mRNA_M-pyrifera_M_contig122530.4639.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122530.4639.1 vs. uniprot
Match: UPI001FF3A32E (acyl-CoA dehydrogenase family protein n=1 Tax=Kordiimonas sp. 5E331 TaxID=2917717 RepID=UPI001FF3A32E) HSP 1 Score: 243 bits (621), Expect = 2.400e-77 Identity = 116/156 (74.36%), Postives = 135/156 (86.54%), Query Frame = 1
Query: 1 LMGEQDRGFLAIMNNFNYERLYMAAQMLGMSRRCLAESIAYAQTRETFGQPLIRHQVIRHKIAEMSSRIDAMEGLLNQICWNVNEGDMPVAEICKAKFFCSTALEYCASEAMQIFGGAGYLRGNPVERIYRETKVMTIGGGSAEIMRDLAVKQMGL 468
++G+++ GFL+IMNNFNYERL M QM+GM+ RCL ESI YAQ RETFG+P+I+HQVIRHKIA+MS++ID+M LNQICW +NEGDMPV +I KAKF S LEYCASEAMQIFGGAGYLRGNPVERIYR+ KVM IGGGS EIMRDLAV+QMGL
Sbjct: 228 MLGQENMGFLSIMNNFNYERLMMVGQMIGMAERCLDESIKYAQDRETFGKPMIKHQVIRHKIADMSAKIDSMAAWLNQICWMINEGDMPVEQITKAKFSASKMLEYCASEAMQIFGGAGYLRGNPVERIYRDVKVMAIGGGSEEIMRDLAVRQMGL 383
BLAST of mRNA_M-pyrifera_M_contig122530.4639.1 vs. uniprot
Match: A0A3D1RVC4_9GAMM (Acyl-CoA dehydrogenase n=3 Tax=root TaxID=1 RepID=A0A3D1RVC4_9GAMM) HSP 1 Score: 241 bits (616), Expect = 1.250e-76 Identity = 119/156 (76.28%), Postives = 135/156 (86.54%), Query Frame = 1
Query: 1 LMGEQDRGFLAIMNNFNYERLYMAAQMLGMSRRCLAESIAYAQTRETFGQPLIRHQVIRHKIAEMSSRIDAMEGLLNQICWNVNEGDMPVAEICKAKFFCSTALEYCASEAMQIFGGAGYLRGNPVERIYRETKVMTIGGGSAEIMRDLAVKQMGL 468
LMGEQD GF+AIM NFN ER+ + A LGM R CLAESI +AQ+R+TFG+PLIRHQVIRHKIA+MS+RIDA+E LNQICW VN G+MPVAEICKAKFF + AL +CA+EA+QI GGAGYLRGNPVERIYRE KVM IGGGS EIMRDLAV+QMGL
Sbjct: 225 LMGEQDLGFIAIMENFNLERVALIAGALGMMRVCLAESIDWAQSRQTFGKPLIRHQVIRHKIADMSARIDALEAYLNQICWIVNSGEMPVAEICKAKFFATRALAFCANEAIQILGGAGYLRGNPVERIYREVKVMAIGGGSEEIMRDLAVRQMGL 380
BLAST of mRNA_M-pyrifera_M_contig122530.4639.1 vs. uniprot
Match: A0A1G8SQK7_9RHOB (Acyl-CoA dehydrogenase n=1 Tax=Lutimaribacter saemankumensis TaxID=490829 RepID=A0A1G8SQK7_9RHOB) HSP 1 Score: 239 bits (611), Expect = 7.110e-76 Identity = 117/156 (75.00%), Postives = 133/156 (85.26%), Query Frame = 1
Query: 1 LMGEQDRGFLAIMNNFNYERLYMAAQMLGMSRRCLAESIAYAQTRETFGQPLIRHQVIRHKIAEMSSRIDAMEGLLNQICWNVNEGDMPVAEICKAKFFCSTALEYCASEAMQIFGGAGYLRGNPVERIYRETKVMTIGGGSAEIMRDLAVKQMGL 468
LMGE++RGFL+IM NFNYER+ M A MLGM + C S+A+AQTRETFG+PLIRHQVIRHK+A+MS+RID +E LNQICW NEG MPVAEI KAKF STALE+CAS+AMQI GGAGYLRGNPVER+YRE KV IGGGS EIMRDLAV+QMGL
Sbjct: 225 LMGEENRGFLSIMGNFNYERITMVAIMLGMMKVCFDHSVAWAQTRETFGKPLIRHQVIRHKLADMSARIDMIEAYLNQICWQANEGAMPVAEISKAKFSASTALEFCASQAMQILGGAGYLRGNPVERMYREVKVQAIGGGSEEIMRDLAVRQMGL 380
BLAST of mRNA_M-pyrifera_M_contig122530.4639.1 vs. uniprot
Match: A0A2E9Y462_9PROT (Acyl-CoA dehydrogenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9Y462_9PROT) HSP 1 Score: 238 bits (608), Expect = 2.020e-75 Identity = 117/156 (75.00%), Postives = 132/156 (84.62%), Query Frame = 1
Query: 1 LMGEQDRGFLAIMNNFNYERLYMAAQMLGMSRRCLAESIAYAQTRETFGQPLIRHQVIRHKIAEMSSRIDAMEGLLNQICWNVNEGDMPVAEICKAKFFCSTALEYCASEAMQIFGGAGYLRGNPVERIYRETKVMTIGGGSAEIMRDLAVKQMGL 468
LMGE++ GF+AIM NFN ER+ + AQ LGMS+ CL ESIAYAQ RETF QPLI+HQVIRHKIA+MS++IDA+E LNQICW VNE DMP AEICK KF + LE+CASEAMQIFGGAGYLRGN VER+YRE KVM IGGGS EIMRDLAV+QMGL
Sbjct: 225 LMGEENNGFIAIMKNFNLERVNLIAQALGMSKLCLNESIAYAQERETFNQPLIKHQVIRHKIADMSAKIDAVEAYLNQICWLVNESDMPSAEICKGKFLATKTLEFCASEAMQIFGGAGYLRGNLVERVYREVKVMAIGGGSEEIMRDLAVRQMGL 380
BLAST of mRNA_M-pyrifera_M_contig122530.4639.1 vs. uniprot
Match: UPI001F4EA491 (acyl-CoA dehydrogenase family protein n=1 Tax=Pseudophaeobacter leonis TaxID=1144477 RepID=UPI001F4EA491) HSP 1 Score: 241 bits (614), Expect = 3.970e-75 Identity = 116/156 (74.36%), Postives = 135/156 (86.54%), Query Frame = 1
Query: 1 LMGEQDRGFLAIMNNFNYERLYMAAQMLGMSRRCLAESIAYAQTRETFGQPLIRHQVIRHKIAEMSSRIDAMEGLLNQICWNVNEGDMPVAEICKAKFFCSTALEYCASEAMQIFGGAGYLRGNPVERIYRETKVMTIGGGSAEIMRDLAVKQMGL 468
+MG ++ GFLA+M NFN+ER+ + A MLGM + CL +SIA+AQTRETFG+PLIRHQVIRHKIA+MS+RIDA+E L NQICWN+N+G MPVAEICKAK F S A E+CASEAMQI GGAGYLRGN +ERIYRE KVM IGGGS EIMRDLAV+QMGL
Sbjct: 327 MMGPENTGFLAVMENFNFERVTLIAGMLGMMKTCLEDSIAWAQTRETFGKPLIRHQVIRHKIADMSARIDAVEALQNQICWNINQGTMPVAEICKAKVFTSKACEFCASEAMQIMGGAGYLRGNRIERIYREVKVMAIGGGSEEIMRDLAVRQMGL 482
BLAST of mRNA_M-pyrifera_M_contig122530.4639.1 vs. uniprot
Match: A0A3L7E1M1_9GAMM (Acyl-CoA dehydrogenase n=2 Tax=Seongchinamella TaxID=2919372 RepID=A0A3L7E1M1_9GAMM) HSP 1 Score: 234 bits (598), Expect = 6.510e-74 Identity = 117/156 (75.00%), Postives = 129/156 (82.69%), Query Frame = 1
Query: 1 LMGEQDRGFLAIMNNFNYERLYMAAQMLGMSRRCLAESIAYAQTRETFGQPLIRHQVIRHKIAEMSSRIDAMEGLLNQICWNVNEGDMPVAEICKAKFFCSTALEYCASEAMQIFGGAGYLRGNPVERIYRETKVMTIGGGSAEIMRDLAVKQMGL 468
LMGE++ GF+AIM NFNYERL M A LGM R CL ESIA+AQ R+TFG+PLIRHQ IRHKIAEMS+RID +E N ICW VN+G+MPVAEICK KF + ALEY ASEAMQIFGGA YLRGNPVERIYRE KV IGGGS EIMRDLAV+QMGL
Sbjct: 225 LMGEENHGFIAIMKNFNYERLSMIAGALGMMRTCLEESIAWAQERQTFGKPLIRHQAIRHKIAEMSARIDQIEAYGNMICWQVNKGNMPVAEICKGKFAATRALEYVASEAMQIFGGAAYLRGNPVERIYREVKVFAIGGGSEEIMRDLAVRQMGL 380
BLAST of mRNA_M-pyrifera_M_contig122530.4639.1 vs. uniprot
Match: A0A5B0WVJ6_9GAMM (Acyl-CoA dehydrogenase n=1 Tax=Pseudohalioglobus sp. NY5 TaxID=2606449 RepID=A0A5B0WVJ6_9GAMM) HSP 1 Score: 234 bits (598), Expect = 6.510e-74 Identity = 112/156 (71.79%), Postives = 131/156 (83.97%), Query Frame = 1
Query: 1 LMGEQDRGFLAIMNNFNYERLYMAAQMLGMSRRCLAESIAYAQTRETFGQPLIRHQVIRHKIAEMSSRIDAMEGLLNQICWNVNEGDMPVAEICKAKFFCSTALEYCASEAMQIFGGAGYLRGNPVERIYRETKVMTIGGGSAEIMRDLAVKQMGL 468
LMG ++RGF+AIM NFN+ERL + A +GM + CL ESIAYA+ R TFG+PL+ HQVIRHKIA+MS+R+D +E +N ICW +NEG MPVAEICKAKF + ALE+CASEAMQIFGGAGYLRGNPVERIYRE KV IGGGS EIMRDLAV+QMGL
Sbjct: 225 LMGAENRGFVAIMENFNFERLSLVAGAVGMMKTCLEESIAYARDRHTFGKPLLEHQVIRHKIADMSARVDQVESYMNMICWQINEGAMPVAEICKAKFAATRALEFCASEAMQIFGGAGYLRGNPVERIYREVKVFAIGGGSEEIMRDLAVRQMGL 380
BLAST of mRNA_M-pyrifera_M_contig122530.4639.1 vs. uniprot
Match: A0A368DWS8_9PROT (Acyl-CoA dehydrogenase n=4 Tax=Proteobacteria TaxID=1224 RepID=A0A368DWS8_9PROT) HSP 1 Score: 233 bits (595), Expect = 1.840e-73 Identity = 111/155 (71.61%), Postives = 131/155 (84.52%), Query Frame = 1
Query: 1 LMGEQDRGFLAIMNNFNYERLYMAAQMLGMSRRCLAESIAYAQTRETFGQPLIRHQVIRHKIAEMSSRIDAMEGLLNQICWNVNEGDMPVAEICKAKFFCSTALEYCASEAMQIFGGAGYLRGNPVERIYRETKVMTIGGGSAEIMRDLAVKQMG 465
+MGE+D+GF+ IM NFN ER+ M A LGM + C ESI +A+TRETFG+PLI+HQVIRHK+A MSS+IDA+E L+N ICWN+N G++PVAEI KAKFF + LEYC+SEAMQI GGAGYLRGNPVERIYRE KVM IGGGS EIMRDLAV+QMG
Sbjct: 225 MMGEEDKGFIQIMENFNIERMCMCASSLGMMKVCFEESIEWAKTRETFGKPLIQHQVIRHKLANMSSKIDALEALVNNICWNMNNGEVPVAEISKAKFFATKELEYCSSEAMQIMGGAGYLRGNPVERIYREVKVMAIGGGSEEIMRDLAVRQMG 379
BLAST of mRNA_M-pyrifera_M_contig122530.4639.1 vs. uniprot
Match: UPI001C2790B8 (acyl-CoA dehydrogenase family protein n=1 Tax=Sphingopyxis sp. BSNA05 TaxID=1236614 RepID=UPI001C2790B8) HSP 1 Score: 229 bits (583), Expect = 1.850e-73 Identity = 111/156 (71.15%), Postives = 130/156 (83.33%), Query Frame = 1
Query: 1 LMGEQDRGFLAIMNNFNYERLYMAAQMLGMSRRCLAESIAYAQTRETFGQPLIRHQVIRHKIAEMSSRIDAMEGLLNQICWNVNEGDMPVAEICKAKFFCSTALEYCASEAMQIFGGAGYLRGNPVERIYRETKVMTIGGGSAEIMRDLAVKQMGL 468
++GE+ RGF+ IM+NFN+ERL M AQ LGM R L SI YAQ RETFG+PLI+HQVIRHKIA+MS+R+D ++G LNQICW +G+MPVA++CKAKF + LEYCASEAMQI GGAGYLRGNPVER YRE KVM IGGGS EIMRDLAV+QMGL
Sbjct: 87 MLGEEGRGFIQIMHNFNHERLGMVAQSLGMMRVLLEYSIDYAQQRETFGKPLIKHQVIRHKIADMSARVDRLDGWLNQICWLAEQGEMPVAQLCKAKFSATKDLEYCASEAMQILGGAGYLRGNPVERFYREVKVMAIGGGSEEIMRDLAVRQMGL 242
BLAST of mRNA_M-pyrifera_M_contig122530.4639.1 vs. uniprot
Match: UPI00174A3010 (acyl-CoA dehydrogenase family protein n=1 Tax=Kordiimonas sediminis TaxID=1735581 RepID=UPI00174A3010) HSP 1 Score: 233 bits (594), Expect = 2.610e-73 Identity = 113/156 (72.44%), Postives = 133/156 (85.26%), Query Frame = 1
Query: 1 LMGEQDRGFLAIMNNFNYERLYMAAQMLGMSRRCLAESIAYAQTRETFGQPLIRHQVIRHKIAEMSSRIDAMEGLLNQICWNVNEGDMPVAEICKAKFFCSTALEYCASEAMQIFGGAGYLRGNPVERIYRETKVMTIGGGSAEIMRDLAVKQMGL 468
++G+++ GF+AIMNNFNYERL M A +GM + CL +SIA+AQ R TFG+PLI+HQVIRHKIA+MS++IDA E LNQICW NEG+MPVAE+ KAKFF + ALE+CASEAMQI GGAGYLRGN VERIYRE KVM IGGGS EIMRDLAV+QMGL
Sbjct: 225 MLGQENFGFIAIMNNFNYERLGMVAGSVGMMKACLEDSIAWAQERHTFGKPLIKHQVIRHKIADMSAKIDATEAYLNQICWLANEGEMPVAEVSKAKFFATKALEFCASEAMQILGGAGYLRGNRVERIYREVKVMAIGGGSEEIMRDLAVRQMGL 380 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122530.4639.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122530.4639.1 >prot_M-pyrifera_M_contig122530.4639.1 ID=prot_M-pyrifera_M_contig122530.4639.1|Name=mRNA_M-pyrifera_M_contig122530.4639.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=156bp MGEQDRGFLAIMNNFNYERLYMAAQMLGMSRRCLAESIAYAQTRETFGQPback to top mRNA from alignment at M-pyrifera_M_contig122530:3..473+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122530.4639.1 ID=mRNA_M-pyrifera_M_contig122530.4639.1|Name=mRNA_M-pyrifera_M_contig122530.4639.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=471bp|location=Sequence derived from alignment at M-pyrifera_M_contig122530:3..473+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122530:3..473+ >mRNA_M-pyrifera_M_contig122530.4639.1 ID=mRNA_M-pyrifera_M_contig122530.4639.1|Name=mRNA_M-pyrifera_M_contig122530.4639.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=936bp|location=Sequence derived from alignment at M-pyrifera_M_contig122530:3..473+ (Macrocystis pyrifera P11B4 male)back to top |