prot_M-pyrifera_M_contig123375.4785.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig123375.4785.1
Unique Nameprot_M-pyrifera_M_contig123375.4785.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length54
Homology
BLAST of mRNA_M-pyrifera_M_contig123375.4785.1 vs. uniprot
Match: UPI00189E5DF1 (LOW QUALITY PROTEIN: ryanodine receptor 1 n=1 Tax=Choloepus didactylus TaxID=27675 RepID=UPI00189E5DF1)

HSP 1 Score: 56.6 bits (135), Expect = 5.990e-8
Identity = 23/54 (42.59%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    1 LREEDEELRQQLRSSCFVCGISADLFDRNSKNGFDRHVREDHAVGQYAQLLMYL 54
            LR++ E++R+ + + CF+CGIS+D FD  + +GF+ H  E+H +  Y   LMYL
Sbjct: 4950 LRDQQEQVREDMETKCFICGISSDYFD-TTPHGFETHTLEEHNLANYMFFLMYL 5002          
BLAST of mRNA_M-pyrifera_M_contig123375.4785.1 vs. uniprot
Match: A0A7S1IMJ2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IMJ2_9EUGL)

HSP 1 Score: 55.8 bits (133), Expect = 1.110e-7
Identity = 22/54 (40.74%), Postives = 35/54 (64.81%), Query Frame = 0
Query:    1 LREEDEELRQQLRSSCFVCGISADLFDRNSKNGFDRHVREDHAVGQYAQLLMYL 54
            LR+  +++ +     CF+CGISAD+FD++   GFD+H RE H + QY   + +L
Sbjct:  290 LRDAKQKVEEDTMGRCFICGISADIFDQHVDGGFDKHCRESHNMWQYLFFMYHL 343          
BLAST of mRNA_M-pyrifera_M_contig123375.4785.1 vs. uniprot
Match: A0A5A9P1E4_9TELE (Ryanodine receptor 1 n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9P1E4_9TELE)

HSP 1 Score: 55.8 bits (133), Expect = 1.120e-7
Identity = 22/54 (40.74%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    1 LREEDEELRQQLRSSCFVCGISADLFDRNSKNGFDRHVREDHAVGQYAQLLMYL 54
            LR++ E++R+ + + CF+CGI +D FD ++ +GF+ H  E+H +  Y   LMYL
Sbjct: 1165 LRDQQEQVREDMETKCFICGIGSDYFD-STPHGFETHTMEEHNLANYMFFLMYL 1217          
BLAST of mRNA_M-pyrifera_M_contig123375.4785.1 vs. uniprot
Match: A0A3N0XCL1_ANAGA (Ryanodine receptor 1 n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0XCL1_ANAGA)

HSP 1 Score: 55.8 bits (133), Expect = 1.120e-7
Identity = 22/54 (40.74%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    1 LREEDEELRQQLRSSCFVCGISADLFDRNSKNGFDRHVREDHAVGQYAQLLMYL 54
            LR++ E++R+ + + CF+CGI +D FD ++ +GF+ H  E+H +  Y   LMYL
Sbjct: 1180 LRDQQEQVREDMETKCFICGIGSDYFD-STPHGFETHTMEEHNLANYMFFLMYL 1232          
BLAST of mRNA_M-pyrifera_M_contig123375.4785.1 vs. uniprot
Match: A0A7S1IMD9_9EUGL (Hypothetical protein n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IMD9_9EUGL)

HSP 1 Score: 55.8 bits (133), Expect = 1.120e-7
Identity = 22/54 (40.74%), Postives = 35/54 (64.81%), Query Frame = 0
Query:    1 LREEDEELRQQLRSSCFVCGISADLFDRNSKNGFDRHVREDHAVGQYAQLLMYL 54
            LR+  +++ +     CF+CGISAD+FD++   GFD+H RE H + QY   + +L
Sbjct: 1258 LRDAKQKVEEDTMGRCFICGISADIFDQHVDGGFDKHCRESHNMWQYLFFMYHL 1311          
BLAST of mRNA_M-pyrifera_M_contig123375.4785.1 vs. uniprot
Match: A0A7J6C6N0_9TELE (Uncharacterized protein n=1 Tax=Onychostoma macrolepis TaxID=369639 RepID=A0A7J6C6N0_9TELE)

HSP 1 Score: 55.8 bits (133), Expect = 1.120e-7
Identity = 22/54 (40.74%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    1 LREEDEELRQQLRSSCFVCGISADLFDRNSKNGFDRHVREDHAVGQYAQLLMYL 54
            LR++ E++R+ + + CF+CGI +D FD ++ +GF+ H  E+H +  Y   LMYL
Sbjct: 3025 LRDQQEQVREDMETKCFICGIGSDYFD-STPHGFETHTMEEHNLANYMFFLMYL 3077          
BLAST of mRNA_M-pyrifera_M_contig123375.4785.1 vs. uniprot
Match: A0A553QEV1_9TELE (B30.2/SPRY domain-containing protein (Fragment) n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553QEV1_9TELE)

HSP 1 Score: 55.8 bits (133), Expect = 1.120e-7
Identity = 22/54 (40.74%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    1 LREEDEELRQQLRSSCFVCGISADLFDRNSKNGFDRHVREDHAVGQYAQLLMYL 54
            LR++ E++R+ + + CF+CGI +D FD ++ +GF+ H  E+H +  Y   LMYL
Sbjct: 3451 LRDQQEQVREDMETKCFICGIGSDYFD-STPHGFETHTMEEHNLANYMFFLMYL 3503          
BLAST of mRNA_M-pyrifera_M_contig123375.4785.1 vs. uniprot
Match: UPI0007AC9884 (ryanodine receptor 1-like n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=UPI0007AC9884)

HSP 1 Score: 55.8 bits (133), Expect = 1.120e-7
Identity = 22/54 (40.74%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    1 LREEDEELRQQLRSSCFVCGISADLFDRNSKNGFDRHVREDHAVGQYAQLLMYL 54
            LR++ E++R+ + + CF+CGI +D FD ++ +GF+ H  E+H +  Y   LMYL
Sbjct: 4560 LRDQQEQVREDMETKCFICGIGSDYFD-STPHGFETHTMEEHNLANYMFFLMYL 4612          
BLAST of mRNA_M-pyrifera_M_contig123375.4785.1 vs. uniprot
Match: UPI0007B94FA9 (ryanodine receptor 1-like isoform X3 n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=UPI0007B94FA9)

HSP 1 Score: 55.8 bits (133), Expect = 1.120e-7
Identity = 22/54 (40.74%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    1 LREEDEELRQQLRSSCFVCGISADLFDRNSKNGFDRHVREDHAVGQYAQLLMYL 54
            LR++ E++R+ + + CF+CGI +D FD ++ +GF+ H  E+H +  Y   LMYL
Sbjct: 4605 LRDQQEQVREDMETKCFICGIGSDYFD-STPHGFETHTMEEHNLANYMFFLMYL 4657          
BLAST of mRNA_M-pyrifera_M_contig123375.4785.1 vs. uniprot
Match: UPI0007B83275 (ryanodine receptor 1-like isoform X2 n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=UPI0007B83275)

HSP 1 Score: 55.8 bits (133), Expect = 1.120e-7
Identity = 22/54 (40.74%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    1 LREEDEELRQQLRSSCFVCGISADLFDRNSKNGFDRHVREDHAVGQYAQLLMYL 54
            LR++ E++R+ + + CF+CGI +D FD ++ +GF+ H  E+H +  Y   LMYL
Sbjct: 4615 LRDQQEQVREDMETKCFICGIGSDYFD-STPHGFETHTMEEHNLANYMFFLMYL 4667          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123375.4785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00189E5DF15.990e-842.59LOW QUALITY PROTEIN: ryanodine receptor 1 n=1 Tax=... [more]
A0A7S1IMJ2_9EUGL1.110e-740.74Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A5A9P1E4_9TELE1.120e-740.74Ryanodine receptor 1 n=1 Tax=Triplophysa tibetana ... [more]
A0A3N0XCL1_ANAGA1.120e-740.74Ryanodine receptor 1 n=1 Tax=Anabarilius grahami T... [more]
A0A7S1IMD9_9EUGL1.120e-740.74Hypothetical protein n=2 Tax=Eutreptiella gymnasti... [more]
A0A7J6C6N0_9TELE1.120e-740.74Uncharacterized protein n=1 Tax=Onychostoma macrol... [more]
A0A553QEV1_9TELE1.120e-740.74B30.2/SPRY domain-containing protein (Fragment) n=... [more]
UPI0007AC98841.120e-740.74ryanodine receptor 1-like n=1 Tax=Sinocyclocheilus... [more]
UPI0007B94FA91.120e-740.74ryanodine receptor 1-like isoform X3 n=1 Tax=Sinoc... [more]
UPI0007B832751.120e-740.74ryanodine receptor 1-like isoform X2 n=1 Tax=Sinoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig123375contigM-pyrifera_M_contig123375:43..204 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig123375.4785.1mRNA_M-pyrifera_M_contig123375.4785.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig123375 43..204 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig123375.4785.1 ID=prot_M-pyrifera_M_contig123375.4785.1|Name=mRNA_M-pyrifera_M_contig123375.4785.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=54bp
LREEDEELRQQLRSSCFVCGISADLFDRNSKNGFDRHVREDHAVGQYAQL
LMYL
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