prot_M-pyrifera_M_contig12230.4596.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12230.4596.1
Unique Nameprot_M-pyrifera_M_contig12230.4596.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length329
Homology
BLAST of mRNA_M-pyrifera_M_contig12230.4596.1 vs. uniprot
Match: D8LGZ7_ECTSI (DNA-directed RNA polymerase (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ7_ECTSI)

HSP 1 Score: 442 bits (1138), Expect = 2.140e-144
Identity = 254/402 (63.18%), Postives = 268/402 (66.67%), Query Frame = 0
Query:    1 QEFLVPAVIILKALRDTSDREIHERVLQGQKDNTFLAAHIEVREIARETKRDGAR-------------------------------------------WRAREEGYR-----------QVRQYVGRDARMHPGKAAMQVRDAKYMMKAFDRFSPAVGQGMATFLSTGNVTSSSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATTCR-------------SPDSLESILVSLGVAPAGTGAGDGATSLPHAFLPVALDGRVVGGGSEVTLRRVAAELRRLKVGGGGGRGAGVR------VDPTLEVAWVPPMKGGAGPYPGLFLNSGGARMCRLVLHLPSGKAEWIGPMEQQFMEVTSLA 329
            QEFLVP VIILKALRDTSDREIHERVLQGQKDNTFLAAH+EV  + R+ KR G                                             WR R    R            VRQ +GRDARM   KA MQVRDAK+M K  DRF  AVGQGM+TFLSTGNV S+SGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLAT C+             SP SLES+LV LGVAPAGTGAGDGA SLP +FLPV +DGRVVGGGSE TL+R                           VDPTLEV WVPPMKGGAGPYPGLFLNS GARMCR VLHL SG+ EWIGPM QQFME+  LA
Sbjct:  226 QEFLVPVVIILKALRDTSDREIHERVLQGQKDNTFLAAHVEV--LLRDGKRWGLHSRMESLAFLGSTFRTVLQAPATATDIELGKKVIDRVETGWCWPWRCRWNWPRCCLRALFVSLPAVRQLIGRDARMDQAKAVMQVRDAKHMAKYLDRFGSAVGQGMSTFLSTGNVISTSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATACKVVCGGGKAPPPAESPLSLESLLVRLGVAPAGTGAGDGALSLPSSFLPVLVDGRVVGGGSEATLKRAXXXXXXXXXXXXXXXXXXXXXXXXXXVDPTLEVGWVPPMKGGAGPYPGLFLNSEGARMCRPVLHLQSGRMEWIGPMAQQFMEIACLA 625          
BLAST of mRNA_M-pyrifera_M_contig12230.4596.1 vs. uniprot
Match: A0A835YVF9_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF9_9STRA)

HSP 1 Score: 335 bits (859), Expect = 1.260e-102
Identity = 193/392 (49.23%), Postives = 247/392 (63.01%), Query Frame = 0
Query:    2 EFLVPAVIILKALRDTSDREIHERVLQGQKDNTFLAAHIEV-----REIARETKRD-----GARWRA---------------------------REEGYRQ---------------------------VRQYVGRDARMHPGKAAMQVRDAKYMMKAFDRFSPAVGQGMATFLSTGNVTSSSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATTCRSPDSLESILVSLGVAPAGTGAGDGATSLPHAFLPVALDGRVVGGGSEVTLRRVAAELRRLKVGGGGGRGAGVRVDPTLEVAWVPPMKGGAGPYPGLFLNSGGARMCRLVLHLPSGKAEWIGPMEQQFMEVTSLA 329
            EFLVP ++++KALR+ SDRE++ERVL G   NT LAA +EV       +   T+       G+R+RA                           R E  ++                           VR  + + +R+   KA +  +D K ++K  DR+    GQ MA+FLSTGN+T+S+GLDLMQ SGFT+VAERIN LRYL+HFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDG+PCGLLNH+A  C+       ILVSLG+ PAG G+GDG+T+LP+ ++PV +DGRVVGGG+  TL+ V+  LRRLKV           V+PT+EVA +PPMK G+GP+PGLFL +G +RM R VL++   K EWIGP+EQ FME+  LA
Sbjct:  283 EFLVPVMVVIKALREISDRELYERVLAGDTANTQLAARLEVLLLDAARVGLHTREQCLAFLGSRFRAVGNRTDVHSDLALGIEIINRHVLVHLKRHEDKQETLLHMLKKPGHLFTMYMKEKLFDVLVKVRSELLKQSRIDVAKALLAAQDPKTIIKLVDRYGIGTGQRMASFLSTGNITTSTGLDLMQASGFTVVAERINMLRYLSHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGAPCGLLNHMAAECQ-------ILVSLGMTPAGIGSGDGSTALPYYYMPVMVDGRVVGGGTHETLQAVSRGLRRLKVA------TPPAVEPTMEVALLPPMKKGSGPFPGLFLFTGASRMIRPVLNIEFCKREWIGPLEQPFMEIACLA 661          
BLAST of mRNA_M-pyrifera_M_contig12230.4596.1 vs. uniprot
Match: W7TET2_9STRA (DNA-directed RNA polymerase subunit beta n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TET2_9STRA)

HSP 1 Score: 270 bits (690), Expect = 1.540e-78
Identity = 187/445 (42.02%), Postives = 230/445 (51.69%), Query Frame = 0
Query:    1 QEFLVPAVIILKALRDTSDREIHERVLQGQKDNTFLAAHIEVREIARET------KRD------GARWRA------------------------------------------------------------------------------REEGYRQVRQYVGRDARMHPGKAAMQVRDAKYMMKAFDRFSPAVGQGMATFLSTGNVTSSSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATTCR---SPDSLES----------ILVSLGVAPAGTGAGDGATSLPHAFLPVALDGRVVGGGSEVTLRRVAAELRRLK-----------VGGGGG---RGAGVRVDPTLEVAWVPPMKGGAGPYPGLFLNSGGARMCRLVLHLPSGKAEWIGPMEQQFMEVTSL 328
            QEFLVP V++LKALRD +D E++ER+  G +DNT+L   +E+  + RE+       R+      G+R+R                                                                                EE      Q + ++ R    +A    +D  Y  +   R    VG+  A  LSTGN+ S +G+D+MQVSG+TIVAER+NF R+L+HF+SVHRGQFFTTMKTTAVRKLLPES+GFLCPVHTPDGSPCGLLNH+AT  R     D L+           +LV LGV+P G G+ DGA  L    LPV LDGRVVGG      RRV   LRR K           V G      RG G RVD TLEVA++ P++GG  P PGLFL SG ARM R VLHL +G  E+IGPMEQ FMEV  L
Sbjct:  274 QEFLVPVVLVLKALRDLTDEELYERITLGDEDNTYLVTRVEM--LLRESHDFATFSRNKALSYLGSRFRTVLGLSNAHSDADCGRALVDRFVCIHLGHHADKQECLLHMLRKLYAFVQGRCRADNPDSFMNQELLLPGHLYSVFVKEKLEETLTAAFQQLRKECREDLARALAATQDEAYWAQLLGRHGAGVGKKAAYLLSTGNLVSRTGMDMMQVSGYTIVAERLNFFRFLSHFQSVHRGQFFTTMKTTAVRKLLPESFGFLCPVHTPDGSPCGLLNHVATAARVLCHEDRLQGGRVRGGLATDLLVGLGVSPGGAGSADGALVLSKDHLPVLLDGRVVGGAPVDICRRVVRALRRFKAVSAPPPNPDAVQGPDAQRLRGKG-RVDATLEVAFIHPVRGG--PAPGLFLFSGAARMVRPVLHLETGCVEYIGPMEQVFMEVALL 713          
BLAST of mRNA_M-pyrifera_M_contig12230.4596.1 vs. uniprot
Match: A0A8J9SE84_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SE84_PHATR)

HSP 1 Score: 255 bits (651), Expect = 1.160e-77
Identity = 145/273 (53.11%), Postives = 178/273 (65.20%), Query Frame = 0
Query:   73 DARMHPGKAAMQVRDAKYMMKAFDRF----SPAVGQGMATFLSTGNVTSSSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATT-----------CRSPDSLESILVSLGVAPAGTGA--GDGATSLPHAFLPVALDGRVVGGGSEVTLRRVAAELRRLKVGGGGGRGAGVRVDPTLEVAWVPPMKGGAGPYPGLFLNSGGARMCRLVLHLPSGKAEWIGPMEQQFMEVTSL 328
            D R    + + ++ DAKY  K  DR     S  +G+ +  FLSTGN+ S+SGLDLMQVSG+TIVAER+NFLRY AHFRSVHRGQFF  MKTTAVRKLLP+ WGFLCPVHTPDG PCGLL+HLA              +    L+ +L+SLGV P G G+  GDG     H  LPV++DGR+VGG S   L+ +AA LR+LKV           V PTLEV  VPP   GA PYPGL+L +  AR+ R VL+  SG  E+IGP+EQ +M++  L
Sbjct:  143 DLRKDFARTSAKLTDAKYWGKMVDRHAGKASGGIGKKVQHFLSTGNIVSTSGLDLMQVSGYTIVAERLNFLRYCAHFRSVHRGQFFMEMKTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHLALKSKVMAYPSRLDAKGMIDLDDLLLSLGVTPCGAGSRNGDGRIGSTHLHLPVSIDGRIVGGASPSVLKIIAAHLRKLKVDNP------PVVPPTLEVGLVPPGNPGA-PYPGLYLFTCAARLVRPVLNRASGHTEFIGPLEQGYMDIACL 408          
BLAST of mRNA_M-pyrifera_M_contig12230.4596.1 vs. uniprot
Match: A0A7S2V994_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V994_9STRA)

HSP 1 Score: 260 bits (665), Expect = 4.600e-75
Identity = 148/284 (52.11%), Postives = 186/284 (65.49%), Query Frame = 0
Query:   60 EEGYRQVRQYVGRDARMHPGKAAMQVRDAKYMMKAFDRFSP----AVGQGMATFLSTGNVTSSSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLA---------TTCRSPDS--LESILVSLGVAPAGTGAGDGATSLPHAFLPVALDGRVVGGGSEVTLRRVAAELRRLKVGGGGGRGAGVRVDPTLEVAWVPPMKGGAGPYPGLFLNSGGARMCRLVLHLPSGKAEWIGPMEQQFMEVTSL 328
            EE    +RQ +  D R    KA+  ++  +Y  K  DRFS      +G+ +A FLSTGNV SS+GLDL+QVSG+TIVAER+NFLRY +HFRSVHRGQFF  MKTTAVRKLLP+ WGFLCPVHTPDG PCGLL+HL+               D+  LE +L+SLGV  AG GA  G T   H+ LPV +DGR++GG S V  +R+A  LR LKV          RV  T+EVA++PP   G+ P+PGL+L +  ARM R VL   +GK E+IGP+EQ FM++  L
Sbjct:  463 EEVLSSIRQAITIDMRRSFSKASTNLQKVEYWSKMVDRFSQKSSGGIGKKVAHFLSTGNVISSTGLDLLQVSGYTIVAERLNFLRYCSHFRSVHRGQFFMEMKTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHLSLKGSVLAYEAKAEREDAPPLEDLLLSLGVTRAGAGAPGGRTVSSHSLLPVCIDGRIIGGASSVDCKRIAVCLRELKVE------TKPRVPATMEVAFIPPGNKGS-PFPGLYLFTLSARMVRPVLQRATGKTEYIGPLEQGFMDIACL 739          
BLAST of mRNA_M-pyrifera_M_contig12230.4596.1 vs. uniprot
Match: A0A7S3V7B4_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7B4_9STRA)

HSP 1 Score: 260 bits (664), Expect = 6.260e-75
Identity = 150/288 (52.08%), Postives = 186/288 (64.58%), Query Frame = 0
Query:   60 EEGYRQVRQYVGRDARMHPGKAAMQVRDAKYMMKAFDRFSPAVGQGMAT----FLSTGNVTSSSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLAT-----TCRSP------DSLESILVSLGVAPAGTG--AGDGATSLPHAFLPVALDGRVVGGGSEVTLRRVAAELRRLKVGGGGGRGAGVRVDPTLEVAWVPP-MKGGAGPYPGLFLNSGGARMCRLVLHLPSGKAEWIGPMEQQFMEVTSLA 329
            EE +  +R  + ++ R    K    ++D     K  DR+    G G+      FLSTGN+ SSSGLDLMQVSG+TIVAER+NFLRY AHFRSVHRGQFF  MKTTAVRKLLP+ WGFLCPVHTPDG PCGLL+H+A      T  +P       SL+ +L+ LG +P+G G  +GDG     H  +P+ LDGRV+GG S    + +AA+LR++KV           V PTLEVA +P  +KGG  PYPGLFL +G AR+ R VLH  SGK E IGPMEQ FM++  LA
Sbjct:  433 EEMFMAIRIGMLKEMRQDFSKILGNIQDTSTFSKIVDRYGNLAGGGIGKKVQHFLSTGNIISSSGLDLMQVSGYTIVAERLNFLRYCAHFRSVHRGQFFLEMKTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHMALKSIPMTYPAPLSGDNLQSLDDLLIKLGASPSGAGGISGDGRGPSIHTHVPICLDGRVIGGASAKRCKSIAAQLRQMKVEDN------ATVPPTLEVALIPKGVKGG--PYPGLFLFTGAARLVRPVLHRASGKEEMIGPMEQPFMDIACLA 712          
BLAST of mRNA_M-pyrifera_M_contig12230.4596.1 vs. uniprot
Match: A0A1Z5JIB2_FISSO (DNA-directed RNA polymerase subunit beta n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIB2_FISSO)

HSP 1 Score: 258 bits (658), Expect = 3.840e-74
Identity = 142/265 (53.58%), Postives = 174/265 (65.66%), Query Frame = 0
Query:   81 AAMQVRDAKYMMKAFDRFSP----AVGQGMATFLSTGNVTSSSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATTCR-----------SPDSLESILVSLGVAPAGTGA--GDGATSLPHAFLPVALDGRVVGGGSEVTLRRVAAELRRLKVGGGGGRGAGVRVDPTLEVAWVPPMKGGAGPYPGLFLNSGGARMCRLVLHLPSGKAEWIGPMEQQFMEVTSL 328
            +A    D +Y  K  DR+S      +G+ +  FLSTGN+ S++GLDLMQVSG+TIVAER+NFLRY AHFRSVHRGQFF  MKTTAVRKLLP+ WGFLCPVHTPDG PCGLL+HLA   +               LE +L+SLG++P G G+  GDG     H  LPV +DGR+VGG S  T ++++  LR LKV           V PTLE A+VPP   G+ PYPGLFL +G AR+ R VL   SGK E IGP+EQ FM++  L
Sbjct:  453 SAKLTHDQRYWEKMVDRYSGKGSGGIGKKVQHFLSTGNIVSTTGLDLMQVSGYTIVAERLNFLRYCAHFRSVHRGQFFMEMKTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHLALKSKIMTYPAKLNEKGMKDLEQLLISLGISPVGCGSSNGDGRAPSLHHLLPVCIDGRIVGGASASTCKKISVHLRSLKVS------EPPIVPPTLEAAYVPPGNRGS-PYPGLFLFTGAARLVRPVLQRSSGKIELIGPLEQAFMDIACL 710          
BLAST of mRNA_M-pyrifera_M_contig12230.4596.1 vs. uniprot
Match: K0RK47_THAOC (DNA-directed RNA polymerase subunit beta n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RK47_THAOC)

HSP 1 Score: 252 bits (644), Expect = 1.810e-73
Identity = 142/261 (54.41%), Postives = 175/261 (67.05%), Query Frame = 0
Query:   85 VRDAKYMMKAFDRF---SPAVGQGMATFLSTGNVTSSSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATTCRSP-----------DSLESILVSLGVAPAGTG--AGDGATSLPHAFLPVALDGRVVGGGSEVTLRRVAAELRRLKVGGGGGRGAGVRVDPTLEVAWVPP-MKGGAGPYPGLFLNSGGARMCRLVLHLPSGKAEWIGPMEQQFMEVTSL 328
            V  AK+  K  DR+   S  +G  ++ FLSTGN+ SS+GLDLMQVSG+TIVAE++NFLR+ AHFRSVHRGQFF  MKTTAVRKLLP+ WGFLCPVHTPDG PCGLL+H+A  C+             + L  +LV  GV P GTG  +GDG+ +  H  LPV +DGRVVGG S    + +A +LR LKV           V  TLEVA++PP MKGG  PYPGLFL +  AR+ R VL   +G+ E+IGPMEQ FM++  L
Sbjct:   66 VGQAKWWSKIVDRYGISSGGIGAKVSHFLSTGNIISSTGLDLMQVSGYTIVAEKLNFLRFCAHFRSVHRGQFFMEMKTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHMALKCQCMAFPAQKEGGDLEDLSELLVGWGVRPTGTGGESGDGSGTSSHTDLPVLVDGRVVGGASVKLCKSIAFQLRELKVA------EKPTVPQTLEVAFIPPGMKGG--PYPGLFLFTVAARVVRPVLQRATGRTEYIGPMEQPFMDIACL 318          
BLAST of mRNA_M-pyrifera_M_contig12230.4596.1 vs. uniprot
Match: B8CA95_THAPS (DNA-directed RNA polymerase subunit beta n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CA95_THAPS)

HSP 1 Score: 253 bits (646), Expect = 6.950e-73
Identity = 145/275 (52.73%), Postives = 179/275 (65.09%), Query Frame = 0
Query:   72 RDARMHPGKAAMQVRDAKYMMKAFDRF----SPAVGQGMATFLSTGNVTSSSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATTCR-----------SPDSLESILVSLGVAPAGTGA--GDGATSLPHAFLPVALDGRVVGGGSEVTLRRVAAELRRLKVGGGGGRGAGVRVDPTLEVAWVPP-MKGGAGPYPGLFLNSGGARMCRLVLHLPSGKAEWIGPMEQQFMEVTSL 328
            ++ RM   K    V   K+  K  DR+    S  +G+ +  FLSTGN+ SS+GLDLMQVSG+TIVAE++NFLR+ AHFRSVHRGQFF  MKTTAVRKLLP+ WGFLCPVHTPDG PCGLL+H+A  C+               L+ +L+S GV PAGTG   GDG T      LPV ++GRVVGG S    + +A +LR LKV           V PTLEVA++PP MKGG  PYPGLFL +  AR+ R VL   +G+ E+IGPMEQ FM++  L
Sbjct:  287 KEMRMDYTKLLTSVPQVKFWTKCVDRYGMLSSGGIGKKVQHFLSTGNIISSTGLDLMQVSGYTIVAEKLNFLRFCAHFRSVHRGQFFMEMKTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHMALKCQCMAYPADAKDGEMQDLDELLISWGVTPAGTGGEGGDGRTISNFTNLPVMVNGRVVGGASVKLCKSIAFQLRSLKVQ------EKPTVPPTLEVAYIPPGMKGG--PYPGLFLFTIAARVVRPVLQRATGRTEYIGPMEQPFMDIACL 553          
BLAST of mRNA_M-pyrifera_M_contig12230.4596.1 vs. uniprot
Match: A0A7S4JAV2_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAV2_9STRA)

HSP 1 Score: 253 bits (645), Expect = 2.870e-72
Identity = 141/288 (48.96%), Postives = 181/288 (62.85%), Query Frame = 0
Query:   60 EEGYRQVRQYVGRDARMHPGKAAMQVRDAKYMMKAFDRFS------PAVGQGMATFLSTGNVTSSSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATTCR-----------SPDSLESILVSLGVAPAGTGA--GDGATSLPHAFLPVALDGRVVGGGSEVTLRRVAAELRRLKVGGGGGRGAGVRVDPTLEVAWVPPMKGGAGPYPGLFLNSGGARMCRLVLHLPSGKAEWIGPMEQQFMEVTSL 328
            EE  + VR  + ++ R+   +A   V+D+++  +  DR++       ++G+ +  FLSTGN+ SS+GLDLMQVSG+TI+AER+NFLRY AHFRSVHRGQFF  M+TTAVRKLLP+ WGFLCPVHTPDG PCGLL+HLA  C                L+ +L+ +GV P GTG   GDG  +     LPV LDGRVVGG      + +A  LR LKV           V PTLEVA +P       PYPGL+L +G AR+ R VLH  +G+ E IGPMEQ FM++  L
Sbjct:  451 EESLQSVRLGLLKEMRVDFARAYSSVKDSRWWSRMVDRYAGIGGNASSIGKKVQHFLSTGNIVSSTGLDLMQVSGYTIIAERLNFLRYCAHFRSVHRGQFFMEMRTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHLALKCEVMSYPAETMGGKLQDLDELLIGMGVTPCGTGGAGGDGRGTPDRGHLPVCLDGRVVGGAPARLCKSIAIHLRELKVAE-----PEPIVPPTLEVAHIPSTGSDGEPYPGLYLFTGSARVVRPVLHRRTGRTERIGPMEQPFMDIACL 733          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12230.4596.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGZ7_ECTSI2.140e-14463.18DNA-directed RNA polymerase (Fragment) n=1 Tax=Ect... [more]
A0A835YVF9_9STRA1.260e-10249.23DNA-directed RNA polymerase subunit beta n=1 Tax=T... [more]
W7TET2_9STRA1.540e-7842.02DNA-directed RNA polymerase subunit beta n=2 Tax=M... [more]
A0A8J9SE84_PHATR1.160e-7753.11Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
A0A7S2V994_9STRA4.600e-7552.11DNA-directed RNA polymerase subunit beta n=1 Tax=A... [more]
A0A7S3V7B4_9STRA6.260e-7552.08DNA-directed RNA polymerase subunit beta n=1 Tax=C... [more]
A0A1Z5JIB2_FISSO3.840e-7453.58DNA-directed RNA polymerase subunit beta n=2 Tax=F... [more]
K0RK47_THAOC1.810e-7354.41DNA-directed RNA polymerase subunit beta n=1 Tax=T... [more]
B8CA95_THAPS6.950e-7352.73DNA-directed RNA polymerase subunit beta n=1 Tax=T... [more]
A0A7S4JAV2_9STRA2.870e-7248.96DNA-directed RNA polymerase subunit beta n=1 Tax=O... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037034RNA polymerase Rpb2, domain 2 superfamilyGENE3D3.90.1110.10coord: 1..95
e-value: 3.4E-9
score: 38.6
NoneNo IPR availableGENE3D3.90.1070.20coord: 195..296
e-value: 3.2E-13
score: 51.2
NoneNo IPR availablePANTHERPTHR20856:SF5DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA2coord: 84..326
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 3..325
IPR007645RNA polymerase Rpb2, domain 3PFAMPF04565RNA_pol_Rpb2_3coord: 132..195
e-value: 9.8E-30
score: 102.5
IPR009674DNA-directed RNA polymerase I subunit RPA2, domain 4PFAMPF06883RNA_pol_Rpa2_4coord: 238..302
e-value: 5.4E-14
score: 51.9
IPR015712DNA-directed RNA polymerase, subunit 2PANTHERPTHR20856DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2coord: 84..326

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12230contigM-pyrifera_M_contig12230:384..8393 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12230.4596.1mRNA_M-pyrifera_M_contig12230.4596.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12230 384..8393 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12230.4596.1 ID=prot_M-pyrifera_M_contig12230.4596.1|Name=mRNA_M-pyrifera_M_contig12230.4596.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=329bp
QEFLVPAVIILKALRDTSDREIHERVLQGQKDNTFLAAHIEVREIARETK
RDGARWRAREEGYRQVRQYVGRDARMHPGKAAMQVRDAKYMMKAFDRFSP
AVGQGMATFLSTGNVTSSSGLDLMQVSGFTIVAERINFLRYLAHFRSVHR
GQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATTCRSPDSL
ESILVSLGVAPAGTGAGDGATSLPHAFLPVALDGRVVGGGSEVTLRRVAA
ELRRLKVGGGGGRGAGVRVDPTLEVAWVPPMKGGAGPYPGLFLNSGGARM
CRLVLHLPSGKAEWIGPMEQQFMEVTSLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037034RNA_pol_Rpb2_2_sf
IPR007645RNA_pol_Rpb2_3
IPR009674Rpa2_dom_4
IPR015712DNA-dir_RNA_pol_su2