prot_M-pyrifera_M_contig122703.4664.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig122703.4664.1
Unique Nameprot_M-pyrifera_M_contig122703.4664.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length145
Homology
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Match: A0A165HHX9_EXIGL (DNA polymerase (Fragment) n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165HHX9_EXIGL)

HSP 1 Score: 75.1 bits (183), Expect = 6.030e-13
Identity = 49/136 (36.03%), Postives = 69/136 (50.74%), Query Frame = 0
Query:    2 CGELLSPVAISNQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGGSARCTMPGCKGYVFQEYTSEALLTQLQYLQALFSLDRFREKHTDENSEERLHAEAYASTW-RGLEEEVLLYLKHNARNHIDCGSLFS 136
            C   L   ++  Q+ + +   IA+YY   +VC+DS+C HRTR + + G   RC  P C G V  EY+  AL TQL Y ++LF  D+   K      EE     A   T  + L+  V  +L  N R+ +D G LFS
Sbjct: 1268 CKTQLQIPSVQTQLEVQIRDHIARYYQMWMVCQDSTCGHRTRMMGVYG--KRCLRPTCAGSVVMEYSDLALYTQLLYYRSLFDGDKAVNKAKGAKQEELRALVALNHTMLQALQASVDRFLDMNGRHWVDMGELFS 1401          
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Match: UPI00142562F2 (DNA polymerase alpha catalytic subunit-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142562F2)

HSP 1 Score: 72.4 bits (176), Expect = 5.280e-12
Identity = 37/87 (42.53%), Postives = 55/87 (63.22%), Query Frame = 0
Query:   11 ISNQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGGSARCTMPGCKGYVFQ-EYTSEALLTQLQYLQALFSLDRFREKHTDEN 96
            I NQ+R++V RC+ KYY+  LVCED+SC HRTR V +         P C+  + + EYTS+AL TQL+Y + +F   R  + + D++
Sbjct: 1351 IKNQLRMMVRRCVTKYYDGWLVCEDTSCNHRTRCVPINPQRHGLPCPVCQRALLKPEYTSKALYTQLRYFKFIFDAHRAIQSNKDKS 1437          
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Match: A0A8H3HQI7_9AGAM (DNA polymerase n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3HQI7_9AGAM)

HSP 1 Score: 67.4 bits (163), Expect = 2.930e-10
Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = 0
Query:    2 CGELLSPVAISNQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGGSARCTMPGC--KGYVFQEYTSEALLTQLQYLQALFSLDRFREKH--TDENSEERLHAEAYASTWRGLEEEVLLYLKHNARNHIDCGSLFS 136
            C +  S  ++  Q+   + + I +YY+  +VC+DS+C HRTR + + G   RC  PGC  KG V  EY+   L  QL Y  +LF+ D+  EK   T  N+E        +     + + V  YL   +R  ++ G+LFS
Sbjct: 1318 CSQEFSLASVQVQLETQLRQQINQYYSGWMVCQDSTCGHRTRGMSVYG--ERCLNPGCATKGPVSYEYSDMKLYNQLLYYMSLFNGDKAIEKAAGTSRNAEVMALVGLNSDFLTAMTKCVEKYLNQCSRRWVEMGTLFS 1454          
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Match: A0A7M7NKZ9_STRPU (DNA polymerase n=4 Tax=Echinacea TaxID=7674 RepID=A0A7M7NKZ9_STRPU)

HSP 1 Score: 65.5 bits (158), Expect = 1.370e-9
Identity = 37/126 (29.37%), Postives = 65/126 (51.59%), Query Frame = 0
Query:   11 ISNQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGGSARCTMPGCKGYVFQ-EYTSEALLTQLQYLQALFSLDRFREKHTDENSEERLHAEAYASTWRGLEEEVLLYLKHNARNHIDCGSLF 135
            + N++RLL    + KYY   L+CED+SC HRTR + L         P C+  V + EY+ + L TQL + Q +F  ++   ++ D+         +  + ++ L++ + + L  NA + +D   LF
Sbjct: 1353 LGNKLRLLTRSYVQKYYAGWLICEDTSCAHRTRRLPLNPHRQGFVCPVCQRAVLRPEYSDKELYTQLCFFQTIFDYEKALTENNDKAKSRSQEPASVRAAYQTLKQIIDVRLAANAYSEVDLSKLF 1478          
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Match: UPI0018D8091E (DNA polymerase alpha catalytic subunit-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D8091E)

HSP 1 Score: 64.7 bits (156), Expect = 2.550e-9
Identity = 42/137 (30.66%), Postives = 71/137 (51.82%), Query Frame = 0
Query:   13 NQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGGSARCTMPGCKGYVFQ-EYTSEALLTQLQYLQALFSLDRFREKHTDE-----NSEERLHAEAYASTWRGLEEEVLLYLKHNARNHIDCGSLFSVFAGLAL 143
            N++ LL+   I KYY   +VCED+SC H+TR   L         P C+  + + EYT + L  Q+ +LQ++F +DR  ++ T+      N   R H ++Y+     ++++    L+ N  + +D   LFS  + L L
Sbjct: 1377 NRLNLLIRGYIQKYYAGWMVCEDTSCAHKTRRTPLNPQRQGFMCPVCQRAILKPEYTDKDLYYQMSFLQSIFDVDRAMKRLTENEKTFANMALRDHLDSYSRLRNFMDKK----LRQNKYSEVDLSRLFSGMSTLVL 1509          
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Match: A0A1E3P9G2_WICAA (DNA polymerase n=1 Tax=Wickerhamomyces anomalus (strain ATCC 58044 / CBS 1984 / NCYC 433 / NRRL Y-366-8) TaxID=683960 RepID=A0A1E3P9G2_WICAA)

HSP 1 Score: 63.5 bits (153), Expect = 6.400e-9
Identity = 41/148 (27.70%), Postives = 69/148 (46.62%), Query Frame = 0
Query:    2 CGELLSPVAISNQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGGSARCTMPGCKGYVFQEYTSEALLTQLQYLQALFSLDR-----FREKHTDENSEERLH---------AEAYASTWRGLEEEVLLYLKHNARNHIDCGSLF 135
            C   +S + +S+Q+   +   IAKYY  V+VC+DS+C   T+ + + G   RC   GCKG +  +Y+ + L  QL Y  +LF + +      R  +  E+  +            +E     +   +  V  YL    R ++D GS+F
Sbjct: 1229 CESQISTLGVSSQLEHRIRSFIAKYYQGVVVCDDSTCGMTTKQISVYG--KRCLSHGCKGVMRYKYSDKELYNQLLYFDSLFDVSKNKTQSLRPLYDSEDKSQPTPMIKGQIDALSEQNRENFEVFKSVVQKYLSDCGRRYVDMGSMF 1374          
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Match: UPI0014550DCC (DNA polymerase alpha catalytic subunit-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014550DCC)

HSP 1 Score: 63.2 bits (152), Expect = 8.760e-9
Identity = 45/139 (32.37%), Postives = 70/139 (50.36%), Query Frame = 0
Query:   11 ISNQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGGSARCTMPGCKGYVFQ-EYTSEALLTQLQYLQALFSLDRFREKHTDENS-----EERLHAEAYASTWRGLEEEVLLYLKHNARNHIDCGSLFSVFAGLAL 143
            +SN++ LL+   I +YY   +VCED+SC HRTR   L         P C+  V + EYT ++L  QL + Q++F +DR  +K ++          R H E YA     L+++    LK +  + +D   LFS    + L
Sbjct: 1371 MSNRLNLLIRGYIQRYYAGWMVCEDTSCAHRTRRTPLNPQRQGFICPVCQRAVLKPEYTDKSLYYQLSFFQSIFDVDRAIKKLSEGEKGFASVAVRDHLENYARLRNFLDKK----LKQSKYSEVDLTRLFSGLTTMVL 1505          
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Match: A0A7L3LGT0_9CHAR (DNA polymerase (Fragment) n=5 Tax=Neognathae TaxID=8825 RepID=A0A7L3LGT0_9CHAR)

HSP 1 Score: 62.8 bits (151), Expect = 1.190e-8
Identity = 41/140 (29.29%), Postives = 76/140 (54.29%), Query Frame = 0
Query:    9 VAISNQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGGSARCTMPGCKGYVFQ-EYTSEALLTQLQYLQALF----SLDRFREKHTDENSEERLHAEAYASTWRGLEEEVLLYLKHNARNHIDCGSLFSVFAGLAL 143
            V ++N++ L + RCI KYYN  L+CE+ +C +RTR + L    +      CK  V + EY+ +AL TQL + + +F    ++D+   +   E S++ +  E  +  ++ L+  V   L  +  + ++ G LF++  G A+
Sbjct: 1343 VQMNNKLLLDIRRCIRKYYNGWLICEEPTCRNRTRQLPLNFSRSGPMCQACKKAVLRPEYSDKALYTQLCFYRYIFDVDYAVDKVAAEEGKEYSKKNMRPEI-SEAYKSLKSTVDKCLSTSGYSEVNLGKLFTISIGRAV 1481          
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Match: A0A8I2YDY3_9AGAM (DNA-directed DNA polymerase n=1 Tax=Boletus reticuloceps TaxID=495285 RepID=A0A8I2YDY3_9AGAM)

HSP 1 Score: 61.2 bits (147), Expect = 3.720e-8
Identity = 42/141 (29.79%), Postives = 64/141 (45.39%), Query Frame = 0
Query:    2 CGELLSPVAISNQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGGSARCTMPGCKGYVFQ----EYTSEALLTQLQYLQALFSLDRFREKHTDENS---EERLHAEAYASTWRGLEEEVLLYLKHNARNHIDCGSLF 135
            C  L    ++  Q+ + +  CIA+YY   +VC D++C HRTR++ + G    C  PGC          EY    L  QL+Y   LF  D+ + K T  N+   E R+  E   +    +   V  Y+    R  +D  +LF
Sbjct:  446 CNHLFGRASLQTQLEVQIRACIARYYQAWIVCNDTTCGHRTRSMSVYG--RHCVRPGCPSASDSSARLEYPDVELYNQLRYFAMLFDADKAK-KATIGNARFDEVRVLTETNQTFLEAMSGTVDKYINQCGRRWVDFKALF 583          
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Match: A0A287CT85_ICTTR (DNA polymerase n=1 Tax=Ictidomys tridecemlineatus TaxID=43179 RepID=A0A287CT85_ICTTR)

HSP 1 Score: 61.2 bits (147), Expect = 3.870e-8
Identity = 38/139 (27.34%), Postives = 73/139 (52.52%), Query Frame = 0
Query:    3 GELLSPVAISNQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGGSARCTMPGC-KGYVFQEYTSEALLTQLQYLQALFSLDRFREKHTDENSEERLHAEAYA----STWRGLEEEVLLYLKHNARNHIDCGSLFS 136
              L   V +SN++ + + RCI KYY+  L+CE+++C +RTR + L+        P C K  +  EY+ ++L TQL + + +F +D   EK   ++ +E+L  + +       +R L+     +L  +  + ++   LF+
Sbjct:  623 SPLTFTVQMSNKLIMDIRRCIKKYYDGWLICEEAACRNRTRHLPLQFSRNGPLCPACMKAILKPEYSDKSLYTQLCFYRYIFDVDYALEKLITDHEKEKLKKQFFTPKVLQDYRKLKNTAEQFLSWSGYSEVNLSKLFA 761          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122703.4664.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A165HHX9_EXIGL6.030e-1336.03DNA polymerase (Fragment) n=1 Tax=Exidia glandulos... [more]
UPI00142562F25.280e-1242.53DNA polymerase alpha catalytic subunit-like n=1 Ta... [more]
A0A8H3HQI7_9AGAM2.930e-1033.09DNA polymerase n=1 Tax=Rhizoctonia solani TaxID=45... [more]
A0A7M7NKZ9_STRPU1.370e-929.37DNA polymerase n=4 Tax=Echinacea TaxID=7674 RepID=... [more]
UPI0018D8091E2.550e-930.66DNA polymerase alpha catalytic subunit-like n=1 Ta... [more]
A0A1E3P9G2_WICAA6.400e-927.70DNA polymerase n=1 Tax=Wickerhamomyces anomalus (s... [more]
UPI0014550DCC8.760e-932.37DNA polymerase alpha catalytic subunit-like n=1 Ta... [more]
A0A7L3LGT0_9CHAR1.190e-829.29DNA polymerase (Fragment) n=5 Tax=Neognathae TaxID... [more]
A0A8I2YDY3_9AGAM3.720e-829.79DNA-directed DNA polymerase n=1 Tax=Boletus reticu... [more]
A0A287CT85_ICTTR3.870e-827.34DNA polymerase n=1 Tax=Ictidomys tridecemlineatus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038256DNA polymerase alpha, zinc finger domain superfamilyGENE3D1.10.3200.20coord: 1..131
e-value: 1.4E-26
score: 94.9
IPR015088Zinc finger, DNA-directed DNA polymerase, family B, alphaPFAMPF08996zf-DNA_Polcoord: 1..135
e-value: 3.1E-29
score: 102.1
NoneNo IPR availablePANTHERPTHR45861FAMILY NOT NAMEDcoord: 10..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig122703contigM-pyrifera_M_contig122703:81..515 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig122703.4664.1mRNA_M-pyrifera_M_contig122703.4664.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig122703 81..515 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig122703.4664.1 ID=prot_M-pyrifera_M_contig122703.4664.1|Name=mRNA_M-pyrifera_M_contig122703.4664.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=145bp
SCGELLSPVAISNQVRLLVHRCIAKYYNNVLVCEDSSCCHRTRAVLLKGG
SARCTMPGCKGYVFQEYTSEALLTQLQYLQALFSLDRFREKHTDENSEER
LHAEAYASTWRGLEEEVLLYLKHNARNHIDCGSLFSVFAGLALS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038256Pol_alpha_znc_sf
IPR015088Znf_DNA-dir_DNA_pol_B_alpha