prot_M-pyrifera_M_contig122386.4616.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig122386.4616.1
Unique Nameprot_M-pyrifera_M_contig122386.4616.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length79
Homology
BLAST of mRNA_M-pyrifera_M_contig122386.4616.1 vs. uniprot
Match: A0A482RN90_9ARCH (CMP/dCMP-type deaminase domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RN90_9ARCH)

HSP 1 Score: 79.3 bits (194), Expect = 1.480e-15
Identity = 37/74 (50.00%), Postives = 51/74 (68.92%), Query Frame = 0
Query:    5 KVMHAEVHCLQQLPDIATAKGASVLVVELAADGVSYEEAVPCPMCSKGLVKTGVKIAYYSAIHGIDSISLSHKP 78
            +VMHAEVH L QLP    A+G    +VEL A+G+ YEEA+PCPMC   L + GV  A+YS+  GI ++ +S++P
Sbjct:  268 RVMHAEVHALIQLPTEQHARGTECYIVELDAEGIGYEEAIPCPMCQTALCQLGVAKAHYSSHSGIITVPVSYRP 341          
BLAST of mRNA_M-pyrifera_M_contig122386.4616.1 vs. uniprot
Match: A0A7S1NG78_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NG78_9EUGL)

HSP 1 Score: 70.1 bits (170), Expect = 2.590e-13
Identity = 33/77 (42.86%), Postives = 43/77 (55.84%), Query Frame = 0
Query:    3 RSKVMHAEVHCLQQLPDIATAKGASVLVVELAADGVSYEEAVPCPMCSKGLVKTGVKIAYYSAIHGIDSISLSHKPE 79
            + KVMHAEVHCL QLPD   A G ++ +V+       Y    PCP C+K L + GV   YYS   GI    ++H P+
Sbjct:   60 QKKVMHAEVHCLVQLPDPTAAVGGTMWIVQTDDHQAGYGSGFPCPSCTKALCRVGVGDVYYSTGEGIQHTKITHLPD 136          
BLAST of mRNA_M-pyrifera_M_contig122386.4616.1 vs. uniprot
Match: A0A812TD68_9DINO (Hypothetical protein n=6 Tax=Sar TaxID=2698737 RepID=A0A812TD68_9DINO)

HSP 1 Score: 65.5 bits (158), Expect = 1.270e-10
Identity = 32/78 (41.03%), Postives = 50/78 (64.10%), Query Frame = 0
Query:    2 SRSKVMHAEVHCLQQLPDIATAKGASVLVVELAADGVSYEEAVPCPMCSKGLVKTGVKIAYYSAIHGIDSISLSHKPE 79
            +R++V+HAEVHC QQL D+       +LVVEL   GV +++A PC MCS+G+ + GV    ++   GI   + +H+P+
Sbjct:  702 TRTRVLHAEVHCFQQLYDL-------ILVVELDGVGVGFDDAQPCRMCSRGVSRLGVAHILHTTQRGIAHRTTAHRPD 772          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122386.4616.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A482RN90_9ARCH1.480e-1550.00CMP/dCMP-type deaminase domain-containing protein ... [more]
A0A7S1NG78_9EUGL2.590e-1342.86Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A812TD68_9DINO1.270e-1041.03Hypothetical protein n=6 Tax=Sar TaxID=2698737 Rep... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.140.10coord: 2..76
e-value: 2.7E-6
score: 29.1
IPR002125Cytidine and deoxycytidylate deaminase domainPFAMPF00383dCMP_cyt_deam_1coord: 4..63
e-value: 2.0E-5
score: 24.4
IPR016193Cytidine deaminase-likeSUPERFAMILY53927Cytidine deaminase-likecoord: 5..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig122386contigM-pyrifera_M_contig122386:141..377 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig122386.4616.1mRNA_M-pyrifera_M_contig122386.4616.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig122386 123..377 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig122386.4616.1 ID=prot_M-pyrifera_M_contig122386.4616.1|Name=mRNA_M-pyrifera_M_contig122386.4616.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=79bp
MSRSKVMHAEVHCLQQLPDIATAKGASVLVVELAADGVSYEEAVPCPMCS
KGLVKTGVKIAYYSAIHGIDSISLSHKPE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002125CMP_dCMP_dom
IPR016193Cytidine_deaminase-like