Match: A0A7J7NFU6_9MAGN (AB hydrolase-1 domain-containing protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7NFU6_9MAGN) HSP 1 Score: 87.8 bits (216), Expect = 2.140e-18 Identity = 43/110 (39.09%), Postives = 65/110 (59.09%), Query Frame = 1
Query: 1 WMVANLRYNSDREEDGMSFKFRMESMGELFASYQEYCAWDVLEAPPSGTSIDWVCAENSPRWTPAMMDELHSRTAPGS--------TIQVLPKAGHWLHMDNPVGLSSLL 306
W+ NL+ + D E ++ F ++ E+F SY+E W +LE PP+G I+ V AENS RW P ++ +L S A + ++ VLPK+GHW+H+DNP GL +L
Sbjct: 217 WIGTNLKKSGDHE----TWAFDIQGANEMFESYREESYWSLLEDPPNGLQIEIVRAENSDRWRPDVVQQLESLAARRAKDDSEGKVSVHVLPKSGHWVHVDNPKGLLEIL 322
BLAST of mRNA_M-pyrifera_M_contig123386.4786.1 vs. uniprot
Match: D7TJ98_VITVI (AB hydrolase-1 domain-containing protein n=2 Tax=Vitis TaxID=3603 RepID=D7TJ98_VITVI) HSP 1 Score: 86.3 bits (212), Expect = 7.910e-18 Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = 1
Query: 1 WMVANLRYNSDREEDGMSFKFRMESMGELFASYQEYCAWDVLEAPPSGTSIDWVCAENSPRWTPAMMDELHS---RTAPGS----TIQVLPKAGHWLHMDNPVGLSSLLVRVLKDL 327
W+ +NL+ + + E ++ F +E ++F SY+E W +LE PP G I V AENS RW P ++ L S R GS ++ VLPKAGHW+H+DNP GL ++ L L
Sbjct: 219 WIGSNLKKSGEHE----TWAFNLEGAVQMFNSYRETDYWSLLEHPPQGMEITIVRAENSDRWDPDVIQRLESLAAREGNGSEGKVSVHVLPKAGHWVHVDNPKGLLDIVAPKLASL 330
BLAST of mRNA_M-pyrifera_M_contig123386.4786.1 vs. uniprot
Match: A0A438JSE9_VITVI (Ubiquitin-60S ribosomal protein L40 n=101 Tax=cellular organisms TaxID=131567 RepID=A0A438JSE9_VITVI) HSP 1 Score: 86.3 bits (212), Expect = 2.070e-17 Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = 1
Query: 1 WMVANLRYNSDREEDGMSFKFRMESMGELFASYQEYCAWDVLEAPPSGTSIDWVCAENSPRWTPAMMDELHS---RTAPGS----TIQVLPKAGHWLHMDNPVGLSSLLVRVLKDL 327
W+ +NL+ + + E ++ F +E ++F SY+E W +LE PP G I V AENS RW P ++ L S R GS ++ VLPKAGHW+H+DNP GL ++ L L
Sbjct: 283 WIGSNLKKSGEHE----TWAFNLEGAVQMFNSYRETDYWSLLEHPPQGMEITIVRAENSDRWDPDVIQRLESLAAREGNGSEGKVSVHVLPKAGHWVHVDNPKGLLDIVAPKLASL 394
BLAST of mRNA_M-pyrifera_M_contig123386.4786.1 vs. uniprot
Match: A0A835LJY9_9MAGN (AB hydrolase-1 domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835LJY9_9MAGN) HSP 1 Score: 85.5 bits (210), Expect = 3.070e-17 Identity = 39/112 (34.82%), Postives = 66/112 (58.93%), Query Frame = 1
Query: 1 WMVANLRYNSDREEDGMSFKFRMESMGELFASYQEYCAWDVLEAPPSGTSIDWVCAENSPRWTPAMMDELHSRTAPGS---TIQVLPKAGHWLHMDNPVGLSSLLVRVLKDL 327
W+ +NL+ + D E + F ++ ++F SY+E W +LE PP G + + AENS RW+P+++ L S + ++ +LPK+GHW+H+DNP GL ++ LK +
Sbjct: 328 WIGSNLKKSGDHE----TLAFNLDGAVQMFNSYREQSYWSLLEHPPEGLQVAVLRAENSDRWSPSVVQRLESLADNSNGKISVHLLPKSGHWVHVDNPKGLLEIVAPSLKTI 435
BLAST of mRNA_M-pyrifera_M_contig123386.4786.1 vs. uniprot
Match: A0A166ESG9_DAUCS (AB hydrolase-1 domain-containing protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166ESG9_DAUCS) HSP 1 Score: 84.3 bits (207), Expect = 3.900e-17 Identity = 44/116 (37.93%), Postives = 67/116 (57.76%), Query Frame = 1
Query: 1 WMVANLRYNSDREEDGMSFKFRMESMGELFASYQEYCAWDVLEAPPSGTSIDWVCAENSPRWTPAM---MDELHSRTAPGS----TIQVLPKAGHWLHMDNPVGLSSLLVRVLKDL 327
W+ +NL+ + E+G ++ F +E E+F SY++ W +LE PP G I V AENS RW P + ++ L SR G ++ VLPK+GHW+H+DNP GL ++ + L
Sbjct: 214 WIGSNLK----KTEEGETWAFDLEGAVEMFNSYRKTDYWPLLENPPEGMEIAIVRAENSDRWDPDVVQRLESLASRKVDGGGGKVSVHVLPKSGHWVHVDNPKGLLEIVTPKISSL 325
BLAST of mRNA_M-pyrifera_M_contig123386.4786.1 vs. uniprot
Match: A0A7N0UBQ3_KALFE (AB hydrolase-1 domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UBQ3_KALFE) HSP 1 Score: 84.0 bits (206), Expect = 5.740e-17 Identity = 43/116 (37.07%), Postives = 66/116 (56.90%), Query Frame = 1
Query: 1 WMVANLRYNSDREEDGMSFKFRMESMGELFASYQEYCAWDVLEAPPSGTSIDWVCAENSPRWTPAMMDELHS------RTAPGS-TIQVLPKAGHWLHMDNPVGLSSLLVRVLKDL 327
W+ +NL+ + D E ++ F ++ ++F SY+E W +LE PP+GT I V AE S RW ++ L + R A G ++ VLPKAGHW+H+DNP GL ++ + L
Sbjct: 220 WIGSNLKKSGDHE----TWAFNLDGAIQMFNSYREKSYWSLLERPPAGTEIAMVVAEKSDRWDSNIIQRLENLASREPREAHGKLSVTVLPKAGHWVHVDNPKGLLDIIAPKMASL 331
BLAST of mRNA_M-pyrifera_M_contig123386.4786.1 vs. uniprot
Match: A0A251N9L3_PRUPE (AB hydrolase-1 domain-containing protein n=9 Tax=Prunus TaxID=3754 RepID=A0A251N9L3_PRUPE) HSP 1 Score: 84.0 bits (206), Expect = 6.240e-17 Identity = 44/116 (37.93%), Postives = 64/116 (55.17%), Query Frame = 1
Query: 1 WMVANLRYNSDREEDGMSFKFRMESMGELFASYQEYCAWDVLEAPPSGTSIDWVCAENSPRWTPAMMDELHS---RTAPGS----TIQVLPKAGHWLHMDNPVGLSSLLVRVLKDL 327
W+ NL+ D E ++ F ++ + ++F SYQE W +LE PP I V AENS RW P ++ L S R GS ++ VLPK+GHW+H+DNP GL ++ + L
Sbjct: 228 WIGTNLKKQGDHE----TWAFNLDGVVQMFKSYQEKSYWHLLEQPPKDMEIAVVRAENSDRWDPDVIQRLGSLANREGDGSEGKFSVHVLPKSGHWVHVDNPKGLLEIVAPRISSL 339 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123386.4786.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123386.4786.1 >prot_M-pyrifera_M_contig123386.4786.1 ID=prot_M-pyrifera_M_contig123386.4786.1|Name=mRNA_M-pyrifera_M_contig123386.4786.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp MVANLRYNSDREEDGMSFKFRMESMGELFASYQEYCAWDVLEAPPSGTSIback to top mRNA from alignment at M-pyrifera_M_contig123386:139..523- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123386.4786.1 ID=mRNA_M-pyrifera_M_contig123386.4786.1|Name=mRNA_M-pyrifera_M_contig123386.4786.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=385bp|location=Sequence derived from alignment at M-pyrifera_M_contig123386:139..523- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123386:139..523- >mRNA_M-pyrifera_M_contig123386.4786.1 ID=mRNA_M-pyrifera_M_contig123386.4786.1|Name=mRNA_M-pyrifera_M_contig123386.4786.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig123386:139..523- (Macrocystis pyrifera P11B4 male)back to top |