mRNA_M-pyrifera_M_contig123353.4781.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123353.4781.1 vs. uniprot
Match: A0A7S4NE97_9EUKA (Coronin n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4NE97_9EUKA) HSP 1 Score: 160 bits (406), Expect = 1.470e-42 Identity = 85/174 (48.85%), Postives = 116/174 (66.67%), Query Frame = 1
Query: 1 GFGGNSERQFCVWDTRAFGS-PLAT-VAVDNLSGVISPIFDEANGVVYLAGKGDGTVSYYELTDEAPHAHLLSKFVTAEPQMGLGVLPRRTNDVRKVELLRCLKLTTKEVQPLSFSVPRTRTEFFQDDLFPPAPSASPALSAAAWLAGENAAPLLQSLQPEGMTALSAAPAIKR 516
GFG +++R+ +WD+R GS PLA VD +++P +D + VV+LA KGDGT+ ++E+TDEAP H L+K+ T PQMG+ LP++T DV+KVE+ R LKLT V P+SF+VPRTR EFFQDD++ P P ++A AW G A L+P GM LS APAI+R
Sbjct: 676 GFGRSADRELGLWDSRKLGSGPLAPFTTVDQAQALLTPYYDHDHRVVWLAAKGDGTIPFFEVTDEAPFFHYLNKYPTNVPQMGVARLPKKTYDVKKVEICRVLKLTIDTVIPVSFTVPRTRKEFFQDDIYCPTWDEKPVMNADAWFGGSTQARKTVDLKPAGMELLSKAPAIER 849
BLAST of mRNA_M-pyrifera_M_contig123353.4781.1 vs. uniprot
Match: A0A2P6MSW5_9EUKA (Coronin n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MSW5_9EUKA) HSP 1 Score: 157 bits (396), Expect = 2.440e-42 Identity = 73/152 (48.03%), Postives = 108/152 (71.05%), Query Frame = 1
Query: 16 SERQFCVWDTRAFGSPLATVAVDNLSGVISPIFDEANGVVYLAGKGDGTVSYYELTDEAPHAHLLSKFVTAEPQMGLGVLPRRTNDVRKVELLRCLKLTTKEVQPLSFSVPRTRTEFFQDDLFPPAPSASPALSAAAWLAGENAAPLLQSLQ 471
SER++C+WD R F PL+ +VD+ SGV+ P +D V++L GKGDG + Y+E+TDEAP+ LS+F + PQ GL ++P+RT +V + E++R LKL K ++P+SF VPR +++ FQDDL+P APS P+L+ WL+G+NA P S+Q
Sbjct: 307 SEREYCLWDPRDFSKPLSRTSVDSASGVLMPFYDNDTSVLFLGGKGDGNIRYFEVTDEAPYIFPLSEFKSNNPQRGLALMPKRTVNVSECEIVRILKLGVKTLEPISFLVPR-KSDIFQDDLYPDAPSGEPSLTGDEWLSGKNANPKTASMQ 457
BLAST of mRNA_M-pyrifera_M_contig123353.4781.1 vs. uniprot
Match: F4PPL5_CAVFA (Coronin n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PPL5_CAVFA) HSP 1 Score: 154 bits (389), Expect = 8.470e-42 Identity = 73/158 (46.20%), Postives = 101/158 (63.92%), Query Frame = 1
Query: 1 GFGGNSERQFCVWDTRAFGSPLATVAVDNLSGVISPIFDEANGVVYLAGKGDGTVSYYELTDEAPHAHLLSKFVTAEPQMGLGVLPRRTNDVRKVELLRCLKLTTKEVQPLSFSVPRTRTEFFQDDLFPPAPSASPALSAAAWLAGENAAPLLQSLQP 474
GF SER+F +WD R P+ VD SG++ P +D+ N ++Y+ GKGDG + YYE+ DEAP+ H LS+F +A PQ G+ LP+R +V + E+ R LK+TT V+P+SF PR R++ FQDDLFP + L A+ W AG+NA P SL P
Sbjct: 234 GFSKTSEREFKIWDPRNIAEPITATVVDTASGLLMPFYDQDNSILYMVGKGDGNIRYYEMVDEAPYFHFLSEFKSATPQRGVCFLPKRALNVSECEIARALKVTTNGVEPISFRAPR-RSDIFQDDLFPDTYAGEAVLEASQWAAGQNAEPKTMSLAP 390
BLAST of mRNA_M-pyrifera_M_contig123353.4781.1 vs. uniprot
Match: D3B210_POLPP (Coronin n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B210_POLPP) HSP 1 Score: 153 bits (387), Expect = 1.660e-41 Identity = 74/158 (46.84%), Postives = 105/158 (66.46%), Query Frame = 1
Query: 1 GFGGNSERQFCVWDTRAFGSPLATVAVDNLSGVISPIFDEANGVVYLAGKGDGTVSYYELTDEAPHAHLLSKFVTAEPQMGLGVLPRRTNDVRKVELLRCLKLTTKEVQPLSFSVPRTRTEFFQDDLFPPAPSASPALSAAAWLAGENAAPLLQSLQP 474
GF SER+F ++D R F PL TV +D+ SG++ P FD N ++Y+AGKGDG + YYE+ +EAP+ + LS+F +A PQ G+ +P+R +V + E+ R LK+T V+P+SF VPR +++ FQDDL+P + P L AAAW G NA P SL P
Sbjct: 233 GFSKTSEREFKIFDPRTFAEPLTTVTIDSASGLLMPFFDPDNSILYMAGKGDGNIRYYEMVNEAPYHYYLSEFKSATPQRGICFIPKRAVNVSECEIARALKVTPTTVEPISFRVPR-KSDIFQDDLYPDTYAGEPVLDAAAWAGGANAEPKTCSLAP 389
BLAST of mRNA_M-pyrifera_M_contig123353.4781.1 vs. uniprot
Match: UPI000644F445 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644F445) HSP 1 Score: 153 bits (387), Expect = 1.690e-41 Identity = 73/158 (46.20%), Postives = 105/158 (66.46%), Query Frame = 1
Query: 1 GFGGNSERQFCVWDTRAFGSPLATVAVDNLSGVISPIFDEANGVVYLAGKGDGTVSYYELTDEAPHAHLLSKFVTAEPQMGLGVLPRRTNDVRKVELLRCLKLTTKEVQPLSFSVPRTRTEFFQDDLFPPAPSASPALSAAAWLAGENAAPLLQSLQP 474
GF SER+F ++D R F PL T ++D+ SG++ P FD N ++YLAGKGDG + YYE+ EAP+ H LS+F TA PQ G+ +P+R +V + E+ R LK+T V+P+SF VPR +++ FQDDL+P + P L++ AW +G NA P S+ P
Sbjct: 234 GFSKTSEREFKIYDPRNFTDPLTTTSIDSASGLLMPFFDADNSILYLAGKGDGNIRYYEMVSEAPYFHYLSEFKTASPQRGICFIPKRACNVSECEIARALKVTPSTVEPISFRVPR-KSDIFQDDLYPDTYAGEPVLTSQAWASGSNAEPKTCSMAP 390
BLAST of mRNA_M-pyrifera_M_contig123353.4781.1 vs. uniprot
Match: A0A151Z5Q3_9MYCE (Coronin n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z5Q3_9MYCE) HSP 1 Score: 157 bits (398), Expect = 1.780e-41 Identity = 73/168 (43.45%), Postives = 111/168 (66.07%), Query Frame = 1
Query: 1 GFGGNSERQFCVWDTRAFGSPLATVAVDNLSGVISPIFDEANGVVYLAGKGDGTVSYYELTDEAPHAHLLSKFVTAEPQMGLGVLPRRTNDVRKVELLRCLKLTTKEVQPLSFSVPRTRTEFFQDDLFPPAPSASPALSAAAWLAGENAAPLLQSLQPEGMTALSAAP 504
GF +SER++ +WD+R + ++T +D+LSGVI+P FDE VV+LAGKGDGT+ YE+ + P+ H L+++ + PQ+G+ ++ +V+K E+ R K+T ++P+ ++PR R EFFQDD++PP S P +++ W AGE AP SL PEGM LS AP
Sbjct: 700 GFNKSSEREYQLWDSRNLNNYMSTAVLDHLSGVITPYFDEDTSVVFLAGKGDGTIRSYEINENEPYVHFLNEYSSGTPQIGVAQCQKQCVNVKKCEVARFYKVTDSTIEPIQMTIPRNRMEFFQDDIYPPTRSTKPVMTSDQWFAGETKAPTTVSLCPEGMVPLSKAP 867
BLAST of mRNA_M-pyrifera_M_contig123353.4781.1 vs. uniprot
Match: F1A1A0_DICPU (Coronin n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A1A0_DICPU) HSP 1 Score: 157 bits (396), Expect = 3.390e-41 Identity = 76/169 (44.97%), Postives = 116/169 (68.64%), Query Frame = 1
Query: 1 GFGGNSERQFCVWDTRAFGSPLATVAVDNLSGVISPIFDEANGVVYLAGKGDGTVSYYELTDEAPHAHLLSKFVTAEPQMGLGVLPRRT-NDVRKVELLRCLKLTTKEVQPLSFSVPRTRTEFFQDDLFPPAPSASPALSAAAWLAGENAAPLLQSLQPEGMTALSAAP 504
GF +SER++ +WD+R S L +D LSGVI+P +DE +GVVYLAGKGDG++ +E+ +E P+ H L+++ + PQ+G+ + ++T DV+K E+ R K+T ++P+S +VPR RTEFFQDD++P S +P++++ W GE + SLQP+GM ALS AP
Sbjct: 711 GFNKSSEREYQLWDSRNLSSHLVEKKIDQLSGVITPFYDEDSGVVYLAGKGDGSIRMFEINNEDPYVHYLTEYNSGSPQIGVAKVSQKTLMDVKKCEISRFYKVTADTIEPISMTVPRNRTEFFQDDIYPDTRSGNPSMTSEEWFNGETRQCEMVSLQPQGMVALSNAP 879
BLAST of mRNA_M-pyrifera_M_contig123353.4781.1 vs. uniprot
Match: A0A151NVI8_ALLMI (Uncharacterized protein n=1 Tax=Alligator mississippiensis TaxID=8496 RepID=A0A151NVI8_ALLMI) HSP 1 Score: 146 bits (369), Expect = 5.830e-41 Identity = 67/152 (44.08%), Postives = 103/152 (67.76%), Query Frame = 1
Query: 16 SERQFCVWDTRAFGSPLATVAVDNLSGVISPIFDEANGVVYLAGKGDGTVSYYELTDEAPHAHLLSKFVTAEPQMGLGVLPRRTNDVRKVELLRCLKLTTKEVQPLSFSVPRTRTEFFQDDLFPPAPSASPALSAAAWLAGENAAPLLQSLQ 471
SERQ +WD ++F P+A +D +GV+ P +D + +VYL GKGD ++ Y+E+TDE P+ H LS + + EPQ G+G +P+R DV K E+ R KL ++ +P++ +VPR +++ FQDDL+P P PAL A WL+G++A P+L SL+
Sbjct: 2 SERQLALWDLKSFEEPIALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITDEPPYVHYLSTYSSKEPQRGMGFMPKRGLDVSKCEIARFFKLHERKCEPIAMTVPR-KSDLFQDDLYPDTPGPEPALEADEWLSGKDAEPILVSLR 152
BLAST of mRNA_M-pyrifera_M_contig123353.4781.1 vs. uniprot
Match: F0ZVC2_DICPU (Coronin n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZVC2_DICPU) HSP 1 Score: 150 bits (380), Expect = 2.150e-40 Identity = 69/156 (44.23%), Postives = 104/156 (66.67%), Query Frame = 1
Query: 1 GFGGNSERQFCVWDTRAFGSPLATVAVDNLSGVISPIFDEANGVVYLAGKGDGTVSYYELTDEAPHAHLLSKFVTAEPQMGLGVLPRRTNDVRKVELLRCLKLTTKEVQPLSFSVPRTRTEFFQDDLFPPAPSASPALSAAAWLAGENAAPLLQSL 468
GF SER+ +WD R F P+ + +D+ SG++ P +D N ++Y+AGKGDG + YYE+ DE+P+ H LS+F TA PQ GL +P+R + + E+ R LK+TT V+P++F VPR +++ FQDD+FP + P+L+A W +G+NA P SL
Sbjct: 245 GFSKTSERELNMWDPRNFAEPITHLNIDSASGLLMPFYDPDNSILYMAGKGDGNIRYYEVVDESPYLHFLSEFKTATPQRGLCFVPKRALQINECEIARALKVTTNSVEPIAFKVPR-KSDIFQDDIFPDTYAGEPSLTAEQWASGQNAEPKTISL 399
BLAST of mRNA_M-pyrifera_M_contig123353.4781.1 vs. uniprot
Match: D3BC07_POLPP (Coronin n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BC07_POLPP) HSP 1 Score: 154 bits (389), Expect = 2.930e-40 Identity = 76/169 (44.97%), Postives = 112/169 (66.27%), Query Frame = 1
Query: 1 GFGGNSERQFCVWDTRAFGS-PLATVAVDNLSGVISPIFDEANGVVYLAGKGDGTVSYYELTDEAPHAHLLSKFVTAEPQMGLGVLPRRTNDVRKVELLRCLKLTTKEVQPLSFSVPRTRTEFFQDDLFPPAPSASPALSAAAWLAGENAAPLLQSLQPEGMTALSAAP 504
GF +SER++ +WD+R FG+ P+ T D+L+GVI+P +DE GVVYL GKGDG++ E+ D+ P+ H L+++ + PQMG+ + + +++K E+ R K++ V+PL FSVPRTRTEFFQDD+F P ++P +SA W G + P SL P M+ LS AP
Sbjct: 694 GFNKSSEREYQLWDSRNFGAGPMTTGVFDHLAGVITPYYDEDTGVVYLVGKGDGSIRMMEINDQEPYVHFLTEYSSGVPQMGVAPVSKHLLNIKKCEIARFFKVSDTTVEPLQFSVPRTRTEFFQDDIFVPTRVSTPTMSADEWFNGASVEPERVSLCPSDMSPLSTAP 862 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123353.4781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123353.4781.1 >prot_M-pyrifera_M_contig123353.4781.1 ID=prot_M-pyrifera_M_contig123353.4781.1|Name=mRNA_M-pyrifera_M_contig123353.4781.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp GFGGNSERQFCVWDTRAFGSPLATVAVDNLSGVISPIFDEANGVVYLAGKback to top mRNA from alignment at M-pyrifera_M_contig123353:2..517+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123353.4781.1 ID=mRNA_M-pyrifera_M_contig123353.4781.1|Name=mRNA_M-pyrifera_M_contig123353.4781.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig123353:2..517+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123353:2..517+ >mRNA_M-pyrifera_M_contig123353.4781.1 ID=mRNA_M-pyrifera_M_contig123353.4781.1|Name=mRNA_M-pyrifera_M_contig123353.4781.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1032bp|location=Sequence derived from alignment at M-pyrifera_M_contig123353:2..517+ (Macrocystis pyrifera P11B4 male)back to top |