prot_M-pyrifera_M_contig12297.4719.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig12297.4719.1
Unique Name	prot_M-pyrifera_M_contig12297.4719.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	105

Homology

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BLAST of mRNA_M-pyrifera_M_contig12297.4719.1 vs. uniprot
Match: A0A6H5KJ01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ01_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 1.820e-20
Identity = 56/123 (45.53%), Postives = 70/123 (56.91%), Query Frame = 0

Query:    1 QFVLPRVTVREAG----EESRLSGLVLTFVYAAGDIVRVRSDPVY-----------GKMKEDDD-------GSHD--FDIEYRWKRLPEEDEQAGIWLIFAVSLIVTTFLAVDACNSPSGEQE 99
            QFVL RV +RE G    E  RL  LV+TF  A G+IV++RSDPVY           G  K + D       G  D  F +EYRW  LPEED QAG+W +   SL+VT  LAVD CNS + +++
Sbjct:  104 QFVLRRVMLREEGSGNEEGRRLKRLVVTFACAGGEIVKIRSDPVYACRTVVGPLFGGLSKANGDTAATATAGGEDPGFQVEYRWDHLPEEDAQAGLWFLLFASLVVTAVLAVDVCNSTAEDRD 226

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig12297.4719.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig12297.4719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5KJ01_9PHAE	1.820e-20	45.53	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..69
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 70..88
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 89..105
None	No IPR available	TMHMM	TMhelix		coord: 70..88

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig12297	contig	M-pyrifera_M_contig12297:3995..5296 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig12297.4719.1	mRNA_M-pyrifera_M_contig12297.4719.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig12297 3995..5296 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig12297.4719.1 ID=prot_M-pyrifera_M_contig12297.4719.1|Name=mRNA_M-pyrifera_M_contig12297.4719.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=105bp
QFVLPRVTVREAGEESRLSGLVLTFVYAAGDIVRVRSDPVYGKMKEDDDG
SHDFDIEYRWKRLPEEDEQAGIWLIFAVSLIVTTFLAVDACNSPSGEQES
SRRSG