mRNA_M-pyrifera_M_contig12226.4593.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12226.4593.1 vs. uniprot
Match: D7G620_ECTSI (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G620_ECTSI) HSP 1 Score: 214 bits (546), Expect = 1.630e-64 Identity = 118/195 (60.51%), Postives = 140/195 (71.79%), Query Frame = 1
Query: 10 GLAIAYVHFRVKPGASAGIARFYRDVFGADAEEIA----------VSTPSGE-TCSL---GDGVDG----------DNQAAGTVVRVGPVQRLAFVEGR-EAL--PEYDGHHICVYLTDEGFRRSFLEADKRGLVFVNPRPNYGRADTLESALEEKQFRVKNMVDPATGELLHVLEHEVRCVSHPSYPVGRDVSA 513
GL I+YV FRV+PG +AGIARFYR++FGA+A+E+ SGE CS+ GD G + VVRVGPVQ LAFVE EAL EYDGHHICVYL +EGFRRSF EA++RGLVFVNPR N+G+ADTLE ALEEKQ+R+K++VDPATGELLHVLEHE+R +SHPSYPV RD+SA
Sbjct: 237 GLGISYVSFRVRPGTAAGIARFYRELFGAEAQEMGGXXXXXXXXXXXXSSGEDVCSVTQEGDSGKGLRCSTATEADKRRGTAAVVRVGPVQHLAFVEEEDEALLQQEYDGHHICVYLPEEGFRRSFEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSYPVARDLSA 431
BLAST of mRNA_M-pyrifera_M_contig12226.4593.1 vs. uniprot
Match: A0A0L0FRU0_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FRU0_9EUKA) HSP 1 Score: 109 bits (273), Expect = 3.480e-25 Identity = 68/167 (40.72%), Postives = 92/167 (55.09%), Query Frame = 1
Query: 13 LAIAYVHFRVKPGASAGIARFYRDVFGADAEEIAVSTPSGETCSLGDGV-------DGDNQAAGTVVRVGPVQRLAFVEGREALPEYDGHHICVYLTD--EGFRRSFLEADKRGLVFVNPRPNYGRADTLESALEEKQFRVKNMVDPATGELLHVLEHEVRCVSHPS 486
+ + VHF V GA+ I FY VFGA ET S+GDG DG Q Q L F E ++LP+YDGHHI +YL + EG+ +++ + LV++NPR + + TLE+A E+QFR KN+VD TGE ++ LEHEVRC +HPS
Sbjct: 179 IGLECVHFIVPKGAAHRIGAFYNHVFGA------------ETMSMGDGATQVAINWDGRMQ-----------QSLIFSEVSDSLPDYDGHHIAIYLGNGPEGYEKAYNNVEGLNLVWINPRFS-DKVSTLETAKSERQFRFKNIVDIDTGETIYELEHEVRCSTHPS 321
BLAST of mRNA_M-pyrifera_M_contig12226.4593.1 vs. uniprot
Match: A0A1F4BFL3_9PROT (VOC domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BFL3_9PROT) HSP 1 Score: 100 bits (248), Expect = 7.600e-22 Identity = 68/160 (42.50%), Postives = 84/160 (52.50%), Query Frame = 1
Query: 13 LAIAYVHFRVKPGASAGIARFYRDVFGADAEEIAVSTPSGETCSLGDGVDGDNQAAGTVVRVGPVQRLAFVEGREALPEYDGHHICVYLTD-EGFRRSFLEADKRGLVFVNPRPNYGRADTLESALEEKQFRVKNMVDPATGELLHVLEHEVRCVSHPSY 489
LAIAYV V G++ GIARFY+DV GA A +DG A V G QRL F E LPEYDGHH+ VY+ D G R +E RGLV T ES+ E Q+R +++VDPA+G+ L LEHEVR ++HP Y
Sbjct: 136 LAIAYVQLDVPAGSAPGIARFYQDVLGAHAA-----------------LDGGLGGATAAVSTGAAQRLRFRETARPLPEYDGHHVQVYVADFSGPHRRLME---RGLV------------TEESS--EHQYRFRDIVDPASGKPLFTLEHEVRSLTHPLY 261
BLAST of mRNA_M-pyrifera_M_contig12226.4593.1 vs. uniprot
Match: A0A6G0XGJ1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XGJ1_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.340e-21 Identity = 59/166 (35.54%), Postives = 87/166 (52.41%), Query Frame = 1
Query: 1 SPHGLAIAYVHFRVKPGASAGIARFYRDVFGADAEEIAVSTPSGETCSLGDGVDGDNQAAGTVVRVGPVQRLAFVEGREALPEYDGHHICVYLTDEGFRRSFLEADKRGLVFVNPRPNYG-RADTLESALEEKQFRVKNMVDPATGELLHVLEHEVRCVSHPSYPV 495
S G + Y+ F +PG ++GIARFY+ GA + + + + CS+ GP+Q+L F E + L YDGHHIC+Y+ + F S+ + L + P +G R DT E + +QFR + DP +GELL LEHEVR V+HP +P+
Sbjct: 154 SSMGDGVPYLKFLARPGTASGIARFYQRYLGATCKVLPTRSQNRRVCSI---------------TCGPLQKLLFEESDDDLLPYDGHHICLYI--DNFEASYKQIAASRLNWNTPL--FGDRCDTWELTQKHQQFRFLRVEDPESGELLLELEHEVRTVAHPRWPM 300
BLAST of mRNA_M-pyrifera_M_contig12226.4593.1 vs. uniprot
Match: A0A7S1NL54_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NL54_9EUGL) HSP 1 Score: 101 bits (252), Expect = 1.420e-21 Identity = 62/167 (37.13%), Postives = 84/167 (50.30%), Query Frame = 1
Query: 10 GLAIAYVHFRVKPGASAGIARFYRDVFGADAEEIAVSTPSGETCSLGDGVDGDNQAAGTVVRVGPVQRLAFVEGREALPEYDGHHICVYLTD-EGFRRSFLEADKRGLVFVNPRPNYGRADTLESALEEK--QFRVKNMVDPATGELLHVLEHEVRCVSHPSYPVGR 501
G +A + R KPGA+AGI RFYR F A+ E + V+ G Q ++F EG EALP YDGHH+ +Y+ + F+ +F D GLV+VN R + A T S +K QFR+ + DP LLH LEHE+R +H + P R
Sbjct: 307 GTGMAGLELRCKPGAAAGIGRFYRHYFEAEVTE---------------------EPGAVTVKCGTYQTISFCEGDEALPPYDGHHMAMYMASMQAFQDTFKRLDADGLVWVNTR--FSDASTTLSLAVDKWQQFRILEIRDPLDKSLLHTLEHEIRAPTHEACPFTR 450
BLAST of mRNA_M-pyrifera_M_contig12226.4593.1 vs. uniprot
Match: A0A024UVA5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UVA5_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 5.090e-21 Identity = 63/164 (38.41%), Postives = 85/164 (51.83%), Query Frame = 1
Query: 10 GLAIAYVHFRVKPGASAGIARFYRDVFGADAEEIAVSTPSGETCSLGDGVDGDNQAAGTVVRVGPVQRLAF--VEGREALPEYDGHHICVYLTDEGFRRSFLEADKRGLVFVNPRPNYGRADTLESALEEKQFRVKNMVDPATGELLHVLEHEVRCVSHPSYPV 495
G+ +AY+ F V+ G + GIARFY + GA TC++ DG A V G +QRL F V L YDGHHIC+Y+++ F SF +R L + NP R D+ A + Q+R+ +VDPAT LL LEHE+R VSH P+
Sbjct: 166 GMGMAYIKFFVRSGIALGIARFYEEFLGA-------------TCTMEKSSDGQVVCA---VECGSIQRLLFEEVSSDVQLQPYDGHHICIYISE--FESSFFHLHERQLTWNNPLFE-DRCDSWAEAEKHNQYRILRVVDPATETLLMELEHEIRPVSHSRCPL 310
BLAST of mRNA_M-pyrifera_M_contig12226.4593.1 vs. uniprot
Match: A0A7S0LFS2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LFS2_9EUKA) HSP 1 Score: 96.3 bits (238), Expect = 5.190e-20 Identity = 61/162 (37.65%), Postives = 84/162 (51.85%), Query Frame = 1
Query: 10 GLAIAYVHFRVKPGASAGIARFYRDVFGADAEEIAVSTPS-GETCSLGDGVDGDNQAAGTVVRVGPVQRLAFVEG---REALPEYDGHHICVYLTDEGFRRSFLEADKRGLVFVNPRPNYGRADTLESALEEKQFRVKNMVDPATGELLHVLEHEVRCVSHP 483
GL + +V V P +AGI RFY ++F E A+ T G C + V +G Q L FVE E LP YDG H+ +Y+ F R++ L++ NPR + DTLE AL +FR+ ++VDPA+GE L LEHEVR ++HP
Sbjct: 199 GLGLRFVRVNVPPATAAGICRFYSEIF----ESAALLTERHGRRCCI--------------VPIGHHQSLEFVEQTARNEPLPPYDGTHVAIYVNH--FERAYRRLASFNLLWNNPRFPHLTYDTLEDALHHHEFRLLHVVDPASGERLFTLEHEVRSLAHP 340
BLAST of mRNA_M-pyrifera_M_contig12226.4593.1 vs. uniprot
Match: A0A4P7D4K3_9BURK (Glyoxalase/bleomycin resistance/dioxygenase family protein n=2 Tax=Paraburkholderia TaxID=1822464 RepID=A0A4P7D4K3_9BURK) HSP 1 Score: 91.7 bits (226), Expect = 1.180e-18 Identity = 61/159 (38.36%), Postives = 79/159 (49.69%), Query Frame = 1
Query: 13 LAIAYVHFRVKPGASAGIARFYRDVFGADAEEIAVSTPSGETCSLGDGVDGDNQAAGTVVRVGPVQRLAFVEGREALPEYDGHHICVYLTDEGFRRSFLEADKRGLVFVNPRPNYGRADTLESALEEKQFRVKNMVDPATGELLHVLEHEVRCVSHPSY 489
L IAYVH V G + IA FYR+VFG A+ GDG+ QA V+ +G Q+L F E R A+P+YDGHHI +Y+ + F + +RGL YG E Q+R N+VDP +G LEHEVR + HP Y
Sbjct: 140 LGIAYVHLDVPAGCAGSIAAFYREVFGVPAD-----------VREGDGLQ---QA---VIAIGTHQQLVFAETRAAIPDYDGHHIQIYVAN--FSGPYARLAQRGLT-------YGE--------EAHQYRFANLVDPVSGAHCFTLEHEVRSLRHPLY 264
BLAST of mRNA_M-pyrifera_M_contig12226.4593.1 vs. uniprot
Match: A0A813ECT5_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813ECT5_POLGL) HSP 1 Score: 89.7 bits (221), Expect = 1.310e-17 Identity = 58/171 (33.92%), Postives = 88/171 (51.46%), Query Frame = 1
Query: 13 LAIAYVHFRVKPGASAGIARFYRDVFGADAEEIAVSTPSGETCSLGDGVDGDNQAAGTVVRVGPVQRLAFVE--GREALPEYDGHHICVYLTDEGFRRSFLEADKRGLVFVNPRPNYGRADTLESALEEKQFRVKNMVDPATGELLHVLEHEVRCVSHPSYPVGRDVSAKK 519
L I Y+ +AG+ R Y VFG +A C+ G GV+ V +G Q L + E +A+P YDG+H+ +Y+ GF ++ +A GLV+ NPR + R D+L+ A+ +FR+ +VDPA G+ L +EHEVR +SHP + S+ K
Sbjct: 201 LGIPYIRLLCPASTAAGLCRLYAAVFGTEAT----------LCTGGSGVE-------CWVPIGAHQWLVYEEVPTGQAVP-YDGYHVAIYIN--GFVEAYRQAQSLGLVWNNPRFPHLRYDSLDEAVGHSEFRILRLVDPANGQELISMEHEVRALSHPGFSYSLPKSSLK 351
BLAST of mRNA_M-pyrifera_M_contig12226.4593.1 vs. uniprot
Match: A0A1F4EZH7_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4EZH7_9PROT) HSP 1 Score: 85.9 bits (211), Expect = 1.550e-16 Identity = 61/163 (37.42%), Postives = 82/163 (50.31%), Query Frame = 1
Query: 4 PHGLAIAYVHFRVKPGASAGIARFYRDVFGADAEEIAVSTPSGETCSLGDGVDGDNQAAGTVVRVGPVQRLAFVEGREALPEYDGHHICVYLTD-EGFRRSFLEADKRGLVFVNPRPNYGRADTLESALEEKQFRVKNMVDPATGELLHVLEHEVRCVSHPSY 489
P LA+AYV F V G + GIARFY + A A +V+ G A VRVG Q L F E +P++DGHHI +Y+ D G R LE RGL+ ++E+ + ++R N+VDPA+ LL+ LEHEVR + HP Y
Sbjct: 132 PTELAMAYVEFDVPAGTTDGIARFYSGIMAAPA---SVAKRYG--------------APAADVRVGRNQHLYFTEAEATVPDWDGHHIQIYIADFSGPHRKLLE---RGLI------------SMEA--NQHEWRFTNIVDPASDRLLYRLEHEVRSMKHPLY 260 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12226.4593.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12226.4593.1 >prot_M-pyrifera_M_contig12226.4593.1 ID=prot_M-pyrifera_M_contig12226.4593.1|Name=mRNA_M-pyrifera_M_contig12226.4593.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp SPHGLAIAYVHFRVKPGASAGIARFYRDVFGADAEEIAVSTPSGETCSLGback to top mRNA from alignment at M-pyrifera_M_contig12226:1822..5071- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12226.4593.1 ID=mRNA_M-pyrifera_M_contig12226.4593.1|Name=mRNA_M-pyrifera_M_contig12226.4593.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3250bp|location=Sequence derived from alignment at M-pyrifera_M_contig12226:1822..5071- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12226:1822..5071- >mRNA_M-pyrifera_M_contig12226.4593.1 ID=mRNA_M-pyrifera_M_contig12226.4593.1|Name=mRNA_M-pyrifera_M_contig12226.4593.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1044bp|location=Sequence derived from alignment at M-pyrifera_M_contig12226:1822..5071- (Macrocystis pyrifera P11B4 male)back to top |